FFCP PHASE1:Mm9::chr17:34492178..34492196,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=177|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34492178..34492196,+|id=chr17:34492178..34492196,+|ontology_enrichment_celltype=CL:0000553!6.54e-08!6;CL:0000556!6.54e-08!6;CL:0000988!2.51e-07!32;CL:0002032!2.51e-07!32;CL:0000037!2.51e-07!32;CL:0000566!2.51e-07!32;CL:0000837!2.51e-07!32|ontology_enrichment_celltype_v019_2=CL:0000553,1.93e-09,6;CL:0000556,1.93e-09,6;CL:0000945,1.38e-07,1;CL:0000236,1.38e-07,1;CL:0000826,1.38e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.06e-18,3;DOID:4045,3.06e-18,3;DOID:0050686,2.06e-09,6|ontology_enrichment_uberon=UBERON:0002106!6.69e-10!6;UBERON:0004457!6.69e-10!6;UBERON:0000042!6.69e-10!6;UBERON:0004854!6.69e-10!6;UBERON:0009034!6.69e-10!6;UBERON:0002095!6.69e-10!6;UBERON:0004782!6.69e-10!6;UBERON:0003281!6.69e-10!6;UBERON:0009664!6.69e-10!6;UBERON:0002296!6.69e-10!6;UBERON:0005602!6.69e-10!6;UBERON:0001179!6.69e-10!6;UBERON:0006293!6.69e-10!6;UBERON:0003887!2.03e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0001044,8.26e-07,1;UBERON:0001736,8.26e-07,1;UBERON:0003293,8.26e-07,1;UBERON:0003294,8.26e-07,1;UBERON:0001829,8.26e-07,1;UBERON:0010047,8.26e-07,1;UBERON:0000167,8.26e-07,1;UBERON:0006298,8.26e-07,1|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.34968160967599,0,0.404950534779652,0.699561878128147,5.36285681109004,4.11343300817216,2.54633791078818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,6.2506827561904,1.57057123192139,7.64700934440319,6.83045484958446,5.82612423637384,0,0,0,0,0,0,0,0,0,10.5703041816374,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,12.9468941823586,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,1.47802552133284,0,0,0,0,0,0,0,0.472905432318573,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,1.87957968877638,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr17:34492178..34492196,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:34492178..34492196,+ | |||
|id=chr17:34492178..34492196,+ | |||
|ontology_enrichment_celltype=CL:0000553!6.54e-08!6;CL:0000556!6.54e-08!6;CL:0000988!2.51e-07!32;CL:0002032!2.51e-07!32;CL:0000037!2.51e-07!32;CL:0000566!2.51e-07!32;CL:0000837!2.51e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.93e-09,6;CL:0000556,1.93e-09,6;CL:0000945,1.38e-07,1;CL:0000236,1.38e-07,1;CL:0000826,1.38e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.06e-18,3;DOID:4045,3.06e-18,3;DOID:0050686,2.06e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!6.69e-10!6;UBERON:0004457!6.69e-10!6;UBERON:0000042!6.69e-10!6;UBERON:0004854!6.69e-10!6;UBERON:0009034!6.69e-10!6;UBERON:0002095!6.69e-10!6;UBERON:0004782!6.69e-10!6;UBERON:0003281!6.69e-10!6;UBERON:0009664!6.69e-10!6;UBERON:0002296!6.69e-10!6;UBERON:0005602!6.69e-10!6;UBERON:0001179!6.69e-10!6;UBERON:0006293!6.69e-10!6;UBERON:0003887!2.03e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-07,1;UBERON:0001097,1.20e-07,1;UBERON:0003968,1.20e-07,1;UBERON:0001467,1.20e-07,1;UBERON:0001044,8.26e-07,1;UBERON:0001736,8.26e-07,1;UBERON:0003293,8.26e-07,1;UBERON:0003294,8.26e-07,1;UBERON:0001829,8.26e-07,1;UBERON:0010047,8.26e-07,1;UBERON:0000167,8.26e-07,1;UBERON:0006298,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.34968160967599,0,0.404950534779652,0.699561878128147,5.36285681109004,4.11343300817216,2.54633791078818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,6.2506827561904,1.57057123192139,7.64700934440319,6.83045484958446,5.82612423637384,0,0,0,0,0,0,0,0,0,10.5703041816374,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,12.9468941823586,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.264450566663544,0,0,0,0,0,0.380451252225118,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,1.47802552133284,0,0,0,0,0,0,0,0.472905432318573,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,1.87957968877638,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:34492178..34492196,+ | |||
}} |
Revision as of 14:14, 13 September 2013
Short description: | p@chr17:34492178..34492196, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34492178..34492196, + |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.93e-09 | 6 |
megakaryocyte | 1.93e-09 | 6 |
lymphocyte of B lineage | 1.38e-07 | 1 |
B cell | 1.38e-07 | 1 |
pro-B cell | 1.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.20e-07 | 1 |
axillary lymph node | 1.20e-07 | 1 |
peripheral lymph node | 1.20e-07 | 1 |
shoulder | 1.20e-07 | 1 |
saliva-secreting gland | 8.26e-07 | 1 |
submandibular gland | 8.26e-07 | 1 |
gland of oral region | 8.26e-07 | 1 |
gland of foregut | 8.26e-07 | 1 |
major salivary gland | 8.26e-07 | 1 |
oral gland | 8.26e-07 | 1 |
oral cavity | 8.26e-07 | 1 |
submandibular gland primordium | 8.26e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.06e-18 | 3 |
muscle cancer | 3.06e-18 | 3 |
organ system cancer | 2.06e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.