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FFCP PHASE1:Mm9::chr16:90284545..90284593,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=224432|HGNC=|MCL_coexpression_id=797|UniProt=Q7TSH6|association_with_transcript=0bp_to_ENSMUST00000163419_5end|description=CAGE_peak_2_at_Scaf4_5end|id=chr16:90284545..90284593,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.23e-15!73;UBERON:0005743!1.23e-15!73;UBERON:0004121!7.20e-15!102;UBERON:0000924!7.20e-15!102;UBERON:0006601!7.20e-15!102;UBERON:0000073!1.77e-14!75;UBERON:0001016!1.77e-14!75;UBERON:0000033!4.87e-13!63;UBERON:0002346!3.62e-11!71;UBERON:0003075!3.62e-11!71;UBERON:0007284!3.62e-11!71;UBERON:0000955!1.89e-10!50;UBERON:0006238!1.89e-10!50;UBERON:0001049!5.71e-10!52;UBERON:0005068!5.71e-10!52;UBERON:0006241!5.71e-10!52;UBERON:0007135!5.71e-10!52;UBERON:0002616!6.45e-10!49;UBERON:0004111!2.89e-09!122;UBERON:0000468!2.01e-08!333;UBERON:0003056!5.55e-08!49;UBERON:0000025!1.44e-07!114;UBERON:0000479!5.99e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.47e-16,95;UBERON:0000924,2.47e-16,95;UBERON:0006601,2.47e-16,95;UBERON:0001017,1.23e-15,73;UBERON:0001016,1.77e-14,75;UBERON:0002346,8.12e-13,64;UBERON:0003075,8.12e-13,64;UBERON:0007284,8.12e-13,64;UBERON:0010371,9.68e-12,73;UBERON:0000073,4.25e-11,54;UBERON:0010314,7.22e-11,92;UBERON:0001049,5.71e-10,52;UBERON:0005068,5.71e-10,52;UBERON:0006241,5.71e-10,52;UBERON:0007135,5.71e-10,52;UBERON:0004111,2.89e-09,122;UBERON:0000955,5.86e-09,47;UBERON:0006238,5.86e-09,47;UBERON:0002616,1.88e-08,46;UBERON:0003056,5.55e-08,49;UBERON:0000025,1.44e-07,114;UBERON:0000479,5.73e-07,349|phase1_expression=9.44878197918284,1.04692622291808,0,2.72217790176147,2.00358291978539,5.03637815735669,5.13947809310157,0.903863264091034,4.22366166455,4.91535505276186,0.856089841127525,0.797721589953364,1.54080656938085,0.961624426608971,4.99664642723494,1.61980213911861,2.09868563438444,2.99689057090326,4.79900517620086,3.81950686618227,17.2637879006672,5.16312946244604,3.13439746966722,3.19984845586813,2.2940928106717,1.72269589234506,3.01533397311352,2.37018355954478,1.71021077510736,3.2763916868791,2.21730510655305,1.27006134691926,1.84519436275371,0,3.75507105676657,2.99222361645286,4.28755648150975,2.09265815368454,3.1253413780952,3.66466620781659,1.17646297606203,2.73218193983378,0.971020706062307,4.65818226509636,4.8660926985367,3.85448179539531,11.7358701652206,10.4652075062614,8.78744730937887,10.6936444490856,6.01941612989059,10.062679505548,6.37573903019398,3.62681071005672,4.36921938885203,2.82985379639542,8.02293631828519,7.21940929188419,16.3876333296274,8.46385566835253,13.3104594736298,6.43804610931351,5.33576877666684,3.1496490104849,4.94433181283487,4.2628806896766,5.39280198933128,12.6792040756113,6.0139975138917,5.26523159493594,4.83747411108179,8.85518051651791,8.39300455616131,6.00204916153275,3.83381884072945,7.35375029288017,19.82085857989,19.5361627270337,17.2039317246993,18.0684214190366,14.8209982635904,14.5855743755893,10.6089539620525,7.87867654044352,13.5990440521361,17.9723437138937,12.5287079103211,16.5895506784518,2.72614295999463,4.91215140694106,11.3047150593654,3.44169550792555,4.75979933595425,4.85732872474035,3.89865850468601,6.2723764193627,7.16266542671934,7.6693645160126,2.59786004602869,6.36011234118612,9.15482228548423,7.69958864485907,61.153257529595,35.5533351576666,2.59789249213457,3.54703811665138,3.0331466700887,7.76450382089608,16.0541487861246,14.1020032111584,5.03107447621794,4.26251669636998,4.15107895060905,4.6724018571313,9.28950786372068,6.03199638382442,9.88779870937496,29.6428681685819,8.84610551949874,10.8383789464764,8.17113618303456,8.24287930329878,3.72783522436244,28.6925181071316,21.3635640949724,5.36459815938042,4.55297473122497,1.79970819298022,2.41433431438823,21.8694333531041,17.3850229071078,4.77486538028885,13.5582969749976,9.46147192122223,16.8308316093244,15.5751612545047,6.11036183101898,8.8328949133166,17.4378703319236,15.3622554797126,7.67710613479952,7.81667155073808,12.2442248267637,8.59017461663576,13.1310443362063,12.5551445879153,12.9308379892426,26.3877438153796,11.4251036254406,10.9681526497335,15.3077478022636,6.79506770525482,7.50727572909114,6.268538997399,11.1122353660289,7.16523360546575,0.702213187313235,3.08817488537658,2.27330799516474,6.21377317606506,3.75241695969754,6.84235833551856,7.81257627431194,7.28027657465394,6.32495162838251,6.74348439776183,4.02410102099429,9.45799273174073,9.87359099480883,12.4767272700112,15.2409361946209,13.7427988179812,11.8557062257167,12.3469905259542,13.24826675954,8.74689205223918,2.64335026387038,4.7601101999438,7.03851226766272,8.36052018697579,7.7320476793256,7.46229041106367,4.22518283305254,4.56541502670142,3.32170343081158,4.6115707322723,4.27269854960458,4.37704238490532,6.82374304916921,4.49409704327111,4.32276099749388,3.98282546508734,6.63837653335786,8.45438993311993,16.9061603509621,7.33144780243131,8.33995694820791,6.73303870947058,11.8884689793604,11.8088118383682,5.33795674660674,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|EntrezGene=224432
|HGNC=
|MCL_coexpression_id=797
|UniProt=Q7TSH6
|association_with_transcript=0bp_to_ENSMUST00000163419_5end
|description=CAGE_peak_2_at_Scaf4_5end
|id=chr16:90284545..90284593,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.23e-15!73;UBERON:0005743!1.23e-15!73;UBERON:0004121!7.20e-15!102;UBERON:0000924!7.20e-15!102;UBERON:0006601!7.20e-15!102;UBERON:0000073!1.77e-14!75;UBERON:0001016!1.77e-14!75;UBERON:0000033!4.87e-13!63;UBERON:0002346!3.62e-11!71;UBERON:0003075!3.62e-11!71;UBERON:0007284!3.62e-11!71;UBERON:0000955!1.89e-10!50;UBERON:0006238!1.89e-10!50;UBERON:0001049!5.71e-10!52;UBERON:0005068!5.71e-10!52;UBERON:0006241!5.71e-10!52;UBERON:0007135!5.71e-10!52;UBERON:0002616!6.45e-10!49;UBERON:0004111!2.89e-09!122;UBERON:0000468!2.01e-08!333;UBERON:0003056!5.55e-08!49;UBERON:0000025!1.44e-07!114;UBERON:0000479!5.99e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.47e-16,95;UBERON:0000924,2.47e-16,95;UBERON:0006601,2.47e-16,95;UBERON:0001017,1.23e-15,73;UBERON:0001016,1.77e-14,75;UBERON:0002346,8.12e-13,64;UBERON:0003075,8.12e-13,64;UBERON:0007284,8.12e-13,64;UBERON:0010371,9.68e-12,73;UBERON:0000073,4.25e-11,54;UBERON:0010314,7.22e-11,92;UBERON:0001049,5.71e-10,52;UBERON:0005068,5.71e-10,52;UBERON:0006241,5.71e-10,52;UBERON:0007135,5.71e-10,52;UBERON:0004111,2.89e-09,122;UBERON:0000955,5.86e-09,47;UBERON:0006238,5.86e-09,47;UBERON:0002616,1.88e-08,46;UBERON:0003056,5.55e-08,49;UBERON:0000025,1.44e-07,114;UBERON:0000479,5.73e-07,349
|phase1_expression=9.44878197918284,1.04692622291808,0,2.72217790176147,2.00358291978539,5.03637815735669,5.13947809310157,0.903863264091034,4.22366166455,4.91535505276186,0.856089841127525,0.797721589953364,1.54080656938085,0.961624426608971,4.99664642723494,1.61980213911861,2.09868563438444,2.99689057090326,4.79900517620086,3.81950686618227,17.2637879006672,5.16312946244604,3.13439746966722,3.19984845586813,2.2940928106717,1.72269589234506,3.01533397311352,2.37018355954478,1.71021077510736,3.2763916868791,2.21730510655305,1.27006134691926,1.84519436275371,0,3.75507105676657,2.99222361645286,4.28755648150975,2.09265815368454,3.1253413780952,3.66466620781659,1.17646297606203,2.73218193983378,0.971020706062307,4.65818226509636,4.8660926985367,3.85448179539531,11.7358701652206,10.4652075062614,8.78744730937887,10.6936444490856,6.01941612989059,10.062679505548,6.37573903019398,3.62681071005672,4.36921938885203,2.82985379639542,8.02293631828519,7.21940929188419,16.3876333296274,8.46385566835253,13.3104594736298,6.43804610931351,5.33576877666684,3.1496490104849,4.94433181283487,4.2628806896766,5.39280198933128,12.6792040756113,6.0139975138917,5.26523159493594,4.83747411108179,8.85518051651791,8.39300455616131,6.00204916153275,3.83381884072945,7.35375029288017,19.82085857989,19.5361627270337,17.2039317246993,18.0684214190366,14.8209982635904,14.5855743755893,10.6089539620525,7.87867654044352,13.5990440521361,17.9723437138937,12.5287079103211,16.5895506784518,2.72614295999463,4.91215140694106,11.3047150593654,3.44169550792555,4.75979933595425,4.85732872474035,3.89865850468601,6.2723764193627,7.16266542671934,7.6693645160126,2.59786004602869,6.36011234118612,9.15482228548423,7.69958864485907,61.153257529595,35.5533351576666,2.59789249213457,3.54703811665138,3.0331466700887,7.76450382089608,16.0541487861246,14.1020032111584,5.03107447621794,4.26251669636998,4.15107895060905,4.6724018571313,9.28950786372068,6.03199638382442,9.88779870937496,29.6428681685819,8.84610551949874,10.8383789464764,8.17113618303456,8.24287930329878,3.72783522436244,28.6925181071316,21.3635640949724,5.36459815938042,4.55297473122497,1.79970819298022,2.41433431438823,21.8694333531041,17.3850229071078,4.77486538028885,13.5582969749976,9.46147192122223,16.8308316093244,15.5751612545047,6.11036183101898,8.8328949133166,17.4378703319236,15.3622554797126,7.67710613479952,7.81667155073808,12.2442248267637,8.59017461663576,13.1310443362063,12.5551445879153,12.9308379892426,26.3877438153796,11.4251036254406,10.9681526497335,15.3077478022636,6.79506770525482,7.50727572909114,6.268538997399,11.1122353660289,7.16523360546575,0.702213187313235,3.08817488537658,2.27330799516474,6.21377317606506,3.75241695969754,6.84235833551856,7.81257627431194,7.28027657465394,6.32495162838251,6.74348439776183,4.02410102099429,9.45799273174073,9.87359099480883,12.4767272700112,15.2409361946209,13.7427988179812,11.8557062257167,12.3469905259542,13.24826675954,8.74689205223918,2.64335026387038,4.7601101999438,7.03851226766272,8.36052018697579,7.7320476793256,7.46229041106367,4.22518283305254,4.56541502670142,3.32170343081158,4.6115707322723,4.27269854960458,4.37704238490532,6.82374304916921,4.49409704327111,4.32276099749388,3.98282546508734,6.63837653335786,8.45438993311993,16.9061603509621,7.33144780243131,8.33995694820791,6.73303870947058,11.8884689793604,11.8088118383682,5.33795674660674,7.52722699922983,5.33614728756868,5.33904338291501,6.4864468387357,3.59779379815766,3.85434230638156,3.37648023653384,3.56476192493988,5.4662266115654,5.0261920300261,2.74561413188081,20.1275489138296,6.32639611036456,7.80094182786401,5.30415643688935,3.40855085691633,1.92977408545347,16.0735275444946,8.90609635321278,11.2445833744998,11.0334305753872,11.9692026627136,12.730475565578,9.52174563544055,15.2204245329083,15.2906089783005,11.7376285513851,14.6698387164888,13.2729284919748,11.569893785015,14.3202567995696,7.53956419696361,3.80733978673097,4.91764273019036,8.00216564283724,17.1789131286937,18.1678114217915,4.75411341592359,10.6037789425837,9.14973836307144,15.2271110275689,15.7259080344943,10.5146271099123,12.2539270745317,22.9291989938954,12.1443210502468,14.6127928955656,12.2539211163422,20.5645642509957,14.9037089468682,6.58842733568844,7.00413925220377,16.8269525431986,7.96470830039777,7.52619972080442,3.93020624054176,5.65815239267694,5.61073596473468,5.84126781093462,7.75284879504663,11.2695456138027,9.62542921638748,10.1131762539461,8.4334886859999,9.28219889233682,18.0432991049508,7.74262704334634,11.1248468053169,9.21649250635847,9.57637261668277,6.77801506887868,9.3792941743209,6.08929898229199,7.74416636610244,10.1679394014634,14.9959310677374,15.8290802823821,8.23468576149118,6.81536051688161,5.252383136138,3.77524069413641,6.12109756922687,14.4631735568198,6.32222258952055,4.12773735926445,2.96311243791539,2.63715839806567,4.78429797023588,3.43167259809784,1.69978429993855,2.23922323717853,3.45499934511059,3.81868247206045,9.80641580101519,9.14937602070819,8.10040056163509,5.43629569637619,6.11415178489297,6.33862428008657,9.4224939526883,6.02038666563268,6.86959358446502,11.1841076355647,56.369293868419,7.32631075615496,3.97100377097034,7.77804753376191,5.8121920564979,6.42033276864957,6.21993364822496,10.2861464026721,12.687980675511,22.7089073576446,28.2269406132708,2.21207784439725,4.45995473638361,4.5192821152524,2.5984164595559,2.50637373934474,1.78813219303138,1.9231271923195,1.47689527174577,2.3222283488074,1.67654974641,1.91569751759997,2.24153125701431,1.25075394132428,1.05189211963412,13.1503622496823,4.43971906748129,3.05027112472217,2.3503846290971,19.8985281853156,9.75948872346146,8.42497471629419,7.5028932677673,17.5550236412377,18.0720589637461,14.2700823317225,12.6037012956667,12.3734291287455,13.0165678756422,17.3740596399631,10.1253375034771,13.9599572999508,19.4851235863208,13.9795284172991,10.1711600632493,13.9658705690361,8.53668028770671,8.99494853152688,9.4325923182592,7.35374033800057,10.2233494788743,9.88968274746692,10.2694147069381,8.08631077644152,11.660047794951,10.3744487762342,10.4878488366268,11.0123262136375,11.142480977389,13.8125170472091,10.6613579869267,8.29509647993932,11.9504911232959,10.009526569139,9.60033906679163,6.74408063405482,6.43777712857767,13.5172167468066,11.2931256498397,9.89990912332615,9.87811053512972,12.8904158604543,8.96307151382688,12.906272248128,9.25353141368558,9.94895271993191,9.41231399290286,6.66228417099654,9.25951732709479,9.99242311751784,8.18760629558929,11.1732948105115,12.0511649203371,9.70602244125868,8.81097775357602
|short_description=p2@Scaf4
}}

Revision as of 13:15, 13 September 2013

Short description:p2@Scaf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scaf4_5end
Coexpression cluster:MCL_coexpression_mm9:797
Association with transcript: 0bp_to_ENSMUST00000163419_5end
EntrezGene:Scaf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scaf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C316.39
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.59
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F94.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I861.15
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.76
accessory axillary lymph node, adult.CNhs10475.1063-29H916.05
adrenal gland, adult.CNhs10508.49-24D714.10
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C19.29
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H129.64
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F510.84
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I221.36
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A421.87
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B215.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B217.44
eyeball, adult.CNhs10484.31-12G415.36
eyeball, embryo E12.CNhs11016.345-16C67.68
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C912.24
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C613.13
eyeball, neonate N01.CNhs11140.1532-43E712.56
eyeball, neonate N02.CNhs11205.1551-44G812.93
eyeball, neonate N16.CNhs11188.777-19A226.39
forelimb, embryo E11.CNhs10596.335-25E211.43
forelimb, embryo E12.CNhs10600.359-14H210.97
forelimb, embryo E13.CNhs10589.384-1E215.31
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B511.11
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C66.32
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G112.48
heart, neonate N16.CNhs11209.782-15G115.24
heart, neonate N20.CNhs11127.821-26I613.74
heart, neonate N25.CNhs11196.1351-25D311.86
heart, neonate N30.CNhs11202.1390-42D212.35
hippocampus, adult.CNhs10478.13-16E813.25
hippocampus, neonate N00.CNhs11228.627-43G18.75
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G76.73
kidney, neonate N10.CNhs11206.758-6D511.89
kidney, neonate N20.CNhs11113.832-19I111.81
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B116.07
lung, embryo E12.CNhs10522.354-16G28.91
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C511.03
lung, embryo E16.CNhs10998.458-17B611.97
lung, embryo E17.CNhs10605.480-44A612.73
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C615.22
lung, neonate N06.CNhs11212.683-20E515.29
lung, neonate N07.CNhs11111.715-19A311.74
lung, neonate N10.CNhs11219.750-23E614.67
lung, neonate N20.CNhs11109.822-18A413.27
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H214.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H28.00
medulla oblongata, adult.CNhs10477.17-12C217.18
medulla oblongata, neonate N30.CNhs11200.1396-42A318.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.73
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I47.00
oviduct, adult pregnant day01.CNhs10500.988-6G616.83
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G818.04
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C711.12
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B99.58
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G310.17
prostate, adult.CNhs10470.859-1F815.00
skin, adult.CNhs10492.30-1C315.83
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H36.82
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G26.32
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D48.10
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B86.34
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I16.87
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G556.37
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I55.81
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I410.29
testis, neonate N10.CNhs11204.763-44D912.69
testis, neonate N20.CNhs11110.839-18H322.71
testis, neonate N30.CNhs11130.1391-42E228.23
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I810.17
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F27.35
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C612.05
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B48.81





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.47e-1695
ectoderm2.47e-1695
presumptive ectoderm2.47e-1695
central nervous system1.23e-1573
nervous system1.77e-1475
neurectoderm8.12e-1364
neural plate8.12e-1364
presumptive neural plate8.12e-1364
ecto-epithelium9.68e-1273
regional part of nervous system4.25e-1154
structure with developmental contribution from neural crest7.22e-1192
neural tube5.71e-1052
neural rod5.71e-1052
future spinal cord5.71e-1052
neural keel5.71e-1052
anatomical conduit2.89e-09122
brain5.86e-0947
future brain5.86e-0947
regional part of brain1.88e-0846
pre-chordal neural plate5.55e-0849
tube1.44e-07114
tissue5.73e-07349







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