FFCP PHASE1:Mm9::chr17:47573550..47573557,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224833|HGNC=|UniProt=Q91Z58|association_with_transcript=-6bp_to_ENSMUST00000037701_5end|description=CAGE_peak_5_at_AI661453_5end|id=chr17:47573550..47573557,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-14,6;CL:0000677,1.04e-14,6;CL:0000584,1.04e-14,6;CL:0000075,1.65e-12,7;CL:0000223,7.74e-11,20;CL:0000066,3.29e-10,25;CL:0002563,1.42e-09,9;CL:0002251,1.42e-09,9;CL:0000349,4.02e-09,3;CL:0000351,4.02e-09,3;CL:0000182,2.01e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.06e-14!130;UBERON:0000925!6.06e-14!130;UBERON:0006595!6.06e-14!130;UBERON:0001007!8.93e-13!128;UBERON:0001555!8.93e-13!128;UBERON:0007026!8.93e-13!128;UBERON:0004921!4.21e-12!126;UBERON:0004185!4.21e-12!126;UBERON:0000160!3.34e-10!43;UBERON:0005409!3.83e-10!59;UBERON:0000344!9.61e-08!15;UBERON:0001242!4.05e-07!13;UBERON:0000060!4.05e-07!13;UBERON:0001262!4.05e-07!13;UBERON:0004786!4.05e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000014,9.94e-13,5;UBERON:0001003,9.94e-13,5;UBERON:0002097,9.94e-13,5;UBERON:0002199,9.94e-13,5;UBERON:0007029,9.94e-13,5;UBERON:0007376,9.94e-13,5;UBERON:0002416,9.94e-13,5;UBERON:0007383,9.94e-13,5;UBERON:0000160,2.93e-12,31;UBERON:0001242,4.10e-11,13;UBERON:0001262,4.10e-11,13;UBERON:0004786,4.10e-11,13;UBERON:0004923,8.58e-11,24;UBERON:0003350,1.42e-09,9;UBERON:0004808,1.42e-09,9;UBERON:0001277,1.42e-09,9;UBERON:0000344,1.88e-09,15;UBERON:0005409,1.93e-09,47;UBERON:0000358,4.02e-09,3;UBERON:0000307,4.02e-09,3;UBERON:0007010,4.02e-09,3;UBERON:0005631,5.76e-09,3;UBERON:0000478,5.76e-09,3;UBERON:0000158,5.76e-09,3;UBERON:0000485,1.05e-07,11|phase1_expression=0,1.39590163055744,1.81999695755814,3.32710632437513,1.50268718983904,1.34303417529512,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.45881856213434,2.29692785646008,0.86152399231815,0.861884930743556,1.71021077510736,0.756090389279792,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,1.07940638327563,1.94932925234301,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.34255163915718,0,0.148442139064825,0,0,0,0,0.23517741427141,0,2.96633961281249,0,0,0,0,0,0,0,0,1.02182822083437,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0,0.232236671860439,0.644337306610467,1.21010114774006,0.667134131534611,0.760902504450237,1.42358718463353,0.494096864172033,0.251335208800269,1.39269530428806,1.36474860983384,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.350679099451593,0.379419222745544,0.442830443938806,0.470996183524124,0.246794327843601,0.889357881261447,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0.505157755894224,1.61457672169721,0.482443521363367,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.354680467284547,0,0,0,2.58138878870081,2.1183207086382,0.661585194164886,6.5954501176592,1.13025098687134,1.5078231232039,1.55184047204077,1.80554989719567,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0.419854356970974,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.836353184057875,0.218362563746178,0.269728692769641,1.07449492442937,0.785267825952089,1.03691978633434,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.314578033277133,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,0.680191150845634,3.10780334723691,2.15313255862742,4.02923079273788,0.772758376128762,0.187682475451182,0.915758121336325,1.50057865355346,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0,1.01078884705519,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0.824171801606613,0.441596760403192,0,0.887379030796687,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0.220591419119515,0|short_description=p5@AI661453}} | ||
|EntrezGene=224833 | |||
|HGNC= | |||
|UniProt=Q91Z58 | |||
|association_with_transcript=-6bp_to_ENSMUST00000037701_5end | |||
|description=CAGE_peak_5_at_AI661453_5end | |||
|id=chr17:47573550..47573557,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-14,6;CL:0000677,1.04e-14,6;CL:0000584,1.04e-14,6;CL:0000075,1.65e-12,7;CL:0000223,7.74e-11,20;CL:0000066,3.29e-10,25;CL:0002563,1.42e-09,9;CL:0002251,1.42e-09,9;CL:0000349,4.02e-09,3;CL:0000351,4.02e-09,3;CL:0000182,2.01e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.06e-14!130;UBERON:0000925!6.06e-14!130;UBERON:0006595!6.06e-14!130;UBERON:0001007!8.93e-13!128;UBERON:0001555!8.93e-13!128;UBERON:0007026!8.93e-13!128;UBERON:0004921!4.21e-12!126;UBERON:0004185!4.21e-12!126;UBERON:0000160!3.34e-10!43;UBERON:0005409!3.83e-10!59;UBERON:0000344!9.61e-08!15;UBERON:0001242!4.05e-07!13;UBERON:0000060!4.05e-07!13;UBERON:0001262!4.05e-07!13;UBERON:0004786!4.05e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,9.94e-13,5;UBERON:0001003,9.94e-13,5;UBERON:0002097,9.94e-13,5;UBERON:0002199,9.94e-13,5;UBERON:0007029,9.94e-13,5;UBERON:0007376,9.94e-13,5;UBERON:0002416,9.94e-13,5;UBERON:0007383,9.94e-13,5;UBERON:0000160,2.93e-12,31;UBERON:0001242,4.10e-11,13;UBERON:0001262,4.10e-11,13;UBERON:0004786,4.10e-11,13;UBERON:0004923,8.58e-11,24;UBERON:0003350,1.42e-09,9;UBERON:0004808,1.42e-09,9;UBERON:0001277,1.42e-09,9;UBERON:0000344,1.88e-09,15;UBERON:0005409,1.93e-09,47;UBERON:0000358,4.02e-09,3;UBERON:0000307,4.02e-09,3;UBERON:0007010,4.02e-09,3;UBERON:0005631,5.76e-09,3;UBERON:0000478,5.76e-09,3;UBERON:0000158,5.76e-09,3;UBERON:0000485,1.05e-07,11 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,3.32710632437513,1.50268718983904,1.34303417529512,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.45881856213434,2.29692785646008,0.86152399231815,0.861884930743556,1.71021077510736,0.756090389279792,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,1.07940638327563,1.94932925234301,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.34255163915718,0,0.148442139064825,0,0,0,0,0.23517741427141,0,2.96633961281249,0,0,0,0,0,0,0,0,1.02182822083437,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0,1.32167513193519,1.32225283331772,0,0.232236671860439,0.644337306610467,1.21010114774006,0.667134131534611,0.760902504450237,1.42358718463353,0.494096864172033,0.251335208800269,1.39269530428806,1.36474860983384,0,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.350679099451593,0.379419222745544,0.442830443938806,0.470996183524124,0.246794327843601,0.889357881261447,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0.505157755894224,1.61457672169721,0.482443521363367,0.739012760666419,0,0.162964976442026,0.339490171550376,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.354680467284547,0,0,0,2.58138878870081,2.1183207086382,0.661585194164886,6.5954501176592,1.13025098687134,1.5078231232039,1.55184047204077,1.80554989719567,0.874442509889552,0,0,0,0.185194527369712,0,0,0,0,0.419854356970974,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.836353184057875,0.218362563746178,0.269728692769641,1.07449492442937,0.785267825952089,1.03691978633434,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.314578033277133,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,0.680191150845634,3.10780334723691,2.15313255862742,4.02923079273788,0.772758376128762,0.187682475451182,0.915758121336325,1.50057865355346,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0.44449345560323,0.206035057238894,0,1.01078884705519,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0.192909220463705,0.824171801606613,0.441596760403192,0,0.887379030796687,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@AI661453 | |||
}} |
Revision as of 14:42, 13 September 2013
Short description: | p5@AI661453 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_AI661453_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENSMUST00000037701_5end |
EntrezGene: | AI661453 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.04e-14 | 6 |
gut absorptive cell | 1.04e-14 | 6 |
enterocyte | 1.04e-14 | 6 |
columnar/cuboidal epithelial cell | 1.65e-12 | 7 |
endodermal cell | 7.74e-11 | 20 |
epithelial cell | 3.29e-10 | 25 |
intestinal epithelial cell | 1.42e-09 | 9 |
epithelial cell of alimentary canal | 1.42e-09 | 9 |
extraembryonic cell | 4.02e-09 | 3 |
trophoblast cell | 4.02e-09 | 3 |
hepatocyte | 2.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 9.94e-13 | 5 |
skin epidermis | 9.94e-13 | 5 |
skin of body | 9.94e-13 | 5 |
integument | 9.94e-13 | 5 |
surface | 9.94e-13 | 5 |
outer epithelium | 9.94e-13 | 5 |
integumental system | 9.94e-13 | 5 |
enveloping layer of ectoderm | 9.94e-13 | 5 |
intestine | 2.93e-12 | 31 |
intestinal mucosa | 4.10e-11 | 13 |
wall of intestine | 4.10e-11 | 13 |
gastrointestinal system mucosa | 4.10e-11 | 13 |
organ component layer | 8.58e-11 | 24 |
epithelium of mucosa | 1.42e-09 | 9 |
gastrointestinal system epithelium | 1.42e-09 | 9 |
intestinal epithelium | 1.42e-09 | 9 |
mucosa | 1.88e-09 | 15 |
gastrointestinal system | 1.93e-09 | 47 |
blastocyst | 4.02e-09 | 3 |
blastula | 4.02e-09 | 3 |
cleaving embryo | 4.02e-09 | 3 |
extraembryonic membrane | 5.76e-09 | 3 |
extraembryonic structure | 5.76e-09 | 3 |
membranous layer | 5.76e-09 | 3 |
simple columnar epithelium | 1.05e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.