FFCP PHASE1:Mm9::chr16:22857587..22857649,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=70573|HGNC=|UniProt=Q640P7|association_with_transcript=0bp_to_ENSMUST00000004576,NM_001081368,uc007ysk.1,uc007ysl.1,uc007ysm.1,uc007ysn.1_5end|description=CAGE_peak_1_at_Tbccd1_5end|id=chr16:22857587..22857649,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.33e-07!102;UBERON:0000924!1.33e-07!102;UBERON:0006601!1.33e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.51e-07,95;UBERON:0000924,3.51e-07,95;UBERON:0006601,3.51e-07,95|phase1_expression=19.8584570409945,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,4.53274034162102,5.60670337429262,17.6898953114959,1.83025338797167,2.10658073689794,12.8413476169129,14.2792164601652,21.7424927012631,18.0086028983135,19.3203661853084,21.8673288781012,22.3859801001007,24.4483178152634,23.9950258810043,19.0975343309114,11.9911039113008,17.7730802649585,21.9407822876706,5.59973479776923,6.65286915094793,2.29692785646008,2.15380998079537,4.09395342103189,3.6104449696711,5.29263272495855,5.54326276638262,15.8757668364908,13.5314253268605,15.8481681015439,6.93243887403059,4.98703936075477,7.55426618170766,11.7188856606334,17.1893775795236,17.2762835511353,11.7646297606203,8.87959130445979,5.82612423637384,25.8088476849933,26.5607559795128,13.5824596599644,7.04152209913235,16.5699118849139,14.7189742432096,21.1928589990969,13.9986421625363,14.3752564364972,13.5903910906766,7.97898356212479,13.4437519656986,13.3774906738692,26.0745430344269,14.9544906760458,10.5204559646991,16.398720357433,19.0149421051854,5.08266798103698,6.22506357277798,8.09909745553259,3.9554654502679,15.6305625288142,5.69240209984969,8.06858441175265,13.6870288247191,12.1505344498522,13.4607975264884,11.9973413449598,11.9269012113871,15.3113499018693,11.9806838772795,10.1114066527102,11.0115880999389,14.939418555967,17.2039317246993,13.7161739239402,12.4423195299277,12.5019208933622,12.8424179540635,16.3201156909187,14.9742282821274,13.5529149317887,13.5253096759148,13.047961207771,16.2811315666346,20.2531781086185,17.102004833399,7.74381489283248,4.0798280022465,6.47643829965381,5.84798775702902,6.72040330646003,11.7973312910672,17.3838929029619,19.2241643406123,15.1936017039446,18.7321748302985,17.9657068380045,7.64415719119937,0,10.8245520505607,5.06719730950197,8.08839112023653,6.8510327831436,33.6619248741323,27.6102378660574,13.8788261412909,17.354532263792,17.2961622942044,18.38816214742,17.4031286560843,15.3313241422204,20.517182321953,25.1602881040646,28.307537662396,11.3236794963186,11.4837589599405,20.3647606316793,13.0474232852686,23.7152445579353,21.154117388159,6.38642638021478,12.7004031976275,10.1983464268879,12.8340929343795,23.3673397471523,22.4175295381127,8.54449594367478,20.8589184230732,15.0872119824895,19.3242881440391,18.8199865158599,11.4060087512354,18.9098595327341,28.8103944614389,22.9381622916257,26.5445703643916,20.0014830857121,24.8485739131382,22.4550178575215,21.9757892258789,24.5978342946912,18.5529414628263,24.8355235909455,25.6525911590082,26.0966390631591,23.2255483896412,20.3852031157645,21.1315909411454,14.626590993931,18.108828003899,15.9227413454795,19.6619692447706,14.1541348913093,9.66155897945015,13.8774267598786,14.7751417788091,18.0062061461015,19.8865577891577,14.5605531493079,13.2669717083145,14.8821724640261,11.267482858784,14.5956677958962,10.6963902443762,15.1034066952768,12.8088719082452,12.8655988934292,16.0271584162467,15.7021509949635,24.3936340334388,17.1850702673405,4.29544417878937,6.08236303326152,20.2623838008472,22.9914305141834,18.0414445850931,15.1262643467507,14.8993289376063,12.1744400712038,2.84717436926707,10.0466362381647,12.0640900224129,11.5394753783867,12.0877734013854,6.29173586057955,6.26800344636613,7.96565093017469,21.6221407086513,16.9087798662399,18.0332377076929,17.9213168503877,18.6194387680921,13.8868923382831,14.9238227613247,16.8275568696746,14.7578804170892,12.4631135561019,8.59712618552732,19.6877224744991,23.193961423358,18.2138311031732,15.2145091041377,16.1588697034119,11.4581633301639,14.3848068725405,12.1601420081277,8.51140380883053,11.5014565221884,10.7920874823866,8.7370548472077,8.33510297225469,10.0462551572271,6.75420929908714,19.9533445379933,15.9172785887207,21.3484119139054,21.2181357218985,23.9384053254272,19.4307258632506,20.7097967570832,12.4885534628991,17.0245955634686,18.3815692408483,13.8725648732014,20.4829143394672,17.0958132047237,19.9615700842486,25.6345182696763,15.2293591469239,19.1788066477424,20.6952559728549,22.9587343682543,19.6915633474901,15.4098848654075,12.876017287423,20.8235424814729,22.645447169205,26.4970779211343,25.8086301788756,28.5182302825464,18.6830510320629,26.717506310543,24.5494920645502,23.7172666767914,19.921921618152,27.8202567008207,14.9575107080494,13.0309567482861,26.2302495526331,31.8588332015911,21.6074766177933,17.5347663039556,20.7465587731488,19.1946230372502,19.3684143204674,17.8315522286073,24.7202936044704,17.8248689192361,22.7546465713787,18.9753495434998,16.5016869197099,35.7461586041477,20.3469036255381,21.3441828241545,19.5046701878749,25.3596534108451,16.9450376721967,17.6067452044269,13.3964577610424,21.3551254337976,27.5381692122966,20.2886126210565,13.8504452470843,19.2142667768128,15.9226121810331,13.2503301843481,16.7423717739962,5.53813589596716,23.5490133553347,23.5801815501037,16.3045625690946,22.7789268664745,22.6042148405629,27.4755397719261,19.4461447225544,6.4591803397665,10.3564074719507,7.73919853304773,14.3200592702267,21.6690155603078,23.3817387195876,16.7408278273792,18.8179466413022,18.1240927909327,13.4864346384821,12.8939390931524,10.7319936213452,6.22151871800606,24.853572523477,8.45539408026285,19.4371509857172,17.8695169693665,18.2784117043405,18.3406949338378,22.3022085647827,20.0680878084239,15.1037086418982,21.4961656072707,13.7702948870823,7.77681016896237,17.3806116345498,15.0016659314722,19.1042380326579,16.49994451818,14.143108957731,16.0931897372825,16.2263856851958,16.0981584620289,15.044001042274,13.488604777935,14.3173182894314,11.5000299272908,11.2567854719185,14.4927358705145,15.1909357022192,18.8688060367955,16.2382080463151,16.1169231709515,25.6942160062813,25.9001816122631,23.2602562819427,21.2224695288275,23.0723167856267,24.8490810751509,23.476587061866,24.6345070778941,16.8416118696814,23.9778881919725,19.6402413321322,21.6007200074178,23.4167025676595,21.7508356312418,18.6393712230655,19.0968719554885,28.7297908848742,19.6343646617254,21.8796045361465,17.6075056607505,9.74370594785075,15.1127774905098,14.4224540067226,17.9714757371417,16.6780159764106,12.1670063947315,17.7308760902912,11.9861129561449,10.8202507564229,13.3250287977023,13.3362233559261,10.8931266388164,10.8029163459675,11.9504911232959,15.8974833745149,11.3146853287187,14.5530161050657,11.921809497366,13.8079095800712,14.3046258231303,13.6229518705599,14.0854539112035,16.0472523977084,10.4569167661314,16.8342681497322,13.8802971205284,9.85044823755635,16.3692417267876,11.1554525653896,15.6254354894725,12.2407183189594,18.9484602840781,16.545071161719,14.7292015693009,14.7796250810075,18.5494268496337|short_description=p1@Tbccd1}} | ||
|EntrezGene=70573 | |||
|HGNC= | |||
|UniProt=Q640P7 | |||
|association_with_transcript=0bp_to_ENSMUST00000004576,NM_001081368,uc007ysk.1,uc007ysl.1,uc007ysm.1,uc007ysn.1_5end | |||
|description=CAGE_peak_1_at_Tbccd1_5end | |||
|id=chr16:22857587..22857649,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.33e-07!102;UBERON:0000924!1.33e-07!102;UBERON:0006601!1.33e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.51e-07,95;UBERON:0000924,3.51e-07,95;UBERON:0006601,3.51e-07,95 | |||
|phase1_expression=19.8584570409945,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,4.53274034162102,5.60670337429262,17.6898953114959,1.83025338797167,2.10658073689794,12.8413476169129,14.2792164601652,21.7424927012631,18.0086028983135,19.3203661853084,21.8673288781012,22.3859801001007,24.4483178152634,23.9950258810043,19.0975343309114,11.9911039113008,17.7730802649585,21.9407822876706,5.59973479776923,6.65286915094793,2.29692785646008,2.15380998079537,4.09395342103189,3.6104449696711,5.29263272495855,5.54326276638262,15.8757668364908,13.5314253268605,15.8481681015439,6.93243887403059,4.98703936075477,7.55426618170766,11.7188856606334,17.1893775795236,17.2762835511353,11.7646297606203,8.87959130445979,5.82612423637384,25.8088476849933,26.5607559795128,13.5824596599644,7.04152209913235,16.5699118849139,14.7189742432096,21.1928589990969,13.9986421625363,14.3752564364972,13.5903910906766,7.97898356212479,13.4437519656986,13.3774906738692,26.0745430344269,14.9544906760458,10.5204559646991,16.398720357433,19.0149421051854,5.08266798103698,6.22506357277798,8.09909745553259,3.9554654502679,15.6305625288142,5.69240209984969,8.06858441175265,13.6870288247191,12.1505344498522,13.4607975264884,11.9973413449598,11.9269012113871,15.3113499018693,11.9806838772795,10.1114066527102,11.0115880999389,14.939418555967,17.2039317246993,13.7161739239402,12.4423195299277,12.5019208933622,12.8424179540635,16.3201156909187,14.9742282821274,13.5529149317887,13.5253096759148,13.047961207771,16.2811315666346,20.2531781086185,17.102004833399,7.74381489283248,4.0798280022465,6.47643829965381,5.84798775702902,6.72040330646003,11.7973312910672,17.3838929029619,19.2241643406123,15.1936017039446,18.7321748302985,17.9657068380045,7.64415719119937,0,10.8245520505607,5.06719730950197,8.08839112023653,6.8510327831436,33.6619248741323,27.6102378660574,13.8788261412909,17.354532263792,17.2961622942044,18.38816214742,17.4031286560843,15.3313241422204,20.517182321953,25.1602881040646,28.307537662396,11.3236794963186,11.4837589599405,20.3647606316793,13.0474232852686,23.7152445579353,21.154117388159,6.38642638021478,12.7004031976275,10.1983464268879,12.8340929343795,23.3673397471523,22.4175295381127,8.54449594367478,20.8589184230732,15.0872119824895,19.3242881440391,18.8199865158599,11.4060087512354,18.9098595327341,28.8103944614389,22.9381622916257,26.5445703643916,20.0014830857121,24.8485739131382,22.4550178575215,21.9757892258789,24.5978342946912,18.5529414628263,24.8355235909455,25.6525911590082,26.0966390631591,23.2255483896412,20.3852031157645,21.1315909411454,14.626590993931,18.108828003899,15.9227413454795,19.6619692447706,14.1541348913093,9.66155897945015,13.8774267598786,14.7751417788091,18.0062061461015,19.8865577891577,14.5605531493079,13.2669717083145,14.8821724640261,11.267482858784,14.5956677958962,10.6963902443762,15.1034066952768,12.8088719082452,12.8655988934292,16.0271584162467,15.7021509949635,24.3936340334388,17.1850702673405,4.29544417878937,6.08236303326152,20.2623838008472,22.9914305141834,18.0414445850931,15.1262643467507,14.8993289376063,12.1744400712038,2.84717436926707,10.0466362381647,12.0640900224129,11.5394753783867,12.0877734013854,6.29173586057955,6.26800344636613,7.96565093017469,21.6221407086513,16.9087798662399,18.0332377076929,17.9213168503877,18.6194387680921,13.8868923382831,14.9238227613247,16.8275568696746,14.7578804170892,12.4631135561019,8.59712618552732,19.6877224744991,23.193961423358,18.2138311031732,15.2145091041377,16.1588697034119,11.4581633301639,14.3848068725405,12.1601420081277,8.51140380883053,11.5014565221884,10.7920874823866,8.7370548472077,8.33510297225469,10.0462551572271,6.75420929908714,19.9533445379933,15.9172785887207,21.3484119139054,21.2181357218985,23.9384053254272,19.4307258632506,20.7097967570832,12.4885534628991,17.0245955634686,18.3815692408483,13.8725648732014,20.4829143394672,17.0958132047237,19.9615700842486,25.6345182696763,15.2293591469239,19.1788066477424,20.6952559728549,22.9587343682543,19.6915633474901,15.4098848654075,12.876017287423,20.8235424814729,22.645447169205,26.4970779211343,25.8086301788756,28.5182302825464,18.6830510320629,26.717506310543,24.5494920645502,23.7172666767914,19.921921618152,27.8202567008207,14.9575107080494,13.0309567482861,26.2302495526331,31.8588332015911,21.6074766177933,17.5347663039556,20.7465587731488,19.1946230372502,19.3684143204674,17.8315522286073,24.7202936044704,17.8248689192361,22.7546465713787,18.9753495434998,16.5016869197099,35.7461586041477,20.3469036255381,21.3441828241545,19.5046701878749,25.3596534108451,16.9450376721967,17.6067452044269,13.3964577610424,21.3551254337976,27.5381692122966,20.2886126210565,13.8504452470843,19.2142667768128,15.9226121810331,13.2503301843481,16.7423717739962,5.53813589596716,23.5490133553347,23.5801815501037,16.3045625690946,22.7789268664745,22.6042148405629,27.4755397719261,19.4461447225544,6.4591803397665,10.3564074719507,7.73919853304773,14.3200592702267,21.6690155603078,23.3817387195876,16.7408278273792,18.8179466413022,18.1240927909327,13.4864346384821,12.8939390931524,10.7319936213452,6.22151871800606,24.853572523477,8.45539408026285,19.4371509857172,17.8695169693665,18.2784117043405,18.3406949338378,22.3022085647827,20.0680878084239,15.1037086418982,21.4961656072707,13.7702948870823,7.77681016896237,17.3806116345498,15.0016659314722,19.1042380326579,16.49994451818,14.143108957731,16.0931897372825,16.2263856851958,16.0981584620289,15.044001042274,13.488604777935,14.3173182894314,11.5000299272908,11.2567854719185,14.4927358705145,15.1909357022192,18.8688060367955,16.2382080463151,16.1169231709515,25.6942160062813,25.9001816122631,23.2602562819427,21.2224695288275,23.0723167856267,24.8490810751509,23.476587061866,24.6345070778941,16.8416118696814,23.9778881919725,19.6402413321322,21.6007200074178,23.4167025676595,21.7508356312418,18.6393712230655,19.0968719554885,28.7297908848742,19.6343646617254,21.8796045361465,17.6075056607505,9.74370594785075,15.1127774905098,14.4224540067226,17.9714757371417,16.6780159764106,12.1670063947315,17.7308760902912,11.9861129561449,10.8202507564229,13.3250287977023,13.3362233559261,10.8931266388164,10.8029163459675,11.9504911232959,15.8974833745149,11.3146853287187,14.5530161050657,11.921809497366,13.8079095800712,14.3046258231303,13.6229518705599,14.0854539112035,16.0472523977084,10.4569167661314,16.8342681497322,13.8802971205284,9.85044823755635,16.3692417267876,11.1554525653896,15.6254354894725,12.2407183189594,18.9484602840781,16.545071161719,14.7292015693009,14.7796250810075,18.5494268496337 | |||
|short_description=p1@Tbccd1 | |||
}} | |||
Revision as of 12:13, 13 September 2013
| Short description: | p1@Tbccd1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tbccd1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000004576, NM_001081368, uc007ysk.1, uc007ysl.1, uc007ysm.1, uc007ysn.1_5end |
| EntrezGene: | Tbccd1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectoderm-derived structure | 3.51e-07 | 95 |
| ectoderm | 3.51e-07 | 95 |
| presumptive ectoderm | 3.51e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
