FFCP PHASE1:Mm9::chr16:84835900..84835914,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11957|HGNC=|UniProt=P97450|association_with_transcript=-30bp_to_ENSMUST00000023608_5end|description=CAGE_peak_6_at_Atp5j_5end|id=chr16:84835900..84835914,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,1.39e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.92e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.27e-08,15;UBERON:0001242,6.57e-07,13;UBERON:0001262,6.57e-07,13;UBERON:0004786,6.57e-07,13|phase1_expression=2.24208385946712,5.93258192986914,6.82498859084304,10.5862473957391,6.01074875935617,2.01455126294268,2.80335168714631,0.903863264091034,0,0.70219357896598,0.513653904676515,0.239316476986009,0.342401459862411,0.611942816932982,0,1.01237633694913,0,0,0.274228867211478,0,0.850432901510698,0.992909512008853,1.56719873483361,3.83981814704176,4.35877634027623,6.89078356938024,5.1691439539089,5.17130958446134,3.42042155021473,4.53654233567875,5.76499327703792,2.54012269383853,1.23012957516914,0,2.02196133825892,0.498703936075477,1.22501613757421,1.67412652294763,2.3440060335714,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,0.881277725829041,1.11514624341466,0.917733760808408,0.782391344348039,2.39827672018491,2.41654801007919,1.74986909166855,0.699932108126813,1.43752564364972,0.671130424230945,0,0.336093799142464,2.31533492432352,2.0057340795713,1.54701627683233,1.21389876515759,1.05798195854407,1.90149421051854,5.42151251310611,3.55717918444456,4.04954872776629,2.96659908770092,1.4209602298922,2.39680088414724,2.68952813725088,1.34796496001021,0.810035629990144,1.05162480675691,0.285650984403804,1.32521124570968,0.489963196859816,2.20444583341944,1.83843757322004,1.10115880999389,0.255374676170375,0.614426133024974,0.659431438650969,1.09785172322892,0.52091337055676,1.11673199600552,1.68828783009504,0.61119299110724,1.47314292736834,0.854230084794618,2.23679334990361,1.59025005999687,1.058001841495,1.44932244350839,2.58127163094416,4.0798280022465,4.85732872474035,1.29955283489534,3.58421509677868,1.54488862144927,1.02258193546835,1.03914401841148,1.7666978725517,1.40843419776681,0,0,0,1.73192832808971,2.02687892380079,2.52762222507392,2.2836775943812,0,0.593768556259299,2.08182392119363,1.52232739156071,0.922461989024234,1.95939432718409,0.940709657085638,2.13633205260448,1.23597483867187,2.74738778147832,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,2.55457055208591,1.1981512450592,1.79970819298022,1.90605340609597,0.149790639404823,0,1.38219787324151,1.21677024134594,0.511430914660661,0.62336413367868,1.1356888414743,1.32391173005411,0.248813941220186,0.252722758433675,0.631325567659422,0.520481771850815,1.37941262660084,0.360124259610698,0.753524089178575,0.748401490664606,0.640568601424249,0.749613796477831,0.776110112217047,1.5089759505299,0.945530400839096,0.703804496655795,0.219195732427575,0,0,0,1.79130840136644,0,1.54408744268829,1.98914449576915,0.828503090142008,1.17263029990548,0.900310307305074,0.710234206755631,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,1.98501082024188,1.31647879930784,1.80584210487005,2.1888578577381,1.60819986167866,1.53685080703735,1.61047702512446,0.841159794256509,0.617427674275707,2.31293148088659,1.58670339998127,1.06644125267617,0.232236671860439,0.38660238396628,1.00841762311671,0,1.52180500890047,1.42358718463353,1.97638745668813,2.5133520880027,0.397912944082302,1.75467678407208,3.59527763461689,1.94524244887225,2.58883655230677,1.51734320762465,0.913988100877831,1.1270773567308,1.4255592949172,1.35766741017338,2.31448205638051,0.758838445491087,1.18088118383682,0,0.740382983530803,5.92905254174298,0.333690211432188,0.982794975566015,0.674586337154561,1.01430060694251,0.241177159752417,1.01850340712568,2.01387296215567,2.43202840162553,1.09824565275233,4.31304619582064,1.86070473834252,0.936113019343682,2.52578877947112,3.04975602987251,5.78932225636041,0.923765950833023,0.757965647081939,0.488894929326078,0.678980343100753,0.234690248288502,0.670025029767263,0.476087281772027,0.780534591431195,0.157635144106191,0.664394068946325,0.637819074629948,0.491589944147214,0.863424909329478,0.723245292907558,3.01582567878545,3.26343410291226,1.96705709207614,1.37968373152366,0.160550589987792,0.35163505977661,1.63934945376675,0,0.94652465824877,1.17131623288992,1.93881057959519,0.955875191810208,1.78238939265915,0.283076530788832,2.83367491172426,2.04579100537918,2.76701444562566,0.321321316421807,0.567760340833074,1.6025904330053,1.14020871547503,0.329940245945071,1.32745138339963,1.21390318077491,2.11626489875326,1.13163047853539,1.47650946440386,1.84461088766356,1.80899805217755,1.81766864738753,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,1.29358683782755,0.857348140126369,0.886701168211368,0.713475270408282,0.164549020602121,1.2178597964584,1.17335854031855,1.69465656691056,1.323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| ||
|EntrezGene=11957 | |||
|HGNC= | |||
|UniProt=P97450 | |||
|association_with_transcript=-30bp_to_ENSMUST00000023608_5end | |||
|description=CAGE_peak_6_at_Atp5j_5end | |||
|id=chr16:84835900..84835914,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.39e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.92e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.27e-08,15;UBERON:0001242,6.57e-07,13;UBERON:0001262,6.57e-07,13;UBERON:0004786,6.57e-07,13 | |||
|phase1_expression=2.24208385946712,5.93258192986914,6.82498859084304,10.5862473957391,6.01074875935617,2.01455126294268,2.80335168714631,0.903863264091034,0,0.70219357896598,0.513653904676515,0.239316476986009,0.342401459862411,0.611942816932982,0,1.01237633694913,0,0,0.274228867211478,0,0.850432901510698,0.992909512008853,1.56719873483361,3.83981814704176,4.35877634027623,6.89078356938024,5.1691439539089,5.17130958446134,3.42042155021473,4.53654233567875,5.76499327703792,2.54012269383853,1.23012957516914,0,2.02196133825892,0.498703936075477,1.22501613757421,1.67412652294763,2.3440060335714,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,0.881277725829041,1.11514624341466,0.917733760808408,0.782391344348039,2.39827672018491,2.41654801007919,1.74986909166855,0.699932108126813,1.43752564364972,0.671130424230945,0,0.336093799142464,2.31533492432352,2.0057340795713,1.54701627683233,1.21389876515759,1.05798195854407,1.90149421051854,5.42151251310611,3.55717918444456,4.04954872776629,2.96659908770092,1.4209602298922,2.39680088414724,2.68952813725088,1.34796496001021,0.810035629990144,1.05162480675691,0.285650984403804,1.32521124570968,0.489963196859816,2.20444583341944,1.83843757322004,1.10115880999389,0.255374676170375,0.614426133024974,0.659431438650969,1.09785172322892,0.52091337055676,1.11673199600552,1.68828783009504,0.61119299110724,1.47314292736834,0.854230084794618,2.23679334990361,1.59025005999687,1.058001841495,1.44932244350839,2.58127163094416,4.0798280022465,4.85732872474035,1.29955283489534,3.58421509677868,1.54488862144927,1.02258193546835,1.03914401841148,1.7666978725517,1.40843419776681,0,0,0,1.73192832808971,2.02687892380079,2.52762222507392,2.2836775943812,0,0.593768556259299,2.08182392119363,1.52232739156071,0.922461989024234,1.95939432718409,0.940709657085638,2.13633205260448,1.23597483867187,2.74738778147832,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,0.209446706813455,2.55457055208591,1.1981512450592,1.79970819298022,1.90605340609597,0.149790639404823,0,1.38219787324151,1.21677024134594,0.511430914660661,0.62336413367868,1.1356888414743,1.32391173005411,0.248813941220186,0.252722758433675,0.631325567659422,0.520481771850815,1.37941262660084,0.360124259610698,0.753524089178575,0.748401490664606,0.640568601424249,0.749613796477831,0.776110112217047,1.5089759505299,0.945530400839096,0.703804496655795,0.219195732427575,0,0,0,1.79130840136644,0,1.54408744268829,1.98914449576915,0.828503090142008,1.17263029990548,0.900310307305074,0.710234206755631,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,1.98501082024188,1.31647879930784,1.80584210487005,2.1888578577381,1.60819986167866,1.53685080703735,1.61047702512446,0.841159794256509,0.617427674275707,2.31293148088659,1.58670339998127,1.06644125267617,0.232236671860439,0.38660238396628,1.00841762311671,0,1.52180500890047,1.42358718463353,1.97638745668813,2.5133520880027,0.397912944082302,1.75467678407208,3.59527763461689,1.94524244887225,2.58883655230677,1.51734320762465,0.913988100877831,1.1270773567308,1.4255592949172,1.35766741017338,2.31448205638051,0.758838445491087,1.18088118383682,0,0.740382983530803,5.92905254174298,0.333690211432188,0.982794975566015,0.674586337154561,1.01430060694251,0.241177159752417,1.01850340712568,2.01387296215567,2.43202840162553,1.09824565275233,4.31304619582064,1.86070473834252,0.936113019343682,2.52578877947112,3.04975602987251,5.78932225636041,0.923765950833023,0.757965647081939,0.488894929326078,0.678980343100753,0.234690248288502,0.670025029767263,0.476087281772027,0.780534591431195,0.157635144106191,0.664394068946325,0.637819074629948,0.491589944147214,0.863424909329478,0.723245292907558,3.01582567878545,3.26343410291226,1.96705709207614,1.37968373152366,0.160550589987792,0.35163505977661,1.63934945376675,0,0.94652465824877,1.17131623288992,1.93881057959519,0.955875191810208,1.78238939265915,0.283076530788832,2.83367491172426,2.04579100537918,2.76701444562566,0.321321316421807,0.567760340833074,1.6025904330053,1.14020871547503,0.329940245945071,1.32745138339963,1.21390318077491,2.11626489875326,1.13163047853539,1.47650946440386,1.84461088766356,1.80899805217755,1.81766864738753,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,0.720244376125241,1.29358683782755,0.857348140126369,0.886701168211368,0.713475270408282,0.164549020602121,1.2178597964584,1.17335854031855,1.69465656691056,1.32317038832977,0.16488625294148,0.322928853391811,0.72375509913787,0.238744688006273,0.492422699235184,0.582961673259701,0.556275906031529,0.341741761595705,1.44470807574256,0.555583582109135,0.565105371014073,0,0.686334519619568,1.5298058699447,0.979660166265606,0.967399816630967,0.954670618015114,1.10717597753397,0.406638934253697,0.756037385752609,0,0.436725127492355,0.404593039154462,0.743881101528023,1.04702376793612,0.388844919875379,1.24267862617385,0.56369293868419,1.94371509857172,1.65458490457098,1.361158318408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| |||
|short_description=p6@Atp5j | |||
}} | |||
Revision as of 13:10, 13 September 2013
| Short description: | p6@Atp5j |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Atp5j_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -30bp_to_ENSMUST00000023608_5end |
| EntrezGene: | Atp5j |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.39e-07 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 3.27e-08 | 15 |
| intestinal mucosa | 6.57e-07 | 13 |
| wall of intestine | 6.57e-07 | 13 |
| gastrointestinal system mucosa | 6.57e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
