FFCP PHASE1:Mm9::chr17:17963911..17963928,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=360|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:17963911..17963928,+|id=chr17:17963911..17963928,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.62e-12!63;UBERON:0000955!3.48e-10!50;UBERON:0006238!3.48e-10!50;UBERON:0003056!5.76e-10!49;UBERON:0002616!1.46e-09!49;UBERON:0002346!5.94e-09!71;UBERON:0003075!5.94e-09!71;UBERON:0007284!5.94e-09!71;UBERON:0004121!1.02e-08!102;UBERON:0000924!1.02e-08!102;UBERON:0006601!1.02e-08!102;UBERON:0001049!2.21e-08!52;UBERON:0005068!2.21e-08!52;UBERON:0006241!2.21e-08!52;UBERON:0007135!2.21e-08!52;UBERON:0003080!3.00e-08!40;UBERON:0002780!1.14e-07!39;UBERON:0001890!1.14e-07!39;UBERON:0006240!1.14e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000955,7.75e-15,47;UBERON:0006238,7.75e-15,47;UBERON:0002616,5.49e-13,46;UBERON:0010371,3.05e-11,73;UBERON:0001049,3.52e-11,52;UBERON:0005068,3.52e-11,52;UBERON:0006241,3.52e-11,52;UBERON:0007135,3.52e-11,52;UBERON:0003080,5.49e-11,40;UBERON:0000073,1.15e-10,54;UBERON:0003056,3.88e-10,49;UBERON:0002346,5.48e-10,64;UBERON:0003075,5.48e-10,64;UBERON:0007284,5.48e-10,64;UBERON:0002780,2.29e-09,39;UBERON:0001890,2.29e-09,39;UBERON:0006240,2.29e-09,39;UBERON:0004121,3.83e-09,95;UBERON:0000924,3.83e-09,95;UBERON:0006601,3.83e-09,95;UBERON:0003528,1.18e-08,29;UBERON:0002791,1.18e-08,29;UBERON:0001893,1.18e-08,29;UBERON:0001017,1.60e-08,73;UBERON:0001016,3.21e-08,75;UBERON:0002020,3.56e-07,34|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0,0,0,0,0.725362142011344,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0,0.367472397644862,0.287536413054709,0,0,0.766124028511126,0.46081959976873,0.395658863190582,0.274462930807229,0.52091337055676,0,1.12552522006336,0.61119299110724,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,2.54805239706646,0,0,0.760079596425296,0,0,0,0.29688427812965,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0.441683036920787,0,0,1.75668478206928,1.67557365450764,0,0,0,0,2.24685959107234,4.57500602818627,1.13088916901578,1.56441888173049,4.09144731728529,0.41557608911912,2.92034273521964,0,0.248813941220186,0,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0,0.816437989815934,1.15302348256365,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.536825675041487,1.26173969138476,0.514523061896422,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,0.442830443938806,0,0.246794327843601,0.296452627087149,0,0,0,0,0.241177159752417,1.01850340712568,0,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0.318909537314974,0.327726629431476,0.172684981865896,0.723245292907558,0,0.54390568381871,0.983528546038072,0.827810238914197,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.565815239267694,0,0,0.516856586336442,0,0.356497378384721,0.948110273807448,0,1.03135543248187,2.04263763452273,0.18006109403131,0.646793418913773,0,0.354680467284547,0.178368817602071,0.493647061806363,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,2.14352128823924,1.29171541356724,0.361877549568935,0.358117032009409,0.984845398470368,0,0.370850604021019,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.165306911450672,1.04702376793612,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,1.07184189539533,0,2.25900737046827,0,0,0.515559547031063,1.37016503954128,1.5107877947794,0,0.900642406448441,0.453142408984205,1.55328093525546,0,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0,0.655490552289177,0.256100609619477,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=360 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:17963911..17963928,+ | |||
|id=chr17:17963911..17963928,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.62e-12!63;UBERON:0000955!3.48e-10!50;UBERON:0006238!3.48e-10!50;UBERON:0003056!5.76e-10!49;UBERON:0002616!1.46e-09!49;UBERON:0002346!5.94e-09!71;UBERON:0003075!5.94e-09!71;UBERON:0007284!5.94e-09!71;UBERON:0004121!1.02e-08!102;UBERON:0000924!1.02e-08!102;UBERON:0006601!1.02e-08!102;UBERON:0001049!2.21e-08!52;UBERON:0005068!2.21e-08!52;UBERON:0006241!2.21e-08!52;UBERON:0007135!2.21e-08!52;UBERON:0003080!3.00e-08!40;UBERON:0002780!1.14e-07!39;UBERON:0001890!1.14e-07!39;UBERON:0006240!1.14e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,7.75e-15,47;UBERON:0006238,7.75e-15,47;UBERON:0002616,5.49e-13,46;UBERON:0010371,3.05e-11,73;UBERON:0001049,3.52e-11,52;UBERON:0005068,3.52e-11,52;UBERON:0006241,3.52e-11,52;UBERON:0007135,3.52e-11,52;UBERON:0003080,5.49e-11,40;UBERON:0000073,1.15e-10,54;UBERON:0003056,3.88e-10,49;UBERON:0002346,5.48e-10,64;UBERON:0003075,5.48e-10,64;UBERON:0007284,5.48e-10,64;UBERON:0002780,2.29e-09,39;UBERON:0001890,2.29e-09,39;UBERON:0006240,2.29e-09,39;UBERON:0004121,3.83e-09,95;UBERON:0000924,3.83e-09,95;UBERON:0006601,3.83e-09,95;UBERON:0003528,1.18e-08,29;UBERON:0002791,1.18e-08,29;UBERON:0001893,1.18e-08,29;UBERON:0001017,1.60e-08,73;UBERON:0001016,3.21e-08,75;UBERON:0002020,3.56e-07,34 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0,0,0,0,0.725362142011344,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0,0.367472397644862,0.287536413054709,0,0,0.766124028511126,0.46081959976873,0.395658863190582,0.274462930807229,0.52091337055676,0,1.12552522006336,0.61119299110724,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,2.54805239706646,0,0,0.760079596425296,0,0,0,0.29688427812965,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0.441683036920787,0,0,1.75668478206928,1.67557365450764,0,0,0,0,2.24685959107234,4.57500602818627,1.13088916901578,1.56441888173049,4.09144731728529,0.41557608911912,2.92034273521964,0,0.248813941220186,0,0.210441855886474,0.260240885925407,0.229902104433473,0.360124259610698,0,0.816437989815934,1.15302348256365,0.374806898238915,0.776110112217047,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.536825675041487,1.26173969138476,0.514523061896422,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,0.442830443938806,0,0.246794327843601,0.296452627087149,0,0,0,0,0.241177159752417,1.01850340712568,0,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0.318909537314974,0.327726629431476,0.172684981865896,0.723245292907558,0,0.54390568381871,0.983528546038072,0.827810238914197,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0.565815239267694,0,0,0.516856586336442,0,0.356497378384721,0.948110273807448,0,1.03135543248187,2.04263763452273,0.18006109403131,0.646793418913773,0,0.354680467284547,0.178368817602071,0.493647061806363,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,2.14352128823924,1.29171541356724,0.361877549568935,0.358117032009409,0.984845398470368,0,0.370850604021019,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.539457385539283,0.165306911450672,1.04702376793612,0.388844919875379,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,1.07184189539533,0,2.25900737046827,0,0,0.515559547031063,1.37016503954128,1.5107877947794,0,0.900642406448441,0.453142408984205,1.55328093525546,0,0,0.341467211508268,0.486213434136588,0,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0,0.50695859978048,0,0.655490552289177,0.256100609619477,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0.735994600671987,0,0.532427418478012,0.715308569841963,0.436039249896986,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0,0.999242311751784,0.233931608445408,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p@chr17:17963911..17963928,+ | |||
}} |
Revision as of 13:36, 13 September 2013
Short description: | p@chr17:17963911..17963928, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:17963911..17963928, + |
Coexpression cluster: | MCL_coexpression_mm9:360 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 7.75e-15 | 47 |
future brain | 7.75e-15 | 47 |
regional part of brain | 5.49e-13 | 46 |
ecto-epithelium | 3.05e-11 | 73 |
neural tube | 3.52e-11 | 52 |
neural rod | 3.52e-11 | 52 |
future spinal cord | 3.52e-11 | 52 |
neural keel | 3.52e-11 | 52 |
anterior neural tube | 5.49e-11 | 40 |
regional part of nervous system | 1.15e-10 | 54 |
pre-chordal neural plate | 3.88e-10 | 49 |
neurectoderm | 5.48e-10 | 64 |
neural plate | 5.48e-10 | 64 |
presumptive neural plate | 5.48e-10 | 64 |
regional part of forebrain | 2.29e-09 | 39 |
forebrain | 2.29e-09 | 39 |
future forebrain | 2.29e-09 | 39 |
ectoderm-derived structure | 3.83e-09 | 95 |
ectoderm | 3.83e-09 | 95 |
presumptive ectoderm | 3.83e-09 | 95 |
brain grey matter | 1.18e-08 | 29 |
regional part of telencephalon | 1.18e-08 | 29 |
telencephalon | 1.18e-08 | 29 |
central nervous system | 1.60e-08 | 73 |
nervous system | 3.21e-08 | 75 |
gray matter | 3.56e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.