FFCP PHASE1:Mm9::chr18:11051543..11051554,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=1711|UniProt=|association_with_transcript=-56bp_to_ENSMUST00000138373_5end|description=CAGE_peak_5_at_ENSMUST00000138373_5end|id=chr18:11051543..11051554,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.72e-15!23;UBERON:0001009!1.72e-15!23;UBERON:0007100!2.01e-13!18;UBERON:0000948!2.01e-13!18;UBERON:0005498!2.01e-13!18;UBERON:0004140!2.01e-13!18;UBERON:0009881!2.01e-13!18;UBERON:0004141!2.01e-13!18;UBERON:0003084!2.01e-13!18;UBERON:0007005!2.01e-13!18;UBERON:0004139!2.01e-13!18;UBERON:0004291!2.01e-13!18;UBERON:0004872!7.36e-11!33;UBERON:0005409!9.22e-11!59;UBERON:0000160!1.81e-10!43;UBERON:0003914!1.01e-09!47;UBERON:0001007!2.48e-07!128;UBERON:0001555!2.48e-07!128;UBERON:0007026!2.48e-07!128;UBERON:0004921!2.61e-07!126;UBERON:0004185!2.61e-07!126;UBERON:0004119!2.86e-07!130;UBERON:0000925!2.86e-07!130;UBERON:0006595!2.86e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.43e-21,18;UBERON:0000948,1.43e-21,18;UBERON:0005498,1.43e-21,18;UBERON:0004140,1.43e-21,18;UBERON:0009881,1.43e-21,18;UBERON:0004141,1.43e-21,18;UBERON:0003084,1.43e-21,18;UBERON:0007005,1.43e-21,18;UBERON:0004139,1.43e-21,18;UBERON:0004291,1.43e-21,18;UBERON:0004535,1.88e-16,23;UBERON:0001009,1.88e-16,23;UBERON:0000160,1.98e-11,31;UBERON:0004872,7.31e-11,33;UBERON:0003103,7.06e-08,43;UBERON:0003914,4.85e-07,47;UBERON:0005409,7.03e-07,47|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,0,0.430761996159075,0.430942465371778,0.570070258369122,0.756090389279792,0.221730510655305,0,0,0,3.46621943701529,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0.304465478312141,0,0,0.705532242814229,0.502666365318702,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,6.94458124425364,0,0,0,0,0,0,0.0937017245597288,2.84573707812917,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,1.24275463521301,1.64168241986767,2.16074473753218,1.65721314909647,0.983821158737019,2.00547246753592,2.32533944750408,1.60964040839772,1.40118410840603,2.63295759861569,0.985004784474571,1.05389452409612,0.877199924551994,0.658650345873152,1.07365135008297,0,0,0.660837565967596,0.793351699990633,0.426576501070468,0.232236671860439,1.15980715189884,1.61346819698674,1.33426826306922,2.09248188723815,0.474529061544512,1.97638745668813,0.251335208800269,0.994782360205754,1.16978452271472,0,1.08069024937347,1.59313018603494,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0.837531287209079,0.714130922658041,0.195133647857799,0,0.44292937929755,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.712262414669021,0.81443479676788,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,1.45740418314925,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.58678619322877,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p5@ENSMUST00000138373}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=1711 | |||
|UniProt= | |||
|association_with_transcript=-56bp_to_ENSMUST00000138373_5end | |||
|description=CAGE_peak_5_at_ENSMUST00000138373_5end | |||
|id=chr18:11051543..11051554,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.72e-15!23;UBERON:0001009!1.72e-15!23;UBERON:0007100!2.01e-13!18;UBERON:0000948!2.01e-13!18;UBERON:0005498!2.01e-13!18;UBERON:0004140!2.01e-13!18;UBERON:0009881!2.01e-13!18;UBERON:0004141!2.01e-13!18;UBERON:0003084!2.01e-13!18;UBERON:0007005!2.01e-13!18;UBERON:0004139!2.01e-13!18;UBERON:0004291!2.01e-13!18;UBERON:0004872!7.36e-11!33;UBERON:0005409!9.22e-11!59;UBERON:0000160!1.81e-10!43;UBERON:0003914!1.01e-09!47;UBERON:0001007!2.48e-07!128;UBERON:0001555!2.48e-07!128;UBERON:0007026!2.48e-07!128;UBERON:0004921!2.61e-07!126;UBERON:0004185!2.61e-07!126;UBERON:0004119!2.86e-07!130;UBERON:0000925!2.86e-07!130;UBERON:0006595!2.86e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.43e-21,18;UBERON:0000948,1.43e-21,18;UBERON:0005498,1.43e-21,18;UBERON:0004140,1.43e-21,18;UBERON:0009881,1.43e-21,18;UBERON:0004141,1.43e-21,18;UBERON:0003084,1.43e-21,18;UBERON:0007005,1.43e-21,18;UBERON:0004139,1.43e-21,18;UBERON:0004291,1.43e-21,18;UBERON:0004535,1.88e-16,23;UBERON:0001009,1.88e-16,23;UBERON:0000160,1.98e-11,31;UBERON:0004872,7.31e-11,33;UBERON:0003103,7.06e-08,43;UBERON:0003914,4.85e-07,47;UBERON:0005409,7.03e-07,47 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,0,0.430761996159075,0.430942465371778,0.570070258369122,0.756090389279792,0.221730510655305,0,0,0,3.46621943701529,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.173485326766136,0.304465478312141,0,0,0.705532242814229,0.502666365318702,0.247194967734374,0.578397427679647,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,6.94458124425364,0,0,0,0,0,0,0.0937017245597288,2.84573707812917,0,0,0,0.219195732427575,0,0,0.205782136407943,0.59710280045548,0,0,0,1.24275463521301,1.64168241986767,2.16074473753218,1.65721314909647,0.983821158737019,2.00547246753592,2.32533944750408,1.60964040839772,1.40118410840603,2.63295759861569,0.985004784474571,1.05389452409612,0.877199924551994,0.658650345873152,1.07365135008297,0,0,0.660837565967596,0.793351699990633,0.426576501070468,0.232236671860439,1.15980715189884,1.61346819698674,1.33426826306922,2.09248188723815,0.474529061544512,1.97638745668813,0.251335208800269,0.994782360205754,1.16978452271472,0,1.08069024937347,1.59313018603494,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0.482443521363367,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0.837531287209079,0.714130922658041,0.195133647857799,0,0.44292937929755,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.712262414669021,0.81443479676788,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,1.45740418314925,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0.785267825952089,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.58678619322877,0.2604087696879,0.209718688851422,0,0.288030006257865,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0,0.561142271657738,0,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p5@ENSMUST00000138373 | |||
}} |
Revision as of 15:41, 13 September 2013
Short description: | p5@ENSMUST00000138373 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ENSMUST00000138373_5end |
Coexpression cluster: | MCL_coexpression_mm9:1711 |
Association with transcript: | -56bp_to_ENSMUST00000138373_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.43e-21 | 18 |
heart | 1.43e-21 | 18 |
primitive heart tube | 1.43e-21 | 18 |
primary heart field | 1.43e-21 | 18 |
anterior lateral plate mesoderm | 1.43e-21 | 18 |
heart tube | 1.43e-21 | 18 |
heart primordium | 1.43e-21 | 18 |
cardiac mesoderm | 1.43e-21 | 18 |
cardiogenic plate | 1.43e-21 | 18 |
heart rudiment | 1.43e-21 | 18 |
cardiovascular system | 1.88e-16 | 23 |
circulatory system | 1.88e-16 | 23 |
intestine | 1.98e-11 | 31 |
splanchnic layer of lateral plate mesoderm | 7.31e-11 | 33 |
compound organ | 7.06e-08 | 43 |
epithelial tube | 4.85e-07 | 47 |
gastrointestinal system | 7.03e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.