FFCP PHASE1:Mm9::chr17:32796025..32796036,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=631304|HGNC=|MCL_coexpression_id=126|UniProt=G3UW81|association_with_transcript=-318bp_to_ENSMUST00000165061_5end|description=CAGE_peak_5_at_Cyp4f40_5end|id=chr17:32796025..32796036,+|ontology_enrichment_celltype=CL:0002563!1.53e-17!9;CL:0002251!1.53e-17!9;CL:0000239!9.17e-13!6;CL:0000677!9.17e-13!6;CL:0000212!9.17e-13!6;CL:0000584!9.17e-13!6;CL:0000075!8.03e-11!7;CL:0002076!8.52e-10!15;CL:0000066!1.12e-09!25;CL:0000473!3.51e-07!3;CL:0000627!3.51e-07!3;CL:0000682!3.51e-07!3;CL:0000223!6.55e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,1.05e-14,6;CL:0000677,1.05e-14,6;CL:0000584,1.05e-14,6;CL:0002563,1.33e-13,9;CL:0002251,1.33e-13,9;CL:0000075,1.41e-12,7;CL:0000682,4.53e-11,3;CL:0000066,5.54e-10,25;CL:0002076,5.96e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.36e-35!43;UBERON:0000344!9.74e-30!15;UBERON:0005409!1.05e-27!59;UBERON:0001242!1.11e-25!13;UBERON:0000060!1.11e-25!13;UBERON:0001262!1.11e-25!13;UBERON:0004786!1.11e-25!13;UBERON:0003350!1.53e-17!9;UBERON:0004808!1.53e-17!9;UBERON:0001277!1.53e-17!9;UBERON:0004923!3.98e-17!24;UBERON:0000485!5.12e-14!11;UBERON:0001007!1.87e-11!128;UBERON:0001555!1.87e-11!128;UBERON:0007026!1.87e-11!128;UBERON:0004119!3.74e-11!130;UBERON:0000925!3.74e-11!130;UBERON:0006595!3.74e-11!130;UBERON:0004921!9.62e-10!126;UBERON:0004185!9.62e-10!126;UBERON:0000331!4.61e-08!3;UBERON:0002116!4.61e-08!3;UBERON:0001204!4.61e-08!3;UBERON:0001168!4.61e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.04e-35,31;UBERON:0000344,1.18e-27,15;UBERON:0005409,1.30e-24,47;UBERON:0001242,1.84e-21,13;UBERON:0001262,1.84e-21,13;UBERON:0004786,1.84e-21,13;UBERON:0004923,1.48e-16,24;UBERON:0002108,6.92e-16,4;UBERON:0003350,1.33e-13,9;UBERON:0004808,1.33e-13,9;UBERON:0001277,1.33e-13,9;UBERON:0000331,1.49e-12,3;UBERON:0002116,1.49e-12,3;UBERON:0001204,1.49e-12,3;UBERON:0001168,1.49e-12,3;UBERON:0000485,4.89e-11,11;UBERON:0001007,3.71e-10,116;UBERON:0001555,3.71e-10,116;UBERON:0007026,3.71e-10,116;UBERON:0004119,6.42e-10,118;UBERON:0000925,6.42e-10,118;UBERON:0006595,6.42e-10,118;UBERON:0001155,6.99e-09,2;UBERON:0000059,6.99e-09,2;UBERON:0001962,2.72e-08,2;UBERON:0001961,2.72e-08,2;UBERON:0001744,2.72e-08,2;UBERON:0004921,4.84e-08,114|phase1_expression=0,5.23463111459042,0.909998478779072,1.81478526784098,5.00895729946347,1.34303417529512,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,3.67054849707472,4.01962374880514,2.58457197695445,2.37018355954478,14.6318032981408,12.8535366177565,5.09980174507201,0,0,0,0.288851619751275,1.66234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,3.96675849995316,0,0,0.128867461322093,0.403367049246685,0.889512175379481,1.14135375667535,4.2707615539006,0.329397909448022,0.754005626400808,0.397912944082302,0.58489226135736,4.49409704327111,3.6743468478698,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Cyp4f40}} | ||
|EntrezGene=631304 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=G3UW81 | |||
|association_with_transcript=-318bp_to_ENSMUST00000165061_5end | |||
|description=CAGE_peak_5_at_Cyp4f40_5end | |||
|id=chr17:32796025..32796036,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.53e-17!9;CL:0002251!1.53e-17!9;CL:0000239!9.17e-13!6;CL:0000677!9.17e-13!6;CL:0000212!9.17e-13!6;CL:0000584!9.17e-13!6;CL:0000075!8.03e-11!7;CL:0002076!8.52e-10!15;CL:0000066!1.12e-09!25;CL:0000473!3.51e-07!3;CL:0000627!3.51e-07!3;CL:0000682!3.51e-07!3;CL:0000223!6.55e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.05e-14,6;CL:0000677,1.05e-14,6;CL:0000584,1.05e-14,6;CL:0002563,1.33e-13,9;CL:0002251,1.33e-13,9;CL:0000075,1.41e-12,7;CL:0000682,4.53e-11,3;CL:0000066,5.54e-10,25;CL:0002076,5.96e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.36e-35!43;UBERON:0000344!9.74e-30!15;UBERON:0005409!1.05e-27!59;UBERON:0001242!1.11e-25!13;UBERON:0000060!1.11e-25!13;UBERON:0001262!1.11e-25!13;UBERON:0004786!1.11e-25!13;UBERON:0003350!1.53e-17!9;UBERON:0004808!1.53e-17!9;UBERON:0001277!1.53e-17!9;UBERON:0004923!3.98e-17!24;UBERON:0000485!5.12e-14!11;UBERON:0001007!1.87e-11!128;UBERON:0001555!1.87e-11!128;UBERON:0007026!1.87e-11!128;UBERON:0004119!3.74e-11!130;UBERON:0000925!3.74e-11!130;UBERON:0006595!3.74e-11!130;UBERON:0004921!9.62e-10!126;UBERON:0004185!9.62e-10!126;UBERON:0000331!4.61e-08!3;UBERON:0002116!4.61e-08!3;UBERON:0001204!4.61e-08!3;UBERON:0001168!4.61e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.04e-35,31;UBERON:0000344,1.18e-27,15;UBERON:0005409,1.30e-24,47;UBERON:0001242,1.84e-21,13;UBERON:0001262,1.84e-21,13;UBERON:0004786,1.84e-21,13;UBERON:0004923,1.48e-16,24;UBERON:0002108,6.92e-16,4;UBERON:0003350,1.33e-13,9;UBERON:0004808,1.33e-13,9;UBERON:0001277,1.33e-13,9;UBERON:0000331,1.49e-12,3;UBERON:0002116,1.49e-12,3;UBERON:0001204,1.49e-12,3;UBERON:0001168,1.49e-12,3;UBERON:0000485,4.89e-11,11;UBERON:0001007,3.71e-10,116;UBERON:0001555,3.71e-10,116;UBERON:0007026,3.71e-10,116;UBERON:0004119,6.42e-10,118;UBERON:0000925,6.42e-10,118;UBERON:0006595,6.42e-10,118;UBERON:0001155,6.99e-09,2;UBERON:0000059,6.99e-09,2;UBERON:0001962,2.72e-08,2;UBERON:0001961,2.72e-08,2;UBERON:0001744,2.72e-08,2;UBERON:0004921,4.84e-08,114 | |||
|phase1_expression=0,5.23463111459042,0.909998478779072,1.81478526784098,5.00895729946347,1.34303417529512,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95976510659561,3.67054849707472,4.01962374880514,2.58457197695445,2.37018355954478,14.6318032981408,12.8535366177565,5.09980174507201,0,0,0,0.288851619751275,1.66234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.45567044872489,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,3.96675849995316,0,0,0.128867461322093,0.403367049246685,0.889512175379481,1.14135375667535,4.2707615539006,0.329397909448022,0.754005626400808,0.397912944082302,0.58489226135736,4.49409704327111,3.6743468478698,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Cyp4f40 | |||
}} |
Revision as of 14:07, 13 September 2013
Short description: | p5@Cyp4f40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cyp4f40_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -318bp_to_ENSMUST00000165061_5end |
EntrezGene: | Cyp4f40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.05e-14 | 6 |
gut absorptive cell | 1.05e-14 | 6 |
enterocyte | 1.05e-14 | 6 |
intestinal epithelial cell | 1.33e-13 | 9 |
epithelial cell of alimentary canal | 1.33e-13 | 9 |
columnar/cuboidal epithelial cell | 1.41e-12 | 7 |
M cell of gut | 4.53e-11 | 3 |
epithelial cell | 5.54e-10 | 25 |
endo-epithelial cell | 5.96e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.04e-35 | 31 |
mucosa | 1.18e-27 | 15 |
gastrointestinal system | 1.30e-24 | 47 |
intestinal mucosa | 1.84e-21 | 13 |
wall of intestine | 1.84e-21 | 13 |
gastrointestinal system mucosa | 1.84e-21 | 13 |
organ component layer | 1.48e-16 | 24 |
small intestine | 6.92e-16 | 4 |
epithelium of mucosa | 1.33e-13 | 9 |
gastrointestinal system epithelium | 1.33e-13 | 9 |
intestinal epithelium | 1.33e-13 | 9 |
ileal mucosa | 1.49e-12 | 3 |
ileum | 1.49e-12 | 3 |
mucosa of small intestine | 1.49e-12 | 3 |
wall of small intestine | 1.49e-12 | 3 |
simple columnar epithelium | 4.89e-11 | 11 |
digestive system | 3.71e-10 | 116 |
digestive tract | 3.71e-10 | 116 |
primitive gut | 3.71e-10 | 116 |
endoderm-derived structure | 6.42e-10 | 118 |
endoderm | 6.42e-10 | 118 |
presumptive endoderm | 6.42e-10 | 118 |
colon | 6.99e-09 | 2 |
large intestine | 6.99e-09 | 2 |
gut-associated lymphoid tissue | 2.72e-08 | 2 |
mucosa-associated lymphoid tissue | 2.72e-08 | 2 |
lymphoid tissue | 2.72e-08 | 2 |
subdivision of digestive tract | 4.84e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.