FFCP PHASE1:Mm9::chr19:12517323..12517331,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:12517323..12517331,+|id=chr19:12517323..12517331,+|ontology_enrichment_celltype=CL:0000557!1.62e-07!7|ontology_enrichment_celltype_v019_2=CL:0002476,2.13e-35,2;CL:0002194,2.61e-18,4;CL:0000766,2.61e-18,4;CL:0000234,2.61e-18,4;CL:0000576,2.61e-18,4;CL:0000235,2.61e-18,4;CL:0000864,2.61e-18,4;CL:0002009,2.61e-18,4;CL:0000040,2.61e-18,4;CL:0000559,2.61e-18,4;CL:0000473,6.26e-11,7;CL:0000557,6.26e-11,7|ontology_enrichment_disease=DOID:0060100!7.36e-17!3;DOID:4045!7.36e-17!3;DOID:0050686!1.08e-08!6|ontology_enrichment_disease_v019_2=DOID:0060100,4.77e-07,3;DOID:4045,4.77e-07,3|ontology_enrichment_uberon=UBERON:0000914!1.28e-07!17;UBERON:0002204!1.65e-07!32|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,0.523523743973798,22.3527965451785,2.04913645487534,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,6.03165135757089,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:12517323..12517331,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:12517323..12517331,+ | |||
|id=chr19:12517323..12517331,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.62e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.13e-35,2;CL:0002194,2.61e-18,4;CL:0000766,2.61e-18,4;CL:0000234,2.61e-18,4;CL:0000576,2.61e-18,4;CL:0000235,2.61e-18,4;CL:0000864,2.61e-18,4;CL:0002009,2.61e-18,4;CL:0000040,2.61e-18,4;CL:0000559,2.61e-18,4;CL:0000473,6.26e-11,7;CL:0000557,6.26e-11,7 | |||
|ontology_enrichment_disease=DOID:0060100!7.36e-17!3;DOID:4045!7.36e-17!3;DOID:0050686!1.08e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.77e-07,3;DOID:4045,4.77e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.28e-07!17;UBERON:0002204!1.65e-07!32 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0.7813353445238,0.523523743973798,22.3527965451785,2.04913645487534,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,6.03165135757089,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:12517323..12517331,+ | |||
}} |
Revision as of 17:05, 13 September 2013
Short description: | p@chr19:12517323..12517331, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12517323..12517331, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.13e-35 | 2 |
monopoietic cell | 2.61e-18 | 4 |
myeloid leukocyte | 2.61e-18 | 4 |
phagocyte | 2.61e-18 | 4 |
monocyte | 2.61e-18 | 4 |
macrophage | 2.61e-18 | 4 |
tissue-resident macrophage | 2.61e-18 | 4 |
macrophage dendritic cell progenitor | 2.61e-18 | 4 |
monoblast | 2.61e-18 | 4 |
promonocyte | 2.61e-18 | 4 |
defensive cell | 6.26e-11 | 7 |
granulocyte monocyte progenitor cell | 6.26e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.77e-07 | 3 |
muscle cancer | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.