FFCP PHASE1:Hg19::chr5:89143573..89143607,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C323|description=CAGE_peak_at_chr5:89143573..89143607,-|id=chr5:89143573..89143607,-|ontology_enrichment_celltype=CL:0000349!5.01e-55!3;CL:0002577!5.01e-55!3;CL:0002536!2.73e-37!2|ontology_enrichment_celltype_v019=CL:0002577;2.17e-98;3!CL:0002536;2.03e-66;2!CL:0000349;1.44e-43;19|ontology_enrichment_celltype_v019_2=CL:0002577,1.55e-98,3;CL:0002536,2.84e-66,2;CL:0000349,1.44e-43,19|ontology_enrichment_development_v019=UBERON:0007297;9.07e-18;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001987!1.67e-41!4;UBERON:0004340!1.67e-41!4;UBERON:0005631!1.47e-32!14;UBERON:0000158!1.47e-32!14;UBERON:0003124!4.48e-24!7;UBERON:0001301!1.56e-19!1;UBERON:0000478!4.33e-19!24;UBERON:0004175!4.94e-12!25;UBERON:0000305!2.07e-11!7;UBERON:0004871!4.22e-10!8;UBERON:0000995!1.85e-08!21;UBERON:0005795!4.23e-08!22;UBERON:0003975!4.23e-08!22;UBERON:0004923!4.38e-08!57;UBERON:0006947!2.19e-07!3;UBERON:0004054!2.19e-07!3|ontology_enrichment_uberon_v019=UBERON:0001987;4.26e-74;4!UBERON:0000478;1.20e-34;24!UBERON:0001301;5.05e-34;1!UBERON:0000305;7.13e-20;7!UBERON:0005631;3.04e-14;10!UBERON:0000158;3.04e-14;10!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0000077;9.28e-12;27!UBERON:0005904;1.44e-09;4!UBERON:0000474;3.65e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.32e-74,4;UBERON:0004340,3.32e-74,4;UBERON:0005631,7.71e-59,14;UBERON:0000158,7.71e-59,14;UBERON:0003124,6.96e-43,7;UBERON:0000478,1.20e-34,24;UBERON:0001301,5.05e-34,1;UBERON:0004175,1.21e-21,25;UBERON:0000305,7.84e-20,7;UBERON:0004871,1.71e-17,8;UBERON:0000995,6.53e-15,21;UBERON:0005795,2.85e-14,22;UBERON:0003975,2.85e-14,22;UBERON:0004923,5.70e-13,66;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0006554,8.15e-12,47;UBERON:0003133,1.40e-11,48;UBERON:0001008,1.40e-11,48;UBERON:0000077,5.14e-11,29;UBERON:0005904,1.44e-09,4;UBERON:0005156,1.59e-09,59;UBERON:0000990,1.59e-09,59;UBERON:0003134,8.61e-09,37;UBERON:0000474,8.61e-09,37;UBERON:0003100,5.32e-08,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,8.51921351307672,4.22027165165526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,3.94065842880137,4.99306318531491,15.7242952531434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54289337429278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:89143573..89143607,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr5:89143573..89143607,- | |||
|id=chr5:89143573..89143607,- | |||
|ontology_enrichment_celltype=CL:0000349!5.01e-55!3;CL:0002577!5.01e-55!3;CL:0002536!2.73e-37!2 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.17e-98;3!CL:0002536;2.03e-66;2!CL:0000349;1.44e-43;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.55e-98,3;CL:0002536,2.84e-66,2;CL:0000349,1.44e-43,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.07e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!1.67e-41!4;UBERON:0004340!1.67e-41!4;UBERON:0005631!1.47e-32!14;UBERON:0000158!1.47e-32!14;UBERON:0003124!4.48e-24!7;UBERON:0001301!1.56e-19!1;UBERON:0000478!4.33e-19!24;UBERON:0004175!4.94e-12!25;UBERON:0000305!2.07e-11!7;UBERON:0004871!4.22e-10!8;UBERON:0000995!1.85e-08!21;UBERON:0005795!4.23e-08!22;UBERON:0003975!4.23e-08!22;UBERON:0004923!4.38e-08!57;UBERON:0006947!2.19e-07!3;UBERON:0004054!2.19e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;4.26e-74;4!UBERON:0000478;1.20e-34;24!UBERON:0001301;5.05e-34;1!UBERON:0000305;7.13e-20;7!UBERON:0005631;3.04e-14;10!UBERON:0000158;3.04e-14;10!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0000077;9.28e-12;27!UBERON:0005904;1.44e-09;4!UBERON:0000474;3.65e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.32e-74,4;UBERON:0004340,3.32e-74,4;UBERON:0005631,7.71e-59,14;UBERON:0000158,7.71e-59,14;UBERON:0003124,6.96e-43,7;UBERON:0000478,1.20e-34,24;UBERON:0001301,5.05e-34,1;UBERON:0004175,1.21e-21,25;UBERON:0000305,7.84e-20,7;UBERON:0004871,1.71e-17,8;UBERON:0000995,6.53e-15,21;UBERON:0005795,2.85e-14,22;UBERON:0003975,2.85e-14,22;UBERON:0004923,5.70e-13,66;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0006554,8.15e-12,47;UBERON:0003133,1.40e-11,48;UBERON:0001008,1.40e-11,48;UBERON:0000077,5.14e-11,29;UBERON:0005904,1.44e-09,4;UBERON:0005156,1.59e-09,59;UBERON:0000990,1.59e-09,59;UBERON:0003134,8.61e-09,37;UBERON:0000474,8.61e-09,37;UBERON:0003100,5.32e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,8.51921351307672,4.22027165165526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,3.94065842880137,4.99306318531491,15.7242952531434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54289337429278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:89143573..89143607,- | |||
}} |
Revision as of 16:50, 13 September 2013
Short description: | p@chr5:89143573..89143607, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:89143573..89143607, - |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.55e-98 | 3 |
amniotic epithelial cell | 2.84e-66 | 2 |
extraembryonic cell | 1.44e-43 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 3.32e-74 | 4 |
allantois | 3.32e-74 | 4 |
extraembryonic membrane | 7.71e-59 | 14 |
membranous layer | 7.71e-59 | 14 |
chorion | 6.96e-43 | 7 |
extraembryonic structure | 1.20e-34 | 24 |
epididymis | 5.05e-34 | 1 |
internal genitalia | 1.21e-21 | 25 |
amnion | 7.84e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.71e-17 | 8 |
uterus | 6.53e-15 | 21 |
embryonic uterus | 2.85e-14 | 22 |
internal female genitalia | 2.85e-14 | 22 |
organ component layer | 5.70e-13 | 66 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
urinary system structure | 8.15e-12 | 47 |
reproductive organ | 1.40e-11 | 48 |
renal system | 1.40e-11 | 48 |
mixed endoderm/mesoderm-derived structure | 5.14e-11 | 29 |
duct of male reproductive system | 1.44e-09 | 4 |
reproductive structure | 1.59e-09 | 59 |
reproductive system | 1.59e-09 | 59 |
female reproductive organ | 8.61e-09 | 37 |
female reproductive system | 8.61e-09 | 37 |
female organism | 5.32e-08 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.