FFCP PHASE1:Mm9::chr17:85082430..85082444,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67470|HGNC=|MCL_coexpression_id=24|UniProt=Q9DBM0|association_with_transcript=-16bp_to_ENSMUST00000045714_5end|description=CAGE_peak_3_at_Abcg8_5end|id=chr17:85082430..85082444,+|ontology_enrichment_celltype=CL:0002563!6.86e-14!9;CL:0002251!6.86e-14!9;CL:0000066!7.31e-12!25;CL:0000239!6.67e-11!6;CL:0000677!6.67e-11!6;CL:0000212!6.67e-11!6;CL:0000584!6.67e-11!6;CL:0000223!2.08e-09!20;CL:0000075!3.43e-09!7;CL:0002076!1.59e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,7.27e-15,6;CL:0000677,7.27e-15,6;CL:0000584,7.27e-15,6;CL:0000075,1.25e-12,7;CL:0000066,1.33e-11,25;CL:0002563,1.20e-09,9;CL:0002251,1.20e-09,9;CL:0000682,2.20e-08,3;CL:0000223,3.66e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.11e-23!15;UBERON:0000160!6.98e-23!43;UBERON:0001242!3.01e-20!13;UBERON:0000060!3.01e-20!13;UBERON:0001262!3.01e-20!13;UBERON:0004786!3.01e-20!13;UBERON:0005409!8.70e-16!59;UBERON:0003350!6.86e-14!9;UBERON:0004808!6.86e-14!9;UBERON:0001277!6.86e-14!9;UBERON:0004923!6.56e-13!24;UBERON:0001007!6.94e-13!128;UBERON:0001555!6.94e-13!128;UBERON:0007026!6.94e-13!128;UBERON:0004119!1.62e-12!130;UBERON:0000925!1.62e-12!130;UBERON:0006595!1.62e-12!130;UBERON:0004921!2.53e-11!126;UBERON:0004185!2.53e-11!126;UBERON:0000485!5.48e-11!11;UBERON:0003929!1.64e-07!55;UBERON:0002107!1.70e-07!22;UBERON:0007499!1.70e-07!22;UBERON:0006925!1.70e-07!22;UBERON:0009497!1.70e-07!22;UBERON:0000015!1.70e-07!22;UBERON:0002423!1.70e-07!22;UBERON:0006235!1.70e-07!22;UBERON:0008835!1.70e-07!22;UBERON:0003894!1.70e-07!22;UBERON:0004161!1.70e-07!22;UBERON:0008836!1.70e-07!22;UBERON:0009854!4.68e-07!23;UBERON:0009856!4.68e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.78e-34,31;UBERON:0000344,6.56e-22,15;UBERON:0005409,1.49e-20,47;UBERON:0001242,7.29e-18,13;UBERON:0001262,7.29e-18,13;UBERON:0004786,7.29e-18,13;UBERON:0001007,1.72e-15,116;UBERON:0001555,1.72e-15,116;UBERON:0007026,1.72e-15,116;UBERON:0004119,4.18e-15,118;UBERON:0000925,4.18e-15,118;UBERON:0006595,4.18e-15,118;UBERON:0004921,2.20e-13,114;UBERON:0004923,1.19e-12,24;UBERON:0002108,2.08e-10,4;UBERON:0003350,1.20e-09,9;UBERON:0004808,1.20e-09,9;UBERON:0001277,1.20e-09,9;UBERON:0000331,3.42e-08,3;UBERON:0002116,3.42e-08,3;UBERON:0001204,3.42e-08,3;UBERON:0001168,3.42e-08,3;UBERON:0000485,9.49e-08,11|phase1_expression=0,19.5426228278042,15.9249733786338,27.5242432289215,22.5403078475856,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,3.67054849707472,12.6331032105304,8.18447792702242,3.878482188346,8.7410772949932,7.05684363327806,3.32595765982957,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.61910957491345,1.94932925234301,1.34408066129201,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,4.7601101999438,0,0,0,0,0.22237804384487,1.52180500890047,6.64340686162316,3.62337700392824,2.26201687920243,3.78017296878187,2.72949721966768,4.49409704327111,5.83572734661674,8.16479220342906,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0.324270453550071,0.823684239564244,0,1.11642284300551,1.5601883655728,2.27320990152401,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p3@Abcg8}} | ||
|EntrezGene=67470 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q9DBM0 | |||
|association_with_transcript=-16bp_to_ENSMUST00000045714_5end | |||
|description=CAGE_peak_3_at_Abcg8_5end | |||
|id=chr17:85082430..85082444,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.86e-14!9;CL:0002251!6.86e-14!9;CL:0000066!7.31e-12!25;CL:0000239!6.67e-11!6;CL:0000677!6.67e-11!6;CL:0000212!6.67e-11!6;CL:0000584!6.67e-11!6;CL:0000223!2.08e-09!20;CL:0000075!3.43e-09!7;CL:0002076!1.59e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.27e-15,6;CL:0000677,7.27e-15,6;CL:0000584,7.27e-15,6;CL:0000075,1.25e-12,7;CL:0000066,1.33e-11,25;CL:0002563,1.20e-09,9;CL:0002251,1.20e-09,9;CL:0000682,2.20e-08,3;CL:0000223,3.66e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.11e-23!15;UBERON:0000160!6.98e-23!43;UBERON:0001242!3.01e-20!13;UBERON:0000060!3.01e-20!13;UBERON:0001262!3.01e-20!13;UBERON:0004786!3.01e-20!13;UBERON:0005409!8.70e-16!59;UBERON:0003350!6.86e-14!9;UBERON:0004808!6.86e-14!9;UBERON:0001277!6.86e-14!9;UBERON:0004923!6.56e-13!24;UBERON:0001007!6.94e-13!128;UBERON:0001555!6.94e-13!128;UBERON:0007026!6.94e-13!128;UBERON:0004119!1.62e-12!130;UBERON:0000925!1.62e-12!130;UBERON:0006595!1.62e-12!130;UBERON:0004921!2.53e-11!126;UBERON:0004185!2.53e-11!126;UBERON:0000485!5.48e-11!11;UBERON:0003929!1.64e-07!55;UBERON:0002107!1.70e-07!22;UBERON:0007499!1.70e-07!22;UBERON:0006925!1.70e-07!22;UBERON:0009497!1.70e-07!22;UBERON:0000015!1.70e-07!22;UBERON:0002423!1.70e-07!22;UBERON:0006235!1.70e-07!22;UBERON:0008835!1.70e-07!22;UBERON:0003894!1.70e-07!22;UBERON:0004161!1.70e-07!22;UBERON:0008836!1.70e-07!22;UBERON:0009854!4.68e-07!23;UBERON:0009856!4.68e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.78e-34,31;UBERON:0000344,6.56e-22,15;UBERON:0005409,1.49e-20,47;UBERON:0001242,7.29e-18,13;UBERON:0001262,7.29e-18,13;UBERON:0004786,7.29e-18,13;UBERON:0001007,1.72e-15,116;UBERON:0001555,1.72e-15,116;UBERON:0007026,1.72e-15,116;UBERON:0004119,4.18e-15,118;UBERON:0000925,4.18e-15,118;UBERON:0006595,4.18e-15,118;UBERON:0004921,2.20e-13,114;UBERON:0004923,1.19e-12,24;UBERON:0002108,2.08e-10,4;UBERON:0003350,1.20e-09,9;UBERON:0004808,1.20e-09,9;UBERON:0001277,1.20e-09,9;UBERON:0000331,3.42e-08,3;UBERON:0002116,3.42e-08,3;UBERON:0001204,3.42e-08,3;UBERON:0001168,3.42e-08,3;UBERON:0000485,9.49e-08,11 | |||
|phase1_expression=0,19.5426228278042,15.9249733786338,27.5242432289215,22.5403078475856,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15980299262857,3.67054849707472,12.6331032105304,8.18447792702242,3.878482188346,8.7410772949932,7.05684363327806,3.32595765982957,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.61910957491345,1.94932925234301,1.34408066129201,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,4.7601101999438,0,0,0,0,0.22237804384487,1.52180500890047,6.64340686162316,3.62337700392824,2.26201687920243,3.78017296878187,2.72949721966768,4.49409704327111,5.83572734661674,8.16479220342906,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0,0,0,0,0,0.324270453550071,0.823684239564244,0,1.11642284300551,1.5601883655728,2.27320990152401,1.4351793081753,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@Abcg8 | |||
}} |
Revision as of 15:30, 13 September 2013
Short description: | p3@Abcg8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Abcg8_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -16bp_to_ENSMUST00000045714_5end |
EntrezGene: | Abcg8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.27e-15 | 6 |
gut absorptive cell | 7.27e-15 | 6 |
enterocyte | 7.27e-15 | 6 |
columnar/cuboidal epithelial cell | 1.25e-12 | 7 |
epithelial cell | 1.33e-11 | 25 |
intestinal epithelial cell | 1.20e-09 | 9 |
epithelial cell of alimentary canal | 1.20e-09 | 9 |
M cell of gut | 2.20e-08 | 3 |
endodermal cell | 3.66e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.78e-34 | 31 |
mucosa | 6.56e-22 | 15 |
gastrointestinal system | 1.49e-20 | 47 |
intestinal mucosa | 7.29e-18 | 13 |
wall of intestine | 7.29e-18 | 13 |
gastrointestinal system mucosa | 7.29e-18 | 13 |
digestive system | 1.72e-15 | 116 |
digestive tract | 1.72e-15 | 116 |
primitive gut | 1.72e-15 | 116 |
endoderm-derived structure | 4.18e-15 | 118 |
endoderm | 4.18e-15 | 118 |
presumptive endoderm | 4.18e-15 | 118 |
subdivision of digestive tract | 2.20e-13 | 114 |
organ component layer | 1.19e-12 | 24 |
small intestine | 2.08e-10 | 4 |
epithelium of mucosa | 1.20e-09 | 9 |
gastrointestinal system epithelium | 1.20e-09 | 9 |
intestinal epithelium | 1.20e-09 | 9 |
ileal mucosa | 3.42e-08 | 3 |
ileum | 3.42e-08 | 3 |
mucosa of small intestine | 3.42e-08 | 3 |
wall of small intestine | 3.42e-08 | 3 |
simple columnar epithelium | 9.49e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.