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FFCP PHASE1:Mm9::chr17:34999067..34999183,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=14962|HGNC=|MCL_coexpression_id=8|UniProt=B8JJM6|association_with_transcript=0bp_to_ENSMUST00000154526_5end|description=CAGE_peak_1_at_Cfb_5end|id=chr17:34999067..34999183,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!6.00e-15!25;UBERON:0002330!6.00e-15!25;UBERON:0002107!1.41e-14!22;UBERON:0007499!1.41e-14!22;UBERON:0006925!1.41e-14!22;UBERON:0009497!1.41e-14!22;UBERON:0000015!1.41e-14!22;UBERON:0002423!1.41e-14!22;UBERON:0006235!1.41e-14!22;UBERON:0008835!1.41e-14!22;UBERON:0003894!1.41e-14!22;UBERON:0004161!1.41e-14!22;UBERON:0008836!1.41e-14!22;UBERON:0009854!1.94e-14!23;UBERON:0009856!1.94e-14!23;UBERON:0005172!3.47e-13!49;UBERON:0005173!3.47e-13!49;UBERON:0002417!3.47e-13!49;UBERON:0000916!3.47e-13!49;UBERON:0005256!8.41e-11!47;UBERON:0004119!1.55e-10!130;UBERON:0000925!1.55e-10!130;UBERON:0006595!1.55e-10!130;UBERON:0001007!1.73e-10!128;UBERON:0001555!1.73e-10!128;UBERON:0007026!1.73e-10!128;UBERON:0009569!3.45e-10!66;UBERON:0004921!7.07e-10!126;UBERON:0004185!7.07e-10!126;UBERON:0005177!7.68e-09!85;UBERON:0002100!6.05e-08!98;UBERON:0003914!4.46e-07!47;UBERON:0005409!9.29e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.88e-16,25;UBERON:0002330,8.88e-16,25;UBERON:0002107,2.19e-15,22;UBERON:0007499,2.19e-15,22;UBERON:0006925,2.19e-15,22;UBERON:0009497,2.19e-15,22;UBERON:0000015,2.19e-15,22;UBERON:0002423,2.19e-15,22;UBERON:0006235,2.19e-15,22;UBERON:0008835,2.19e-15,22;UBERON:0003894,2.19e-15,22;UBERON:0004161,2.19e-15,22;UBERON:0008836,2.19e-15,22;UBERON:0009854,3.09e-15,23;UBERON:0009856,3.09e-15,23;UBERON:0005172,4.46e-14,49;UBERON:0005173,4.46e-14,49;UBERON:0002417,4.46e-14,49;UBERON:0000916,4.46e-14,49;UBERON:0005256,2.97e-12,45;UBERON:0003104,1.21e-10,61;UBERON:0009142,1.21e-10,61;UBERON:0005177,1.66e-10,79;UBERON:0009569,4.07e-10,66;UBERON:0004119,4.96e-10,118;UBERON:0000925,4.96e-10,118;UBERON:0006595,4.96e-10,118;UBERON:0001007,5.45e-10,116;UBERON:0001555,5.45e-10,116;UBERON:0007026,5.45e-10,116;UBERON:0002100,8.57e-10,90;UBERON:0004921,2.27e-09,114;UBERON:0005409,1.00e-06,47|phase1_expression=0.160148847104794,94.5723354702669,95.094841032413,9.37639055051173,12.0214975187123,22.831580980017,23.5948767001481,0,0,0,0,0,0,0,3.99731714178795,1.61980213911861,0.699561878128147,1.26184866143295,0.548457734422955,2.97072756258621,97.3745672229749,0,0,37.2782345108638,49.0935861483744,59.7201242679621,60.3066794622705,51.7130958446134,46.1756909278989,36.7963989449499,33.0378460876404,0,0,0,12.7094712690561,10.472782657585,8.77928231928187,0,2.3440060335714,0.523523743973798,0.588231488031014,0,1.45653105909346,47.8407908307194,43.6934573556108,2.20256102594018,3.12956537739216,0,0.659058548203415,0,0.979904951377538,0,0.503347818173209,0,0,0.257259436035947,1.71920063963254,1.03134418455488,0,0,0,0,0,25.1971920838792,45.4878526780808,24.1563239081674,0,0.384218305321555,0,0,0,0.285650984403804,0.883474163806454,0.367472397644862,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0.745597783301202,0.984440513331393,0.453429360640713,24.6384815396426,1103.92383416712,1864.48139702665,1435.61048975659,1969.47232128389,1614.2408742117,372.739491029669,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0,629.609912770897,133.611947961941,18.5552673831031,5.72501578328248,11.8741536541735,32.9780161076164,21.7040602395776,24.3408623770909,14.0746582289237,78.8551947072653,50.754374278889,6.19227386364912,2.58826959915855,3.5334642953663,4.363877278217,11.1835056730873,0,0,29.8884754594052,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,3.1570202793598,9.70374370758726,15.4160882644542,6.94458124425364,0.130120442962704,0.229902104433473,0.360124259610698,13.2620239695429,0.612328492361951,0.384341160854549,0.562210347358373,1.55222022443409,0.215567992932842,0.189106080167819,0,0,0.834141747676794,1.0447564995665,2.05782136407943,0,0,0.257347907114715,0.284163499395593,0.621377317606506,2.11073453982987,0.180062061461015,0,0.590292695242212,0.462801338662135,0,0.536546802799238,0.700592054203017,2.46839774870221,0.656669856316381,1.29710095273369,0.877199924551994,9.66020507280623,3.89198614405078,0,0.205809224758569,24.4509899408011,39.6675849995316,1.2797295032114,5.57368012465052,5.02583099156164,8.0673409849337,9.33987784148455,15.0278244628922,36.5387377389274,19.9285735216053,22.6201687920243,22.48208134065,16.7669114922443,26.9645822596266,20.1008386383466,18.7192796859105,1.32767530667157,3.99869794134051,0,2.8511185898344,1.35766741017338,3.22624771495465,16.1253169666856,49.8922300171055,41.4476641501229,56.6392982401064,1716.46071083459,39.8759802661465,68.2059713042814,106.809503382806,178.111186579106,309.430295962351,524.529254669725,757.216233770534,791.219906662173,1206.69741096162,1180.33697558958,1729.7111247632,2071.93014948068,1427.5758181570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|EntrezGene=14962
|HGNC=
|MCL_coexpression_id=8
|UniProt=B8JJM6
|association_with_transcript=0bp_to_ENSMUST00000154526_5end
|description=CAGE_peak_1_at_Cfb_5end
|id=chr17:34999067..34999183,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.88e-16,25;UBERON:0002330,8.88e-16,25;UBERON:0002107,2.19e-15,22;UBERON:0007499,2.19e-15,22;UBERON:0006925,2.19e-15,22;UBERON:0009497,2.19e-15,22;UBERON:0000015,2.19e-15,22;UBERON:0002423,2.19e-15,22;UBERON:0006235,2.19e-15,22;UBERON:0008835,2.19e-15,22;UBERON:0003894,2.19e-15,22;UBERON:0004161,2.19e-15,22;UBERON:0008836,2.19e-15,22;UBERON:0009854,3.09e-15,23;UBERON:0009856,3.09e-15,23;UBERON:0005172,4.46e-14,49;UBERON:0005173,4.46e-14,49;UBERON:0002417,4.46e-14,49;UBERON:0000916,4.46e-14,49;UBERON:0005256,2.97e-12,45;UBERON:0003104,1.21e-10,61;UBERON:0009142,1.21e-10,61;UBERON:0005177,1.66e-10,79;UBERON:0009569,4.07e-10,66;UBERON:0004119,4.96e-10,118;UBERON:0000925,4.96e-10,118;UBERON:0006595,4.96e-10,118;UBERON:0001007,5.45e-10,116;UBERON:0001555,5.45e-10,116;UBERON:0007026,5.45e-10,116;UBERON:0002100,8.57e-10,90;UBERON:0004921,2.27e-09,114;UBERON:0005409,1.00e-06,47
|phase1_expression=0.160148847104794,94.5723354702669,95.094841032413,9.37639055051173,12.0214975187123,22.831580980017,23.5948767001481,0,0,0,0,0,0,0,3.99731714178795,1.61980213911861,0.699561878128147,1.26184866143295,0.548457734422955,2.97072756258621,97.3745672229749,0,0,37.2782345108638,49.0935861483744,59.7201242679621,60.3066794622705,51.7130958446134,46.1756909278989,36.7963989449499,33.0378460876404,0,0,0,12.7094712690561,10.472782657585,8.77928231928187,0,2.3440060335714,0.523523743973798,0.588231488031014,0,1.45653105909346,47.8407908307194,43.6934573556108,2.20256102594018,3.12956537739216,0,0.659058548203415,0,0.979904951377538,0,0.503347818173209,0,0,0.257259436035947,1.71920063963254,1.03134418455488,0,0,0,0,0,25.1971920838792,45.4878526780808,24.1563239081674,0,0.384218305321555,0,0,0,0.285650984403804,0.883474163806454,0.367472397644862,0.191690942036473,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0.745597783301202,0.984440513331393,0.453429360640713,24.6384815396426,1103.92383416712,1864.48139702665,1435.61048975659,1969.47232128389,1614.2408742117,372.739491029669,0,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0,629.609912770897,133.611947961941,18.5552673831031,5.72501578328248,11.8741536541735,32.9780161076164,21.7040602395776,24.3408623770909,14.0746582289237,78.8551947072653,50.754374278889,6.19227386364912,2.58826959915855,3.5334642953663,4.363877278217,11.1835056730873,0,0,29.8884754594052,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,3.1570202793598,9.70374370758726,15.4160882644542,6.94458124425364,0.130120442962704,0.229902104433473,0.360124259610698,13.2620239695429,0.612328492361951,0.384341160854549,0.562210347358373,1.55222022443409,0.215567992932842,0.189106080167819,0,0,0.834141747676794,1.0447564995665,2.05782136407943,0,0,0.257347907114715,0.284163499395593,0.621377317606506,2.11073453982987,0.180062061461015,0,0.590292695242212,0.462801338662135,0,0.536546802799238,0.700592054203017,2.46839774870221,0.656669856316381,1.29710095273369,0.877199924551994,9.66020507280623,3.89198614405078,0,0.205809224758569,24.4509899408011,39.6675849995316,1.2797295032114,5.57368012465052,5.02583099156164,8.0673409849337,9.33987784148455,15.0278244628922,36.5387377389274,19.9285735216053,22.6201687920243,22.48208134065,16.7669114922443,26.9645822596266,20.1008386383466,18.7192796859105,1.32767530667157,3.99869794134051,0,2.8511185898344,1.35766741017338,3.22624771495465,16.1253169666856,49.8922300171055,41.4476641501229,56.6392982401064,1716.46071083459,39.8759802661465,68.2059713042814,106.809503382806,178.111186579106,309.430295962351,524.529254669725,757.216233770534,791.219906662173,1206.69741096162,1180.33697558958,1729.7111247632,2071.93014948068,1427.57581815708,1117.10769400095,1472.417627201,27.7129785249907,0.757965647081939,0.651859905768103,0.339490171550376,0.234690248288502,1.00503754465089,8.33152743101048,4.68320754858717,5.04432461139811,3.98636441367795,3.50800491046472,14.7476983244164,18.6499780415167,18.5150794984335,28.6503439484617,224.089141733308,28.0305635620851,37.8033342437484,0.160550589987792,0,0,7.57412781613119,3.47059041357882,0,0.430846795465598,0,0.445597348164788,4.24614796183249,1.21443210502468,0.876767573733936,0.395287777946524,0,17.1747503102005,21.3678724400706,1.95464351224291,224.689307488593,15.9294166007955,1.45668381692989,3.02323556964751,1.13163047853539,2.65771703592696,3.99665692327106,9.56184684722418,11.9966130727577,8.55593708123331,10.4292130118819,8.4334886859999,12.3762651897824,1.36175842301515,0,0.129358683782755,0,0.354680467284547,0.713475270408282,0.164549020602121,0.304464949114599,7.04015124191131,2.96564899209348,3.30792597082443,23.2489616647487,2.09903754704677,3.19658502119226,5.61050016814741,4.59594519286172,20.6951394007194,0.370850604021019,36.2246267291448,2.47664241555867,3.33350149265481,6.02779062415011,16.8133900096861,27.9109371311958,0,0,0,5.72802370809068,0.949007980743406,3.25311147402958,3.67218158794124,3.76358932826044,12.6650286972783,40.7290326082159,162.414040500285,8.11443420150492,11.1468877030942,18.0188400795208,0,0,0,0.194451188344048,0.904118764344118,0.168956125490778,0,28.644964665669,0.209718688851422,0.724752362478018,2.59227005632079,6.32022241256356,0.202725215290164,0.513554785824136,0.909445760844565,0.537080087002444,1.39076948346885,1.80293174279953,3.69223817936443,2.42319479875554,1.905170166375,2.01652370273681,4.77543615624787,2.98256709085021,2.92192255453922,2.72076460338254,0,0,0,23.7623200659594,43.7300167801254,492.311566030409,69.8840915797755,7.52358156053045,0,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,2.79317411380722,9.04888110496911,37.195327711449,15.7209871970987,27.7603697759521,49.116526844157,45.1216775353178,40.4358204085687,44.980103693956,44.8658360805724,47.3452116879051,56.4658290043391,50.8359710094662,50.0837289292948,53.8211871149873,42.0660103179825,42.0542100610877,45.3294490883637,51.2252242067703,48.3445645863436,46.3211854075871,51.979089408516,49.7084744882564,48.7486590551413,51.1072231665726,45.0002813267021,52.8770119990064,47.2598316183599,34.229678571122,44.0135917240686,44.0315036218769,54.4277287415687,51.2840944325547,59.4152361821915,1.24905288968973,79.068883654548,70.4777057278418,3.25190164517034,22.2797333310711,8.57910991795559
|short_description=p1@Cfb
}}

Revision as of 14:18, 13 September 2013

Short description:p1@Cfb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cfb_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000154526_5end
EntrezGene:Cfb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cfb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I594.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I695.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.59
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A397.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D249.09
GP2+ M cell, pool1.CNhs13228.11845-124H959.72
GP2+ M cell, pool2.CNhs13231.11846-124I160.31
GP2+ M cell, pool3.CNhs13240.11847-124I251.71
Ileum epithelium, pool1.CNhs13199.10252-104B946.18
Ileum epithelium, pool2.CNhs13232.10253-104C136.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C833.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D847.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D943.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C725.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E745.49
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.16
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71103.92
Mouse hepatocyte, donor1.CNhs13078.11714-123C41864.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C81435.61
Mouse hepatocyte, donor6.CNhs13090.11822-124F41969.47
Mouse hepatocyte, donor8.CNhs13091.11824-124F61614.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7372.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6629.61
accessory axillary lymph node, adult.CNhs10475.1063-29H9133.61
adrenal gland, adult.CNhs10508.49-24D718.56
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I132.98
adrenal gland, embryo E18.CNhs11026.1262-18F521.70
adrenal gland, neonate N00.CNhs11191.1311-23C124.34
adrenal gland, neonate N25.CNhs11223.1377-27I314.07
amnion, adult pregnant day17.5.CNhs10488.583-22A878.86
aorta, adult.CNhs10498.46-23H150.75
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H729.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B215.42
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D413.26
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D23.89
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I324.45
intestine, adult.CNhs10496.178-9A339.67
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F715.03
intestine, neonate N00.CNhs11126.644-26D136.54
intestine, neonate N01.CNhs11192.1322-23E919.93
intestine, neonate N06.CNhs11102.688-20B822.62
intestine, neonate N07.CNhs11095.720-20F222.48
intestine, neonate N10.CNhs11098.755-23A516.77
intestine, neonate N20.CNhs11187.827-18D126.96
intestine, neonate N25.CNhs11121.1352-25E320.10
intestine, neonate N30.CNhs11131.1384-42G118.72
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G73.23
kidney, neonate N10.CNhs11206.758-6D516.13
kidney, neonate N20.CNhs11113.832-19I149.89
kidney, neonate N25.CNhs11122.1353-25F341.45
kidney, neonate N30.CNhs11203.1385-42H156.64
liver, adult pregnant day01.CNhs10466.508-5B21716.46
liver, embryo E12.CNhs10601.355-15F839.88
liver, embryo E13.CNhs10524.378-3H668.21
liver, embryo E14.CNhs10594.409-16E1106.81
liver, embryo E15.CNhs10520.433-16D7178.11
liver, embryo E16.CNhs10523.462-17F5309.43
liver, embryo E17.CNhs10510.481-18A3524.53
liver, embryo E18.CNhs10579.499-43G4757.22
liver, neonate N00.CNhs11117.641-24F4791.22
liver, neonate N03.CNhs11123.1345-25G21206.70
liver, neonate N06.CNhs11101.684-20A81180.34
liver, neonate N07.CNhs11103.716-20H21729.71
liver, neonate N10.CNhs11115.751-24B92071.93
liver, neonate N20.CNhs11220.823-25A31427.58
liver, neonate N25.CNhs11198.1368-26H11117.11
liver, neonate N30.CNhs11106.1382-42D11472.42
lung, adult.CNhs10474.28-22B127.71
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A414.75
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H218.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1224.09
mammary gland, adult lactating day02.CNhs10480.595-22B628.03
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H721.37
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G6224.69
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G99.56
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C323.25
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H33.20
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I120.70
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G236.22
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H116.81
spleen, neonate N25.CNhs11099.1354-25G327.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B840.73
stomach, neonate N07.CNhs11210.718-18A9162.41
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I428.64
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E423.76
uterus, adult pregnant day19.CNhs10497.590-15F543.73
uterus, adult.CNhs10509.92-27E5492.31
vagina, adult.CNhs10502.89-27D569.88
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D237.20
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F227.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G549.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G545.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G540.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G544.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G544.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G547.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G556.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G550.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G553.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G542.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G545.33
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G551.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G548.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G546.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G551.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G549.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G548.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G551.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G545.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G552.88
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G547.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G534.23
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G544.01
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G544.03
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G554.43
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G551.28
whole body, embryo E17.5.CNhs10513.490-9F959.42
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B379.07
whole body, neonate N00.CNhs10525.657-19C270.48
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D122.28
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland8.88e-1625
exocrine system8.88e-1625
liver2.19e-1522
epithelial sac2.19e-1522
digestive gland2.19e-1522
epithelium of foregut-midgut junction2.19e-1522
anatomical boundary2.19e-1522
hepatobiliary system2.19e-1522
foregut-midgut junction2.19e-1522
hepatic diverticulum2.19e-1522
liver primordium2.19e-1522
septum transversum2.19e-1522
liver bud2.19e-1522
digestive tract diverticulum3.09e-1523
sac3.09e-1523
abdomen element4.46e-1449
abdominal segment element4.46e-1449
abdominal segment of trunk4.46e-1449
abdomen4.46e-1449
trunk mesenchyme2.97e-1245
mesenchyme1.21e-1061
entire embryonic mesenchyme1.21e-1061
trunk region element1.66e-1079
subdivision of trunk4.07e-1066
endoderm-derived structure4.96e-10118
endoderm4.96e-10118
presumptive endoderm4.96e-10118
digestive system5.45e-10116
digestive tract5.45e-10116
primitive gut5.45e-10116
trunk8.57e-1090
subdivision of digestive tract2.27e-09114
gastrointestinal system1.00e-0647







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