FFCP PHASE1:Hg19::chr4:90117667..90117687,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:90117667..90117687,+|id=chr4:90117667..90117687,+|ontology_enrichment_celltype=CL:1000306!4.98e-07!4;CL:0002547!4.98e-07!4;CL:0000223!8.62e-07!59|ontology_enrichment_celltype_v019=CL:0000333;1.90e-10;5!CL:0002178;3.55e-08;3!CL:0000167;4.71e-07;1!CL:0000164;4.71e-07;1!CL:0000502;4.71e-07;1!CL:0000172;4.71e-07;1!CL:0000173;4.71e-07;1|ontology_enrichment_celltype_v019_2=CL:0002178,4.25e-08,3;CL:0000167,4.58e-07,1;CL:0000164,4.58e-07,1;CL:0000502,4.58e-07,1;CL:0000172,4.58e-07,1;CL:0000173,4.58e-07,1;CL:0002351,4.58e-07,1;CL:0000066,5.76e-07,253|ontology_enrichment_development_v019=CL:0002351;4.71e-07;1|ontology_enrichment_disease=DOID:0050687!5.92e-16!143;DOID:162!3.52e-14!235;DOID:14566!1.67e-13!239;DOID:305!2.85e-10!106;DOID:3119!3.94e-08!14;DOID:0050686!9.91e-07!137|ontology_enrichment_disease_v019=DOID:169;5.41e-15;6!DOID:171;4.96e-09;10!DOID:299;4.18e-07;25!DOID:4430;4.71e-07;1!DOID:0050619;9.47e-07;1!DOID:1357;9.47e-07;1|ontology_enrichment_disease_v019_2=DOID:0050687,5.13e-18,143;DOID:162,1.53e-15,235;DOID:14566,4.37e-15,239;DOID:169,6.60e-15,6;DOID:305,6.82e-14,106;DOID:171,5.57e-09,10;DOID:299,3.94e-07,25;DOID:4430,4.58e-07,1;DOID:0050619,8.49e-07,1;DOID:1357,8.49e-07,1|ontology_enrichment_uberon=UBERON:0002323!7.10e-09!46;UBERON:0004458!5.18e-08!49;UBERON:0001264!2.30e-07!10;UBERON:0003922!2.30e-07!10;UBERON:0003923!2.30e-07!10;UBERON:0003924!2.30e-07!10;UBERON:0003921!2.30e-07!10;UBERON:0000415!4.98e-07!4;UBERON:0007240!4.98e-07!4;UBERON:0005742!4.98e-07!4;UBERON:0005734!4.98e-07!4;UBERON:0004664!4.98e-07!4;UBERON:0004663!4.98e-07!4|ontology_enrichment_uberon_v019=UBERON:0004909;3.22e-11;2!UBERON:0000013;1.90e-10;5!UBERON:0002410;1.90e-10;5!UBERON:0001764;9.47e-07;1!UBERON:0001825;9.47e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004909,1.71e-11,2;UBERON:0000013,2.31e-10,5;UBERON:0002410,2.31e-10,5;UBERON:0001764,8.49e-07,1;UBERON:0001825,8.49e-07,1|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.529636723252875,1.14734648299525,0.709336764396714,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.896974044789907,0,0.64341568457443,1.48418066444991,0,0,0,0,0,0.483437798366489,0,1.19705285616665,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15832468261467,0,0,0.165018999841176,0,0,1.6068392984416,0.290012154876366,0,0,0,0.107420244868274,0,0,0.712256285173899,0,0,0,0.4046311234222,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,3.75944466818779,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0.583209226766509,0.520874984799877,0,0,0,0,0,0,2.06983080686081,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,2.28525931422807,0,0.649165919226273,0,0,0,0.889563386041866,0.494255755786011,0.208843899010911,0,0,0,0,1.76098157038881,0.728341138602278,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,2.27687636823834,0.832048038078832,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.39961921916426,2.01726584015748,0.114536596165916,1.37275998289572,1.29649318189335,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.13480708770837,12.0081527447994,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,3.40645944732405,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,5.8169524880672,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,2.51286554000375,0,0,0,0,0,0,0.138348634936231,0,0.606596470166591,0.285465333544967,0,0,0,0,0.2337133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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:90117667..90117687,+ | |||
|id=chr4:90117667..90117687,+ | |||
|ontology_enrichment_celltype=CL:1000306!4.98e-07!4;CL:0002547!4.98e-07!4;CL:0000223!8.62e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.90e-10;5!CL:0002178;3.55e-08;3!CL:0000167;4.71e-07;1!CL:0000164;4.71e-07;1!CL:0000502;4.71e-07;1!CL:0000172;4.71e-07;1!CL:0000173;4.71e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,4.25e-08,3;CL:0000167,4.58e-07,1;CL:0000164,4.58e-07,1;CL:0000502,4.58e-07,1;CL:0000172,4.58e-07,1;CL:0000173,4.58e-07,1;CL:0002351,4.58e-07,1;CL:0000066,5.76e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002351;4.71e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!5.92e-16!143;DOID:162!3.52e-14!235;DOID:14566!1.67e-13!239;DOID:305!2.85e-10!106;DOID:3119!3.94e-08!14;DOID:0050686!9.91e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:169;5.41e-15;6!DOID:171;4.96e-09;10!DOID:299;4.18e-07;25!DOID:4430;4.71e-07;1!DOID:0050619;9.47e-07;1!DOID:1357;9.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.13e-18,143;DOID:162,1.53e-15,235;DOID:14566,4.37e-15,239;DOID:169,6.60e-15,6;DOID:305,6.82e-14,106;DOID:171,5.57e-09,10;DOID:299,3.94e-07,25;DOID:4430,4.58e-07,1;DOID:0050619,8.49e-07,1;DOID:1357,8.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002323!7.10e-09!46;UBERON:0004458!5.18e-08!49;UBERON:0001264!2.30e-07!10;UBERON:0003922!2.30e-07!10;UBERON:0003923!2.30e-07!10;UBERON:0003924!2.30e-07!10;UBERON:0003921!2.30e-07!10;UBERON:0000415!4.98e-07!4;UBERON:0007240!4.98e-07!4;UBERON:0005742!4.98e-07!4;UBERON:0005734!4.98e-07!4;UBERON:0004664!4.98e-07!4;UBERON:0004663!4.98e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;3.22e-11;2!UBERON:0000013;1.90e-10;5!UBERON:0002410;1.90e-10;5!UBERON:0001764;9.47e-07;1!UBERON:0001825;9.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,1.71e-11,2;UBERON:0000013,2.31e-10,5;UBERON:0002410,2.31e-10,5;UBERON:0001764,8.49e-07,1;UBERON:0001825,8.49e-07,1 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.529636723252875,1.14734648299525,0.709336764396714,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.896974044789907,0,0.64341568457443,1.48418066444991,0,0,0,0,0,0.483437798366489,0,1.19705285616665,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15832468261467,0,0,0.165018999841176,0,0,1.6068392984416,0.290012154876366,0,0,0,0.107420244868274,0,0,0.712256285173899,0,0,0,0.4046311234222,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,3.75944466818779,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0.583209226766509,0.520874984799877,0,0,0,0,0,0,2.06983080686081,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,2.28525931422807,0,0.649165919226273,0,0,0,0.889563386041866,0.494255755786011,0.208843899010911,0,0,0,0,1.76098157038881,0.728341138602278,0,0,0,0,0,0,0.664653872707185,0,0.313932918407225,0,2.27687636823834,0.832048038078832,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.39961921916426,2.01726584015748,0.114536596165916,1.37275998289572,1.29649318189335,0,0,0,0,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.13480708770837,12.0081527447994,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,3.40645944732405,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,5.8169524880672,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,2.51286554000375,0,0,0,0,0,0,0.138348634936231,0,0.606596470166591,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,2.24901556081802,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,3.13193150358254,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27609848846413,0,0,0,0,1.72214979660816,0,0,0.139879507719444,0,8.56892287734466,0,3.30258477897382,0,0,0,0.619678821295011,1.11728983594649,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,1.07962490351128,0.11796972334774,0,0,0,0,0.397832444232549,0,0.20170506870352,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47716544605159,0,0,0,0,0,0,0,0,0,0,0,1.78968690876468,2.25745537315059,0,0,0,0,0,0,0,0,0.33883824611688,0,0.603851374266694,0,0,0.940634592723046,0,7.54164950725203,0,0,0,0,0,0,0,0,2.82315897372553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,1.06886962106224,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,2.66818364694289,0,1.3473780315988,0,0,0,0,0,0 | |||
|short_description=p@chr4:90117667..90117687,+ | |||
}} |
Revision as of 12:18, 13 September 2013
Short description: | p@chr4:90117667..90117687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:90117667..90117687, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 4.25e-08 | 3 |
peptide hormone secreting cell | 4.58e-07 | 1 |
enteroendocrine cell | 4.58e-07 | 1 |
type D enteroendocrine cell | 4.58e-07 | 1 |
somatostatin secreting cell | 4.58e-07 | 1 |
pancreatic D cell | 4.58e-07 | 1 |
progenitor cell of endocrine pancreas | 4.58e-07 | 1 |
epithelial cell | 5.76e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 1.71e-11 | 2 |
sympathetic nervous system | 2.31e-10 | 5 |
autonomic nervous system | 2.31e-10 | 5 |
maxillary sinus | 8.49e-07 | 1 |
paranasal sinus | 8.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.13e-18 | 143 |
cancer | 1.53e-15 | 235 |
disease of cellular proliferation | 4.37e-15 | 239 |
neuroendocrine tumor | 6.60e-15 | 6 |
carcinoma | 6.82e-14 | 106 |
neuroectodermal tumor | 5.57e-09 | 10 |
adenocarcinoma | 3.94e-07 | 25 |
somatostatinoma | 4.58e-07 | 1 |
paranasal sinus cancer | 8.49e-07 | 1 |
maxillary sinus cancer | 8.49e-07 | 1 |
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