FFCP PHASE1:Mm9::chr18:63851995..63852028,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=53382|HGNC=|UniProt=Q8CDN6,Q3UNH3|association_with_transcript=0bp_to_ENSMUST00000025476,NM_016792,uc008fdx.1,uc008fdy.1_5end|description=CAGE_peak_2_at_Txnl1_5end|id=chr18:63851995..63852028,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.68e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.68e-07,47|phase1_expression=29.9478344085965,32.1057375028212,41.8599300238373,24.1971369045464,21.5385163876929,33.7437336542898,31.3040938398004,28.2780078337052,45.0523910885334,36.982195158875,54.2760959274851,55.2023340247728,18.318478102639,22.8167250313583,46.3022568923771,42.3173308844736,35.6776557845355,18.1390745080987,17.2764186343231,27.1609377150739,28.2343723301552,42.1986542603763,39.7023679491182,35.9982951285165,37.3937128139487,41.3447014162815,44.7992476005438,40.724062977633,34.58426234106,41.5849714103886,49.2241733654776,34.2916563668201,34.4436281047359,15.8481681015439,58.0591755700062,70.4834896320008,58.8007746035623,23.0192396905299,27.346737058333,35.0760908462445,23.5292595212406,32.1031377930469,32.0436833000561,37.1395613027953,40.2466416941473,42.5828465015101,32.0780451182696,35.1020501772519,43.7175503641599,36.1639612278167,43.8157499687385,37.3756667348926,20.3016953329861,18.859415692295,25.5431287348273,67.4019722414181,53.5817532685475,40.7380952899179,33.7868489635528,33.8554226734101,38.0298842103708,45.7440118293328,33.7932022522233,25.6471419425199,17.7995945262055,26.9982443679518,26.664409836138,18.4424786554346,37.7430188802859,38.4766924245318,41.2236924248709,36.2776750192831,31.3633328151291,37.1147121621311,39.4883340595134,37.6879702510109,55.0579404996944,43.4136949489638,50.6901559745603,32.7077993570881,34.2163787073012,41.152156273984,46.0651948352279,43.3327209724394,45.075483094159,44.1942878210502,37.301380369365,38.2118863941866,57.2490021598871,45.4940791842849,34.204009666798,42.1607699720879,72.0769613730216,51.2718032055926,53.2816662307089,46.5947962581229,46.7679919038734,48.7430722573245,58.9714230448512,45.5808051118339,28.1686839553361,23.0987659345772,38.2207859559969,21.3320010945999,81.4006314202165,83.6087556067825,64.2016045168775,50.1267231966673,38.5817446634286,40.5247039646972,45.1061849591953,48.1055455733183,42.8944824896269,45.2167921657868,47.7410150970962,46.3709722006503,145.103446060077,33.4024514484996,19.4614321428972,46.5888527848538,38.6472657305689,44.1236480353052,20.5030937339934,31.6203260772471,29.5319856606972,42.1504141094176,43.3730750711431,31.1949420116572,42.3143856153305,46.7346794943047,37.0575488283087,36.9423795211821,47.1063907721069,39.8916113435316,43.4277013129481,44.2918648174978,37.3750465330661,36.2024284475371,36.6447999728828,45.4554408714784,52.5686589569323,42.9916935290594,47.8965265282229,41.5945297226574,35.9232715519011,37.4092063231761,38.2303036203694,38.0293954986353,47.6405264381581,44.2508227592697,39.4130518127245,47.1270824719286,45.0436543745469,34.4769644856945,44.8605057369317,45.180778567798,25.2796747432765,35.7713590889454,33.8154564280755,49.917311181056,58.396988935293,49.5170669017791,44.2712655544343,53.7166352670412,49.365476123961,43.2513137235759,46.6795718435337,44.3708300995244,38.8361245795814,43.5043779809602,53.1000702525355,50.0003956994637,59.4980812438747,48.5827235912546,47.946108272621,41.1618449517138,54.8495179753105,57.6502235326527,58.4409806466541,45.7506243565064,38.1447685513396,32.6727309889815,36.025243102869,34.8112895785983,46.0293189698176,36.2337700392824,30.6628954736329,38.199642631901,32.1690743746548,36.8515957548231,40.6339533764425,39.8282546508734,50.4516616535197,49.1268604221834,43.9560169125014,42.766778847516,42.8634996640453,35.7692681440625,41.6096414277613,37.3453674388393,47.8846119916193,36.1553690290876,44.7643466901595,46.2160942833581,57.7883445632817,39.3508696673494,54.1636524107303,45.5824831932068,44.0502723581856,36.8251055937038,47.0192157647603,59.0307038354375,41.6927798929328,59.914692574629,56.4788188337355,68.7014548016144,66.7358378301513,67.059649469508,36.3963784628211,50.2152241191785,41.2301390398326,50.2445453894557,51.1624741268935,34.1712765181304,32.3739351604979,26.147908812945,39.8816914588663,34.9914209645064,38.5880540151119,29.1676700194014,32.6374615726543,30.5209513606989,21.1107797514981,40.7929262864032,45.2423131177513,44.7017529013667,40.7798498568992,44.6576525916294,59.6723201171099,49.9892435864659,43.5401342794434,43.7291393612235,41.1458689669646,46.3599468027951,38.7669692903366,38.2153316564924,39.6714487641396,42.3770993971402,47.4345333535828,29.5615611108062,53.9372323791421,34.7227927151148,36.486678895201,31.1793532418092,43.8058956521877,48.0705659586863,56.2321815954437,64.3143321967613,44.2952839321159,41.5037449724302,42.3822400795883,39.6251765130481,40.6407011358582,54.990395880832,59.0344208019993,74.2575911386945,37.4483566329167,48.2563732003911,39.5837572375229,33.2222404298968,36.7094283639506,35.31702588521,43.4409414389599,27.0973804711993,61.7186592207558,87.2748131958939,80.7133936881161,43.6948570294922,42.9495375011109,50.0597276903694,49.1814057292922,60.5679920059276,40.2243554549194,52.4753604689742,47.502104861803,37.9751837052329,50.5581059719313,44.4549558531071,52.6272776725947,46.2131909877176,42.1546506384761,38.9065037459769,34.5499934511059,60.1442489349522,50.7719269697722,30.0912811347736,43.7421630328295,39.7267762427491,40.8337994205352,39.9198465299069,39.9216191153373,44.236754195301,36.292192521702,44.1150912291717,21.4203316699992,51.1346587470407,47.1556697802728,54.6407839246774,42.1061024537403,47.8145835138902,47.2949671742388,41.4049943803761,53.2685469682611,32.6138563115108,19.8740704317927,40.765434561035,46.0186238708673,49.0958375247874,53.9171415357849,44.9357006125378,34.5705557319401,39.4241074425498,40.3192409186596,37.0546871309702,37.1889216476399,45.1701309413045,38.7882365344215,31.7499077413087,21.972857610135,52.8281793823442,82.356788701778,92.8538415908073,78.0663466092965,33.4217997675689,43.1669693537719,38.4618410961257,40.3012552668644,48.1509219873949,47.4391547798336,46.0325236507177,44.6858500482729,51.0403951560752,31.5137959094495,34.7481192799262,39.1513050134447,37.3766598676103,50.7519498062309,41.9385852518974,79.0859588591426,45.0898106943165,42.6834014385335,38.6539680138588,51.5648380064836,45.9608771125035,36.6707100872665,38.1164855891954,38.189385941426,40.9369483057352,33.9662261852921,35.8390048633545,38.205735047712,37.7748399188729,35.4376843456134,32.8642646985321,35.3447194131809,34.1449320220758,25.1372399490017,35.6221386725242,30.515363462302,40.1095321920103,38.1497903915714,38.8074932408317,31.6207518195511,40.4457825722214,35.8538826830634,41.3019446957413,34.6300490306947,37.5965322010685,39.50546103535,39.2047839854743,26.1907867628601,36.565094519888,35.1090031985677,31.2263222422432,31.1129039232393,29.6522054586652,34.240611440323,38.8240897650347,40.8087390691942|short_description=p2@Txnl1}} | ||
|EntrezGene=53382 | |||
|HGNC= | |||
|UniProt=Q8CDN6,Q3UNH3 | |||
|association_with_transcript=0bp_to_ENSMUST00000025476,NM_016792,uc008fdx.1,uc008fdy.1_5end | |||
|description=CAGE_peak_2_at_Txnl1_5end | |||
|id=chr18:63851995..63852028,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.68e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.68e-07,47 | |||
|phase1_expression=29.9478344085965,32.1057375028212,41.8599300238373,24.1971369045464,21.5385163876929,33.7437336542898,31.3040938398004,28.2780078337052,45.0523910885334,36.982195158875,54.2760959274851,55.2023340247728,18.318478102639,22.8167250313583,46.3022568923771,42.3173308844736,35.6776557845355,18.1390745080987,17.2764186343231,27.1609377150739,28.2343723301552,42.1986542603763,39.7023679491182,35.9982951285165,37.3937128139487,41.3447014162815,44.7992476005438,40.724062977633,34.58426234106,41.5849714103886,49.2241733654776,34.2916563668201,34.4436281047359,15.8481681015439,58.0591755700062,70.4834896320008,58.8007746035623,23.0192396905299,27.346737058333,35.0760908462445,23.5292595212406,32.1031377930469,32.0436833000561,37.1395613027953,40.2466416941473,42.5828465015101,32.0780451182696,35.1020501772519,43.7175503641599,36.1639612278167,43.8157499687385,37.3756667348926,20.3016953329861,18.859415692295,25.5431287348273,67.4019722414181,53.5817532685475,40.7380952899179,33.7868489635528,33.8554226734101,38.0298842103708,45.7440118293328,33.7932022522233,25.6471419425199,17.7995945262055,26.9982443679518,26.664409836138,18.4424786554346,37.7430188802859,38.4766924245318,41.2236924248709,36.2776750192831,31.3633328151291,37.1147121621311,39.4883340595134,37.6879702510109,55.0579404996944,43.4136949489638,50.6901559745603,32.7077993570881,34.2163787073012,41.152156273984,46.0651948352279,43.3327209724394,45.075483094159,44.1942878210502,37.301380369365,38.2118863941866,57.2490021598871,45.4940791842849,34.204009666798,42.1607699720879,72.0769613730216,51.2718032055926,53.2816662307089,46.5947962581229,46.7679919038734,48.7430722573245,58.9714230448512,45.5808051118339,28.1686839553361,23.0987659345772,38.2207859559969,21.3320010945999,81.4006314202165,83.6087556067825,64.2016045168775,50.1267231966673,38.5817446634286,40.5247039646972,45.1061849591953,48.1055455733183,42.8944824896269,45.2167921657868,47.7410150970962,46.3709722006503,145.103446060077,33.4024514484996,19.4614321428972,46.5888527848538,38.6472657305689,44.1236480353052,20.5030937339934,31.6203260772471,29.5319856606972,42.1504141094176,43.3730750711431,31.1949420116572,42.3143856153305,46.7346794943047,37.0575488283087,36.9423795211821,47.1063907721069,39.8916113435316,43.4277013129481,44.2918648174978,37.3750465330661,36.2024284475371,36.6447999728828,45.4554408714784,52.5686589569323,42.9916935290594,47.8965265282229,41.5945297226574,35.9232715519011,37.4092063231761,38.2303036203694,38.0293954986353,47.6405264381581,44.2508227592697,39.4130518127245,47.1270824719286,45.0436543745469,34.4769644856945,44.8605057369317,45.180778567798,25.2796747432765,35.7713590889454,33.8154564280755,49.917311181056,58.396988935293,49.5170669017791,44.2712655544343,53.7166352670412,49.365476123961,43.2513137235759,46.6795718435337,44.3708300995244,38.8361245795814,43.5043779809602,53.1000702525355,50.0003956994637,59.4980812438747,48.5827235912546,47.946108272621,41.1618449517138,54.8495179753105,57.6502235326527,58.4409806466541,45.7506243565064,38.1447685513396,32.6727309889815,36.025243102869,34.8112895785983,46.0293189698176,36.2337700392824,30.6628954736329,38.199642631901,32.1690743746548,36.8515957548231,40.6339533764425,39.8282546508734,50.4516616535197,49.1268604221834,43.9560169125014,42.766778847516,42.8634996640453,35.7692681440625,41.6096414277613,37.3453674388393,47.8846119916193,36.1553690290876,44.7643466901595,46.2160942833581,57.7883445632817,39.3508696673494,54.1636524107303,45.5824831932068,44.0502723581856,36.8251055937038,47.0192157647603,59.0307038354375,41.6927798929328,59.914692574629,56.4788188337355,68.7014548016144,66.7358378301513,67.059649469508,36.3963784628211,50.2152241191785,41.2301390398326,50.2445453894557,51.1624741268935,34.1712765181304,32.3739351604979,26.147908812945,39.8816914588663,34.9914209645064,38.5880540151119,29.1676700194014,32.6374615726543,30.5209513606989,21.1107797514981,40.7929262864032,45.2423131177513,44.7017529013667,40.7798498568992,44.6576525916294,59.6723201171099,49.9892435864659,43.5401342794434,43.7291393612235,41.1458689669646,46.3599468027951,38.7669692903366,38.2153316564924,39.6714487641396,42.3770993971402,47.4345333535828,29.5615611108062,53.9372323791421,34.7227927151148,36.486678895201,31.1793532418092,43.8058956521877,48.0705659586863,56.2321815954437,64.3143321967613,44.2952839321159,41.5037449724302,42.3822400795883,39.6251765130481,40.6407011358582,54.990395880832,59.0344208019993,74.2575911386945,37.4483566329167,48.2563732003911,39.5837572375229,33.2222404298968,36.7094283639506,35.31702588521,43.4409414389599,27.0973804711993,61.7186592207558,87.2748131958939,80.7133936881161,43.6948570294922,42.9495375011109,50.0597276903694,49.1814057292922,60.5679920059276,40.2243554549194,52.4753604689742,47.502104861803,37.9751837052329,50.5581059719313,44.4549558531071,52.6272776725947,46.2131909877176,42.1546506384761,38.9065037459769,34.5499934511059,60.1442489349522,50.7719269697722,30.0912811347736,43.7421630328295,39.7267762427491,40.8337994205352,39.9198465299069,39.9216191153373,44.236754195301,36.292192521702,44.1150912291717,21.4203316699992,51.1346587470407,47.1556697802728,54.6407839246774,42.1061024537403,47.8145835138902,47.2949671742388,41.4049943803761,53.2685469682611,32.6138563115108,19.8740704317927,40.765434561035,46.0186238708673,49.0958375247874,53.9171415357849,44.9357006125378,34.5705557319401,39.4241074425498,40.3192409186596,37.0546871309702,37.1889216476399,45.1701309413045,38.7882365344215,31.7499077413087,21.972857610135,52.8281793823442,82.356788701778,92.8538415908073,78.0663466092965,33.4217997675689,43.1669693537719,38.4618410961257,40.3012552668644,48.1509219873949,47.4391547798336,46.0325236507177,44.6858500482729,51.0403951560752,31.5137959094495,34.7481192799262,39.1513050134447,37.3766598676103,50.7519498062309,41.9385852518974,79.0859588591426,45.0898106943165,42.6834014385335,38.6539680138588,51.5648380064836,45.9608771125035,36.6707100872665,38.1164855891954,38.189385941426,40.9369483057352,33.9662261852921,35.8390048633545,38.205735047712,37.7748399188729,35.4376843456134,32.8642646985321,35.3447194131809,34.1449320220758,25.1372399490017,35.6221386725242,30.515363462302,40.1095321920103,38.1497903915714,38.8074932408317,31.6207518195511,40.4457825722214,35.8538826830634,41.3019446957413,34.6300490306947,37.5965322010685,39.50546103535,39.2047839854743,26.1907867628601,36.565094519888,35.1090031985677,31.2263222422432,31.1129039232393,29.6522054586652,34.240611440323,38.8240897650347,40.8087390691942 | |||
|short_description=p2@Txnl1 | |||
}} | |||
Revision as of 16:32, 13 September 2013
| Short description: | p2@Txnl1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Txnl1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000025476, NM_016792, uc008fdx.1, uc008fdy.1_5end |
| EntrezGene: | Txnl1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 5.68e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
