FFCP PHASE1:Mm9::chr17:34484746..34484750,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34484746..34484750,+|id=chr17:34484746..34484750,+|ontology_enrichment_celltype=CL:0002563!4.93e-16!9;CL:0002251!4.93e-16!9;CL:0000239!1.38e-11!6;CL:0000677!1.38e-11!6;CL:0000212!1.38e-11!6;CL:0000584!1.38e-11!6;CL:0000075!6.01e-10!7;CL:0000066!1.81e-09!25;CL:0002076!2.02e-09!15;CL:0000223!6.23e-07!20|ontology_enrichment_celltype_v019_2=CL:0000239,2.21e-15,6;CL:0000677,2.21e-15,6;CL:0000584,2.21e-15,6;CL:0000075,2.39e-13,7;CL:0002563,1.26e-10,9;CL:0002251,1.26e-10,9;CL:0002076,8.85e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.94e-38!15;UBERON:0001242!9.06e-31!13;UBERON:0000060!9.06e-31!13;UBERON:0001262!9.06e-31!13;UBERON:0004786!9.06e-31!13;UBERON:0004923!4.37e-27!24;UBERON:0003350!4.93e-16!9;UBERON:0004808!4.93e-16!9;UBERON:0001277!4.93e-16!9;UBERON:0000331!6.29e-14!3;UBERON:0002116!6.29e-14!3;UBERON:0001204!6.29e-14!3;UBERON:0001168!6.29e-14!3;UBERON:0000485!4.95e-13!11;UBERON:0001962!2.68e-09!2;UBERON:0001961!2.68e-09!2;UBERON:0001744!2.68e-09!2;UBERON:0000160!3.52e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0000331,4.03e-30,3;UBERON:0002116,4.03e-30,3;UBERON:0001204,4.03e-30,3;UBERON:0001168,4.03e-30,3;UBERON:0001242,1.91e-27,13;UBERON:0001262,1.91e-27,13;UBERON:0004786,1.91e-27,13;UBERON:0000344,6.31e-24,15;UBERON:0002108,6.55e-23,4;UBERON:0004923,2.55e-15,24;UBERON:0000160,4.61e-12,31;UBERON:0003350,1.26e-10,9;UBERON:0004808,1.26e-10,9;UBERON:0001277,1.26e-10,9;UBERON:0000485,6.95e-09,11;UBERON:0005409,3.12e-08,47|phase1_expression=0,1.04692622291808,0,2.72217790176147,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.935476191661768,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0.215471232685889,4.56056206695297,6.04872311423834,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:34484746..34484750,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:34484746..34484750,+ | |||
|id=chr17:34484746..34484750,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.93e-16!9;CL:0002251!4.93e-16!9;CL:0000239!1.38e-11!6;CL:0000677!1.38e-11!6;CL:0000212!1.38e-11!6;CL:0000584!1.38e-11!6;CL:0000075!6.01e-10!7;CL:0000066!1.81e-09!25;CL:0002076!2.02e-09!15;CL:0000223!6.23e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.21e-15,6;CL:0000677,2.21e-15,6;CL:0000584,2.21e-15,6;CL:0000075,2.39e-13,7;CL:0002563,1.26e-10,9;CL:0002251,1.26e-10,9;CL:0002076,8.85e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.94e-38!15;UBERON:0001242!9.06e-31!13;UBERON:0000060!9.06e-31!13;UBERON:0001262!9.06e-31!13;UBERON:0004786!9.06e-31!13;UBERON:0004923!4.37e-27!24;UBERON:0003350!4.93e-16!9;UBERON:0004808!4.93e-16!9;UBERON:0001277!4.93e-16!9;UBERON:0000331!6.29e-14!3;UBERON:0002116!6.29e-14!3;UBERON:0001204!6.29e-14!3;UBERON:0001168!6.29e-14!3;UBERON:0000485!4.95e-13!11;UBERON:0001962!2.68e-09!2;UBERON:0001961!2.68e-09!2;UBERON:0001744!2.68e-09!2;UBERON:0000160!3.52e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,4.03e-30,3;UBERON:0002116,4.03e-30,3;UBERON:0001204,4.03e-30,3;UBERON:0001168,4.03e-30,3;UBERON:0001242,1.91e-27,13;UBERON:0001262,1.91e-27,13;UBERON:0004786,1.91e-27,13;UBERON:0000344,6.31e-24,15;UBERON:0002108,6.55e-23,4;UBERON:0004923,2.55e-15,24;UBERON:0000160,4.61e-12,31;UBERON:0003350,1.26e-10,9;UBERON:0004808,1.26e-10,9;UBERON:0001277,1.26e-10,9;UBERON:0000485,6.95e-09,11;UBERON:0005409,3.12e-08,47 | |||
|phase1_expression=0,1.04692622291808,0,2.72217790176147,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.935476191661768,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0.215471232685889,4.56056206695297,6.04872311423834,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:34484746..34484750,+ | |||
}} |
Revision as of 14:14, 13 September 2013
Short description: | p@chr17:34484746..34484750, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34484746..34484750, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.21e-15 | 6 |
gut absorptive cell | 2.21e-15 | 6 |
enterocyte | 2.21e-15 | 6 |
columnar/cuboidal epithelial cell | 2.39e-13 | 7 |
intestinal epithelial cell | 1.26e-10 | 9 |
epithelial cell of alimentary canal | 1.26e-10 | 9 |
endo-epithelial cell | 8.85e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 4.03e-30 | 3 |
ileum | 4.03e-30 | 3 |
mucosa of small intestine | 4.03e-30 | 3 |
wall of small intestine | 4.03e-30 | 3 |
intestinal mucosa | 1.91e-27 | 13 |
wall of intestine | 1.91e-27 | 13 |
gastrointestinal system mucosa | 1.91e-27 | 13 |
mucosa | 6.31e-24 | 15 |
small intestine | 6.55e-23 | 4 |
organ component layer | 2.55e-15 | 24 |
intestine | 4.61e-12 | 31 |
epithelium of mucosa | 1.26e-10 | 9 |
gastrointestinal system epithelium | 1.26e-10 | 9 |
intestinal epithelium | 1.26e-10 | 9 |
simple columnar epithelium | 6.95e-09 | 11 |
gastrointestinal system | 3.12e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.