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FFCP PHASE1:Mm9::chr16:4886302..4886320,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17237|HGNC=|MCL_coexpression_id=405|UniProt=Q9D074|association_with_transcript=21bp_to_ENSMUST00000023159,ENSMUST00000090460_5end|description=CAGE_peak_3_at_Mgrn1_5end|id=chr16:4886302..4886320,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!8.02e-16!122;UBERON:0000025!1.65e-15!114;UBERON:0001049!3.98e-09!52;UBERON:0005068!3.98e-09!52;UBERON:0006241!3.98e-09!52;UBERON:0007135!3.98e-09!52;UBERON:0001017!2.42e-08!73;UBERON:0005743!2.42e-08!73;UBERON:0002616!4.43e-08!49;UBERON:0000073!4.88e-08!75;UBERON:0001016!4.88e-08!75;UBERON:0000955!1.03e-07!50;UBERON:0006238!1.03e-07!50;UBERON:0002021!2.46e-07!10;UBERON:0000411!2.46e-07!10;UBERON:0001950!2.46e-07!10;UBERON:0007100!3.66e-07!18;UBERON:0000948!3.66e-07!18;UBERON:0005498!3.66e-07!18;UBERON:0004140!3.66e-07!18;UBERON:0009881!3.66e-07!18;UBERON:0004141!3.66e-07!18;UBERON:0003084!3.66e-07!18;UBERON:0007005!3.66e-07!18;UBERON:0004139!3.66e-07!18;UBERON:0004291!3.66e-07!18;UBERON:0003103!5.82e-07!43;UBERON:0000477!5.89e-07!154;UBERON:0004535!7.52e-07!23;UBERON:0001009!7.52e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.12e-15,114;UBERON:0004111,1.25e-15,122;UBERON:0010314,4.73e-11,92;UBERON:0000073,1.01e-10,54;UBERON:0001049,5.22e-10,52;UBERON:0005068,5.22e-10,52;UBERON:0006241,5.22e-10,52;UBERON:0007135,5.22e-10,52;UBERON:0001017,1.12e-09,73;UBERON:0001016,3.15e-09,75;UBERON:0002021,6.53e-08,10;UBERON:0000411,6.53e-08,10;UBERON:0001950,6.53e-08,10;UBERON:0007100,7.73e-08,18;UBERON:0000948,7.73e-08,18;UBERON:0005498,7.73e-08,18;UBERON:0004140,7.73e-08,18;UBERON:0009881,7.73e-08,18;UBERON:0004141,7.73e-08,18;UBERON:0003084,7.73e-08,18;UBERON:0007005,7.73e-08,18;UBERON:0004139,7.73e-08,18;UBERON:0004291,7.73e-08,18;UBERON:0002616,8.24e-08,46;UBERON:0003103,1.04e-07,43;UBERON:0004535,2.21e-07,23;UBERON:0001009,2.21e-07,23;UBERON:0000955,2.43e-07,47;UBERON:0006238,2.43e-07,47;UBERON:0002346,3.72e-07,64;UBERON:0003075,3.72e-07,64;UBERON:0007284,3.72e-07,64|phase1_expression=1.92178616525753,2.79180326111489,5.91499011206397,3.32710632437513,5.00895729946347,0.503637815735669,0.233612640595526,0.129123323441576,2.53419699873,1.40438715793196,0,0.398860794976682,0.684802919724823,0.34968160967599,0.666219523631325,1.01237633694913,0,2.99689057090326,4.79900517620086,1.27316895539409,1.02051948181284,0.496454756004426,0.522399578277871,0.319984845586813,1.37645568640302,1.72269589234506,0.86152399231815,1.939241094173,0.380046838912748,0.504060259519861,0.443461021310609,0,1.23012957516914,0,1.1554064790051,0.332469290716985,0.612508068787107,1.25559489221072,0.7813353445238,0.523523743973798,0,0,0,0.629484089877886,1.01376931219515,1.83546752161682,1.56478268869608,1.30815093828268,2.19686182734472,1.55543919259427,0.55994568650145,0,4.02678254538567,2.17608642603403,3.36093799142464,0.771778308107841,1.14613375975503,0,1.01158230429799,1.5869729378161,0,1.0165335962074,0,0,2.96659908770092,1.4209602298922,1.49800055259202,2.30530983192933,0.622137673850866,0.540023753326763,0.630974884054146,4.57041575046086,3.3130281142742,0,0.191690942036473,0,2.20231761998777,3.95830748064082,2.15049146558741,1.18697658957174,1.09785172322892,1.56274011167028,2.51264699101243,2.25105044012672,3.36156145108982,2.35702868378934,2.70506193518296,1.67759501242771,1.13589289999776,0.68014404096107,2.02905142091174,0.860423876981386,2.719885334831,2.15881276655127,0,2.68816132258401,1.40444420131752,2.04516387093669,1.29893002301434,1.06001872353102,1.40843419776681,0,0,0,0.432982082022428,0,0,1.1418387971906,1.8125651855302,0.445326417194474,1.21439728736295,1.21786191324856,0.461230994512117,0.60289056221049,0.23517741427141,0.376999773989026,2.71914464507811,1.73519228303894,0,1.29413479957927,1.32504911076236,0.969750506270444,0,3.51336956413857,3.56059401582874,1.02182822083437,0.479260498023681,0.599902730993408,0.762421362438388,2.84602214869163,2.74500361691176,0.753926112677186,5.21472960576829,3.3243009452943,3.32460871295296,4.05603157669394,1.32391173005411,1.24406970610093,1.51633655060205,0.210441855886474,1.30120442962704,0.459804208866946,1.0803727788321,0.60281927134286,1.15662048557257,0.896796041993948,0.937017245597288,0.776110112217047,1.29340795759705,1.13463648100692,2.63926686245923,1.53437012699302,1.39023624612799,2.43776516565517,1.23469281844766,0.995171334092466,0.702213187313235,0,0.284163499395593,3.10688658803253,3.04883877975425,2.52086886045421,2.13070262026689,2.36117078096885,4.01094493507183,4.18561100550734,7.51165523918934,10.8591768401468,9.2153515951549,10.9992200932994,12.0792526223325,12.1345989563026,5.26920276698522,9.93127498826751,2.10289948564127,0.514523061896422,1.32167513193519,0.528901133327089,0.639864751605702,0.928946687441754,1.03093969057675,1.00841762311671,0.444756087689741,0.760902504450237,1.42358718463353,0.494096864172033,0.502670417600539,0.596869416123452,1.5597126969529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|EntrezGene=17237
|HGNC=
|MCL_coexpression_id=405
|UniProt=Q9D074
|association_with_transcript=21bp_to_ENSMUST00000023159,ENSMUST00000090460_5end
|description=CAGE_peak_3_at_Mgrn1_5end
|id=chr16:4886302..4886320,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!8.02e-16!122;UBERON:0000025!1.65e-15!114;UBERON:0001049!3.98e-09!52;UBERON:0005068!3.98e-09!52;UBERON:0006241!3.98e-09!52;UBERON:0007135!3.98e-09!52;UBERON:0001017!2.42e-08!73;UBERON:0005743!2.42e-08!73;UBERON:0002616!4.43e-08!49;UBERON:0000073!4.88e-08!75;UBERON:0001016!4.88e-08!75;UBERON:0000955!1.03e-07!50;UBERON:0006238!1.03e-07!50;UBERON:0002021!2.46e-07!10;UBERON:0000411!2.46e-07!10;UBERON:0001950!2.46e-07!10;UBERON:0007100!3.66e-07!18;UBERON:0000948!3.66e-07!18;UBERON:0005498!3.66e-07!18;UBERON:0004140!3.66e-07!18;UBERON:0009881!3.66e-07!18;UBERON:0004141!3.66e-07!18;UBERON:0003084!3.66e-07!18;UBERON:0007005!3.66e-07!18;UBERON:0004139!3.66e-07!18;UBERON:0004291!3.66e-07!18;UBERON:0003103!5.82e-07!43;UBERON:0000477!5.89e-07!154;UBERON:0004535!7.52e-07!23;UBERON:0001009!7.52e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.12e-15,114;UBERON:0004111,1.25e-15,122;UBERON:0010314,4.73e-11,92;UBERON:0000073,1.01e-10,54;UBERON:0001049,5.22e-10,52;UBERON:0005068,5.22e-10,52;UBERON:0006241,5.22e-10,52;UBERON:0007135,5.22e-10,52;UBERON:0001017,1.12e-09,73;UBERON:0001016,3.15e-09,75;UBERON:0002021,6.53e-08,10;UBERON:0000411,6.53e-08,10;UBERON:0001950,6.53e-08,10;UBERON:0007100,7.73e-08,18;UBERON:0000948,7.73e-08,18;UBERON:0005498,7.73e-08,18;UBERON:0004140,7.73e-08,18;UBERON:0009881,7.73e-08,18;UBERON:0004141,7.73e-08,18;UBERON:0003084,7.73e-08,18;UBERON:0007005,7.73e-08,18;UBERON:0004139,7.73e-08,18;UBERON:0004291,7.73e-08,18;UBERON:0002616,8.24e-08,46;UBERON:0003103,1.04e-07,43;UBERON:0004535,2.21e-07,23;UBERON:0001009,2.21e-07,23;UBERON:0000955,2.43e-07,47;UBERON:0006238,2.43e-07,47;UBERON:0002346,3.72e-07,64;UBERON:0003075,3.72e-07,64;UBERON:0007284,3.72e-07,64
|phase1_expression=1.92178616525753,2.79180326111489,5.91499011206397,3.32710632437513,5.00895729946347,0.503637815735669,0.233612640595526,0.129123323441576,2.53419699873,1.40438715793196,0,0.398860794976682,0.684802919724823,0.34968160967599,0.666219523631325,1.01237633694913,0,2.99689057090326,4.79900517620086,1.27316895539409,1.02051948181284,0.496454756004426,0.522399578277871,0.319984845586813,1.37645568640302,1.72269589234506,0.86152399231815,1.939241094173,0.380046838912748,0.504060259519861,0.443461021310609,0,1.23012957516914,0,1.1554064790051,0.332469290716985,0.612508068787107,1.25559489221072,0.7813353445238,0.523523743973798,0,0,0,0.629484089877886,1.01376931219515,1.83546752161682,1.56478268869608,1.30815093828268,2.19686182734472,1.55543919259427,0.55994568650145,0,4.02678254538567,2.17608642603403,3.36093799142464,0.771778308107841,1.14613375975503,0,1.01158230429799,1.5869729378161,0,1.0165335962074,0,0,2.96659908770092,1.4209602298922,1.49800055259202,2.30530983192933,0.622137673850866,0.540023753326763,0.630974884054146,4.57041575046086,3.3130281142742,0,0.191690942036473,0,2.20231761998777,3.95830748064082,2.15049146558741,1.18697658957174,1.09785172322892,1.56274011167028,2.51264699101243,2.25105044012672,3.36156145108982,2.35702868378934,2.70506193518296,1.67759501242771,1.13589289999776,0.68014404096107,2.02905142091174,0.860423876981386,2.719885334831,2.15881276655127,0,2.68816132258401,1.40444420131752,2.04516387093669,1.29893002301434,1.06001872353102,1.40843419776681,0,0,0,0.432982082022428,0,0,1.1418387971906,1.8125651855302,0.445326417194474,1.21439728736295,1.21786191324856,0.461230994512117,0.60289056221049,0.23517741427141,0.376999773989026,2.71914464507811,1.73519228303894,0,1.29413479957927,1.32504911076236,0.969750506270444,0,3.51336956413857,3.56059401582874,1.02182822083437,0.479260498023681,0.599902730993408,0.762421362438388,2.84602214869163,2.74500361691176,0.753926112677186,5.21472960576829,3.3243009452943,3.32460871295296,4.05603157669394,1.32391173005411,1.24406970610093,1.51633655060205,0.210441855886474,1.30120442962704,0.459804208866946,1.0803727788321,0.60281927134286,1.15662048557257,0.896796041993948,0.937017245597288,0.776110112217047,1.29340795759705,1.13463648100692,2.63926686245923,1.53437012699302,1.39023624612799,2.43776516565517,1.23469281844766,0.995171334092466,0.702213187313235,0,0.284163499395593,3.10688658803253,3.04883877975425,2.52086886045421,2.13070262026689,2.36117078096885,4.01094493507183,4.18561100550734,7.51165523918934,10.8591768401468,9.2153515951549,10.9992200932994,12.0792526223325,12.1345989563026,5.26920276698522,9.93127498826751,2.10289948564127,0.514523061896422,1.32167513193519,0.528901133327089,0.639864751605702,0.928946687441754,1.03093969057675,1.00841762311671,0.444756087689741,0.760902504450237,1.42358718463353,0.494096864172033,0.502670417600539,0.596869416123452,1.55971269695296,0,1.08069024937347,0.995706366271836,0.569003702859245,1.25673363870702,3.38123207019241,1.22190796707189,1.16371492300575,1.05203729835478,1.70738650235495,3.09981310757165,2.19798218977925,2.96153193412321,0.592905254174298,0.83422552858047,0.982794975566015,0.224862112384854,0.202860121388503,0.482354319504834,1.2731292589071,0,3.24270453550071,3.29473695825698,4.31304619582064,2.60498663367952,0.936113019343682,1.01031551178845,0.896987067609561,0.964887042726734,0.739012760666419,0.947457058852424,0.488894929326078,2.37643120085263,0.938760993154008,3.01511263395268,2.38043640886014,3.70753930929818,3.78324345854858,2.43611158613652,2.39182152986231,1.47476983244164,1.38147985492716,1.44649058581512,0,1.63171705145613,0.491764273019036,0.827810238914197,3.69266356971921,3.98519734413491,0.983609672260053,0.504941854408746,1.26203287766503,1.95219372148319,0.430846795465598,1.91175038362042,0.222798674082394,1.13230612315533,1.21443210502468,1.46127928955656,1.18586333383957,0.642642632843614,0.567760340833074,1.6025904330053,0.977321756121456,1.15479086080775,1.32745138339963,1.21390318077491,1.209294227859,0,0.295301892880773,0.307435147943927,0,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,1.02131881726136,1.8006109403131,1.03486947026204,1.07168517515796,1.95074257006501,0.891844088010353,1.15184314421485,2.43571959291679,0.704015124191131,0.42366414172764,1.32317038832977,1.31909002353184,0.645857706783622,0.965006798850494,0.954978752025092,1.14898629821543,1.1659233465194,2.78137953015765,0.683483523191411,1.03193433981611,0.740778109478847,0,0.956859594047176,0.686334519619568,1.18984900995699,1.6794174278839,0.967399816630967,1.90934123603023,0.316335993581135,0.813277868507395,0.324016022465404,1.04544148007234,0.655087691238533,1.75323650300267,0.826534557253359,1.04702376793612,0.129614973291793,2.4853572523477,0,0.299033092087958,1.32366792365678,0.388902376688095,1.16243841129958,0.506868376472335,1.05621514781179,0.781226309063701,0.524296722128554,0,0.864090018773596,0.316011120628178,1.01362607645082,0.821687657318618,0.389762468933385,0,0.198681354781265,0.240390899039938,0.147689527174577,0.605798699688886,0.228620419965,0.302478555410522,0.487289403698762,0.481059208201647,0.584384510907845,0.680191150845634,0.221985953374065,0.807424709485281,0.503653849092235,0.965947970160952,0.93841237725591,1.09890974560359,1.07184189539533,1.00314420807073,6.21227026878773,3.68260189205742,4.58316410751517,6.18671456437275,4.7955776383945,6.0431511791176,4.72515750162264,4.05289082901798,4.98456649882625,3.62432218226274,0.93408612825759,0.399024873401031,0.682934423016537,0.729320151204882,1.88651846365184,0.919217542250071,1.33348036680969,1.03017528619447,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,1.49826411951812,1.21647789569252,0.746661096422973,1.42888107384922,1.15884325944855,1.35036454324594,1.23625770240992,1.17759136107518,0.342869252385415,1.24233064311536,1.1921809497366,1.74415699958794,1.03520318456864,1.4384483341585,0.914639864363863,0.526139422875686,0.679020569229309,1.12228454331548,0.949080144993393,1.57607171800902,2.86461730218783,1.39443157067369,0.771626443924566,1.49886346762768,0.935726433781634,1.07435527024149,1.72159498861959,0.441182838239031,1.39120701372253
|short_description=p3@Mgrn1
}}

Revision as of 12:50, 13 September 2013

Short description:p3@Mgrn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Mgrn1_5end
Coexpression cluster:MCL_coexpression_mm9:405
Association with transcript: 21bp_to_ENSMUST00000023159, ENSMUST00000090460_5end
EntrezGene:Mgrn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Mgrn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I29.22
heart, neonate N10.CNhs11118.749-24G111.00
heart, neonate N16.CNhs11209.782-15G112.08
heart, neonate N20.CNhs11127.821-26I612.13
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D29.93
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube1.12e-15114
anatomical conduit1.25e-15122
structure with developmental contribution from neural crest4.73e-1192
regional part of nervous system1.01e-1054
neural tube5.22e-1052
neural rod5.22e-1052
future spinal cord5.22e-1052
neural keel5.22e-1052
central nervous system1.12e-0973
nervous system3.15e-0975
occipital lobe6.53e-0810
visual cortex6.53e-0810
neocortex6.53e-0810
primary circulatory organ7.73e-0818
heart7.73e-0818
primitive heart tube7.73e-0818
primary heart field7.73e-0818
anterior lateral plate mesoderm7.73e-0818
heart tube7.73e-0818
heart primordium7.73e-0818
cardiac mesoderm7.73e-0818
cardiogenic plate7.73e-0818
heart rudiment7.73e-0818
regional part of brain8.24e-0846
compound organ1.04e-0743
cardiovascular system2.21e-0723
circulatory system2.21e-0723
brain2.43e-0747
future brain2.43e-0747
neurectoderm3.72e-0764
neural plate3.72e-0764
presumptive neural plate3.72e-0764







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