FFCP PHASE1:Hg19::chr5:95309942..95309984,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1120|description=CAGE_peak_at_chr5:95309942..95309984,+|id=chr5:95309942..95309984,+|ontology_enrichment_celltype=CL:0000988!9.81e-19!182;CL:0002031!1.55e-17!124;CL:0002032!8.46e-17!165;CL:0000837!8.46e-17!165;CL:0000037!7.74e-16!172;CL:0000566!7.74e-16!172;CL:0000738!7.52e-15!140;CL:0002274!1.02e-13!5;CL:0000457!1.02e-13!5;CL:0002191!1.02e-13!5;CL:0000097!1.02e-13!5;CL:0000831!1.02e-13!5;CL:0002028!1.02e-13!5;CL:0002057!1.14e-12!42;CL:0002087!1.47e-12!119;CL:0000839!4.62e-12!70;CL:0000557!7.63e-12!71;CL:0000860!1.18e-11!45;CL:0000163!1.46e-11!9;CL:0000766!7.66e-11!76;CL:0000763!1.03e-10!112;CL:0000049!1.03e-10!112;CL:0000080!1.80e-07!6;CL:0002194!1.83e-07!63;CL:0000576!1.83e-07!63;CL:0000040!1.83e-07!63;CL:0000559!1.83e-07!63;CL:0002009!3.64e-07!65|ontology_enrichment_celltype_v019=CL:0002127;1.84e-14;1!CL:0000911;1.84e-14;1!CL:0000814;1.84e-14;1!CL:0000084;6.57e-09;25!CL:0000860;6.81e-09;33!CL:0002057;6.81e-09;33!CL:0002087;3.06e-07;104!CL:0000738;7.95e-07;136!CL:0000473;8.11e-07;39!CL:0000234;8.11e-07;39|ontology_enrichment_celltype_v019_2=CL:0000988,3.07e-15,177;CL:0002127,2.75e-14,1;CL:0000914,2.75e-14,1;CL:0000911,2.75e-14,1;CL:0000814,2.75e-14,1;CL:0002042,2.75e-14,1;CL:0002039,2.75e-14,1;CL:0002040,2.75e-14,1;CL:0002041,2.75e-14,1;CL:0002087,1.38e-12,115;CL:0002031,5.18e-12,120;CL:0000738,1.86e-10,136;CL:0002032,2.04e-10,161;CL:0000837,2.04e-10,161;CL:0000037,6.34e-10,168;CL:0000838,6.75e-09,52;CL:0000084,7.00e-09,25;CL:0000827,7.00e-09,25;CL:0000542,1.01e-08,53;CL:0000051,1.01e-08,53;CL:0000860,6.89e-08,42;CL:0002057,6.89e-08,42;CL:0000893,8.60e-08,2;CL:0002489,8.60e-08,2;CL:0000809,8.60e-08,2;CL:0000808,8.60e-08,2;CL:0000894,8.60e-08,2;CL:0000806,8.60e-08,2;CL:0000807,8.60e-08,2;CL:0000805,8.60e-08,2;CL:0002425,8.60e-08,2;CL:0000473,6.87e-07,48;CL:0000234,6.87e-07,48|ontology_enrichment_development_v019=CL:0002425;7.03e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060060;5.42e-15;1!DOID:0060061;5.42e-15;1!DOID:8691;5.42e-15;1!DOID:9119;1.84e-14;1|ontology_enrichment_disease_v019_2=DOID:0060060,5.42e-15,1;DOID:0060061,5.42e-15,1;DOID:8691,5.42e-15,1;DOID:9119,1.07e-14,1|ontology_enrichment_uberon=UBERON:0002390!9.48e-14!102;UBERON:0003061!9.48e-14!102;UBERON:0002193!4.24e-12!112;UBERON:0002405!3.43e-10!115;UBERON:0002371!3.94e-10!80;UBERON:0001474!3.44e-09!86;UBERON:0004765!2.46e-07!101;UBERON:0001434!2.46e-07!101|ontology_enrichment_uberon_v019=UBERON:0002331;1.61e-12;10!UBERON:0000178;1.56e-08;15!UBERON:0000179;1.56e-08;15!UBERON:0000463;1.56e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.62e-12,10;UBERON:0000358,1.62e-12,10;UBERON:0000307,1.62e-12,10;UBERON:0000091,1.62e-12,10;UBERON:0000087,1.62e-12,10;UBERON:0007010,1.62e-12,10;UBERON:0007806,1.62e-12,10;UBERON:0008780,1.62e-12,10;UBERON:0005728,1.62e-12,10;UBERON:0002390,7.26e-10,98;UBERON:0003061,7.26e-10,98;UBERON:0002193,7.20e-09,108;UBERON:0000178,1.56e-08,15;UBERON:0000179,1.56e-08,15;UBERON:0000463,1.56e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.06730766284929,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0.236482229888585,0,1.29096936716765,1.35426486594342,0,0,0.449446968890169,0,0.641858054152187,0,0,0,0,0.290209238628584,2.8369261234557,0.622822248995575,0,0.521482918420201,0,0,2.94622108790052,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,0.144119953416961,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,1.6653598399891,0,0,0,0,6.90948982520366,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953619473882272,0,0,0,0,0,0,0,2.6686901581256,1.48276726735803,1.25306339406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,3.15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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1120 | |||
|description=CAGE_peak_at_chr5:95309942..95309984,+ | |||
|id=chr5:95309942..95309984,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.81e-19!182;CL:0002031!1.55e-17!124;CL:0002032!8.46e-17!165;CL:0000837!8.46e-17!165;CL:0000037!7.74e-16!172;CL:0000566!7.74e-16!172;CL:0000738!7.52e-15!140;CL:0002274!1.02e-13!5;CL:0000457!1.02e-13!5;CL:0002191!1.02e-13!5;CL:0000097!1.02e-13!5;CL:0000831!1.02e-13!5;CL:0002028!1.02e-13!5;CL:0002057!1.14e-12!42;CL:0002087!1.47e-12!119;CL:0000839!4.62e-12!70;CL:0000557!7.63e-12!71;CL:0000860!1.18e-11!45;CL:0000163!1.46e-11!9;CL:0000766!7.66e-11!76;CL:0000763!1.03e-10!112;CL:0000049!1.03e-10!112;CL:0000080!1.80e-07!6;CL:0002194!1.83e-07!63;CL:0000576!1.83e-07!63;CL:0000040!1.83e-07!63;CL:0000559!1.83e-07!63;CL:0002009!3.64e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.84e-14;1!CL:0000911;1.84e-14;1!CL:0000814;1.84e-14;1!CL:0000084;6.57e-09;25!CL:0000860;6.81e-09;33!CL:0002057;6.81e-09;33!CL:0002087;3.06e-07;104!CL:0000738;7.95e-07;136!CL:0000473;8.11e-07;39!CL:0000234;8.11e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.07e-15,177;CL:0002127,2.75e-14,1;CL:0000914,2.75e-14,1;CL:0000911,2.75e-14,1;CL:0000814,2.75e-14,1;CL:0002042,2.75e-14,1;CL:0002039,2.75e-14,1;CL:0002040,2.75e-14,1;CL:0002041,2.75e-14,1;CL:0002087,1.38e-12,115;CL:0002031,5.18e-12,120;CL:0000738,1.86e-10,136;CL:0002032,2.04e-10,161;CL:0000837,2.04e-10,161;CL:0000037,6.34e-10,168;CL:0000838,6.75e-09,52;CL:0000084,7.00e-09,25;CL:0000827,7.00e-09,25;CL:0000542,1.01e-08,53;CL:0000051,1.01e-08,53;CL:0000860,6.89e-08,42;CL:0002057,6.89e-08,42;CL:0000893,8.60e-08,2;CL:0002489,8.60e-08,2;CL:0000809,8.60e-08,2;CL:0000808,8.60e-08,2;CL:0000894,8.60e-08,2;CL:0000806,8.60e-08,2;CL:0000807,8.60e-08,2;CL:0000805,8.60e-08,2;CL:0002425,8.60e-08,2;CL:0000473,6.87e-07,48;CL:0000234,6.87e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002425;7.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.42e-15;1!DOID:0060061;5.42e-15;1!DOID:8691;5.42e-15;1!DOID:9119;1.84e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.42e-15,1;DOID:0060061,5.42e-15,1;DOID:8691,5.42e-15,1;DOID:9119,1.07e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.48e-14!102;UBERON:0003061!9.48e-14!102;UBERON:0002193!4.24e-12!112;UBERON:0002405!3.43e-10!115;UBERON:0002371!3.94e-10!80;UBERON:0001474!3.44e-09!86;UBERON:0004765!2.46e-07!101;UBERON:0001434!2.46e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.61e-12;10!UBERON:0000178;1.56e-08;15!UBERON:0000179;1.56e-08;15!UBERON:0000463;1.56e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.62e-12,10;UBERON:0000358,1.62e-12,10;UBERON:0000307,1.62e-12,10;UBERON:0000091,1.62e-12,10;UBERON:0000087,1.62e-12,10;UBERON:0007010,1.62e-12,10;UBERON:0007806,1.62e-12,10;UBERON:0008780,1.62e-12,10;UBERON:0005728,1.62e-12,10;UBERON:0002390,7.26e-10,98;UBERON:0003061,7.26e-10,98;UBERON:0002193,7.20e-09,108;UBERON:0000178,1.56e-08,15;UBERON:0000179,1.56e-08,15;UBERON:0000463,1.56e-08,15 | |||
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|short_description=p@chr5:95309942..95309984,+ | |||
}} |
Revision as of 16:59, 13 September 2013
Short description: | p@chr5:95309942..95309984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:95309942..95309984, + |
Coexpression cluster: | C1120_adult_hairy_mycosis_B_plasma_CD4_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.62e-12 | 10 |
blastocyst | 1.62e-12 | 10 |
blastula | 1.62e-12 | 10 |
bilaminar disc | 1.62e-12 | 10 |
inner cell mass | 1.62e-12 | 10 |
cleaving embryo | 1.62e-12 | 10 |
connecting stalk | 1.62e-12 | 10 |
inner cell mass derived epiblast | 1.62e-12 | 10 |
extraembryonic mesoderm | 1.62e-12 | 10 |
hematopoietic system | 7.26e-10 | 98 |
blood island | 7.26e-10 | 98 |
hemolymphoid system | 7.20e-09 | 108 |
blood | 1.56e-08 | 15 |
haemolymphatic fluid | 1.56e-08 | 15 |
organism substance | 1.56e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.42e-15 | 1 |
cutaneous T cell lymphoma | 5.42e-15 | 1 |
mycosis fungoides | 5.42e-15 | 1 |
acute myeloid leukemia | 1.07e-14 | 1 |
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