FFCP PHASE1:Hg19::chr5:153854787..153854796,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C360|description=CAGE_peak_at_chr5:153854787..153854796,-|id=chr5:153854787..153854796,-|ontology_enrichment_celltype=CL:0000349!1.04e-26!3;CL:0002577!1.04e-26!3;CL:0002537!9.76e-08!5|ontology_enrichment_celltype_v019=CL:0002577;1.42e-117;3!CL:0000349;1.73e-19;19|ontology_enrichment_celltype_v019_2=CL:0002577,7.78e-118,3;CL:0000349,1.58e-19,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3095!3.90e-13!22;DOID:2994!3.90e-13!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.54e-21!14;UBERON:0000158!1.54e-21!14;UBERON:0001987!3.41e-20!4;UBERON:0004340!3.41e-20!4;UBERON:0000478!2.22e-12!24;UBERON:0003124!8.82e-12!7;UBERON:0000305!2.08e-11!7;UBERON:0004923!1.22e-10!57;UBERON:0004871!4.79e-10!8;UBERON:0002084!6.31e-10!1;UBERON:0002082!6.31e-10!1;UBERON:0004706!6.31e-10!1;UBERON:0002146!1.15e-09!1;UBERON:0005623!1.15e-09!1;UBERON:0000013!9.76e-08!5;UBERON:0002410!9.76e-08!5|ontology_enrichment_uberon_v019=UBERON:0001987;1.64e-88;4!UBERON:0000478;1.28e-15;24!UBERON:0000077;5.54e-14;27!UBERON:0000474;1.90e-08;37!UBERON:0003100;2.86e-07;41!UBERON:0001871;5.86e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.04e-88,4;UBERON:0004340,1.04e-88,4;UBERON:0003124,3.24e-51,7;UBERON:0005631,3.76e-26,14;UBERON:0000158,3.76e-26,14;UBERON:0000995,9.30e-18,21;UBERON:0005795,5.41e-17,22;UBERON:0003975,5.41e-17,22;UBERON:0000478,1.19e-15,24;UBERON:0004175,4.61e-15,25;UBERON:0000077,4.18e-13,29;UBERON:0003134,1.89e-10,37;UBERON:0000474,1.89e-10,37;UBERON:0003100,1.65e-09,41;UBERON:0006554,2.16e-08,47;UBERON:0003133,3.11e-08,48;UBERON:0001008,3.11e-08,48;UBERON:0001871,6.39e-07,6;UBERON:0005156,7.84e-07,59;UBERON:0000990,7.84e-07,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,2.91406552326305,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:153854787..153854796,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr5:153854787..153854796,- | |||
|id=chr5:153854787..153854796,- | |||
|ontology_enrichment_celltype=CL:0000349!1.04e-26!3;CL:0002577!1.04e-26!3;CL:0002537!9.76e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.42e-117;3!CL:0000349;1.73e-19;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.78e-118,3;CL:0000349,1.58e-19,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!3.90e-13!22;DOID:2994!3.90e-13!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.54e-21!14;UBERON:0000158!1.54e-21!14;UBERON:0001987!3.41e-20!4;UBERON:0004340!3.41e-20!4;UBERON:0000478!2.22e-12!24;UBERON:0003124!8.82e-12!7;UBERON:0000305!2.08e-11!7;UBERON:0004923!1.22e-10!57;UBERON:0004871!4.79e-10!8;UBERON:0002084!6.31e-10!1;UBERON:0002082!6.31e-10!1;UBERON:0004706!6.31e-10!1;UBERON:0002146!1.15e-09!1;UBERON:0005623!1.15e-09!1;UBERON:0000013!9.76e-08!5;UBERON:0002410!9.76e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.64e-88;4!UBERON:0000478;1.28e-15;24!UBERON:0000077;5.54e-14;27!UBERON:0000474;1.90e-08;37!UBERON:0003100;2.86e-07;41!UBERON:0001871;5.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.04e-88,4;UBERON:0004340,1.04e-88,4;UBERON:0003124,3.24e-51,7;UBERON:0005631,3.76e-26,14;UBERON:0000158,3.76e-26,14;UBERON:0000995,9.30e-18,21;UBERON:0005795,5.41e-17,22;UBERON:0003975,5.41e-17,22;UBERON:0000478,1.19e-15,24;UBERON:0004175,4.61e-15,25;UBERON:0000077,4.18e-13,29;UBERON:0003134,1.89e-10,37;UBERON:0000474,1.89e-10,37;UBERON:0003100,1.65e-09,41;UBERON:0006554,2.16e-08,47;UBERON:0003133,3.11e-08,48;UBERON:0001008,3.11e-08,48;UBERON:0001871,6.39e-07,6;UBERON:0005156,7.84e-07,59;UBERON:0000990,7.84e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,2.91406552326305,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:153854787..153854796,- | |||
}} |
Revision as of 14:21, 13 September 2013
Short description: | p@chr5:153854787..153854796, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:153854787..153854796, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.78e-118 | 3 |
extraembryonic cell | 1.58e-19 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.04e-88 | 4 |
allantois | 1.04e-88 | 4 |
chorion | 3.24e-51 | 7 |
extraembryonic membrane | 3.76e-26 | 14 |
membranous layer | 3.76e-26 | 14 |
uterus | 9.30e-18 | 21 |
embryonic uterus | 5.41e-17 | 22 |
internal female genitalia | 5.41e-17 | 22 |
extraembryonic structure | 1.19e-15 | 24 |
internal genitalia | 4.61e-15 | 25 |
mixed endoderm/mesoderm-derived structure | 4.18e-13 | 29 |
female reproductive organ | 1.89e-10 | 37 |
female reproductive system | 1.89e-10 | 37 |
female organism | 1.65e-09 | 41 |
urinary system structure | 2.16e-08 | 47 |
reproductive organ | 3.11e-08 | 48 |
renal system | 3.11e-08 | 48 |
temporal lobe | 6.39e-07 | 6 |
reproductive structure | 7.84e-07 | 59 |
reproductive system | 7.84e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.