FFCP PHASE1:Hg19::chr6:10412338..10412345,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7020|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11742|TSSclassifier=S|UniProt=|association_with_transcript=-59bp_to_ENST00000474952_5end|description=CAGE_peak_17_at_TFAP2A_5end|id=chr6:10412338..10412345,-|ontology_enrichment_celltype=CL:0000066!1.56e-32!254;CL:0002077!5.81e-11!33;CL:0002076!7.15e-11!43;CL:0000075!5.52e-10!27;CL:0000710!6.81e-09!20;CL:0000077!1.44e-07!19;CL:0000221!1.55e-07!71;CL:0000076!2.57e-07!62;CL:0000223!2.87e-07!59;CL:0000148!3.90e-07!10;CL:0000541!3.90e-07!10;CL:0002149!9.39e-07!6;CL:0002255!9.39e-07!6|ontology_enrichment_celltype_v019=CL:0000148;1.86e-18;10!CL:0000147;3.80e-13;14!CL:0002567;8.87e-11;3!CL:0000075;2.03e-09;27!CL:0000710;3.78e-09;20!CL:0002252;3.86e-09;1!CL:0002566;1.05e-08;1!CL:0000313;1.05e-08;1!CL:0002077;2.81e-08;34!CL:0000150;4.77e-08;9!CL:0000622;8.40e-07;5|ontology_enrichment_celltype_v019_2=CL:0000148,9.64e-19,10;CL:0000541,9.64e-19,10;CL:0000147,2.39e-13,14;CL:0002567,5.41e-11,3;CL:0002077,5.59e-10,34;CL:0000075,1.54e-09,27;CL:0000710,2.76e-09,20;CL:0002252,3.87e-09,1;CL:0000066,4.25e-09,253;CL:0002566,7.75e-09,1;CL:0000313,1.53e-08,1;CL:0000150,6.69e-08,9;CL:0002076,7.70e-08,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.48e-26!143;DOID:305!2.51e-24!106;DOID:14566!2.16e-21!239;DOID:162!2.00e-20!235;DOID:3001!9.39e-07!6|ontology_enrichment_disease_v019=DOID:3112;3.06e-09;1!DOID:2152;1.05e-08;1|ontology_enrichment_disease_v019_2=DOID:3112,3.06e-09,1;DOID:2152,1.53e-08,1|ontology_enrichment_uberon=UBERON:0001737!1.40e-08!9;UBERON:0001004!5.22e-08!72;UBERON:0000995!1.34e-07!21;UBERON:0001557!2.40e-07!19;UBERON:0005795!4.48e-07!22;UBERON:0003975!4.48e-07!22;UBERON:0004175!9.17e-07!25;UBERON:0004119!9.25e-07!169;UBERON:0000925!9.25e-07!169;UBERON:0006595!9.25e-07!169;UBERON:0000065!9.99e-07!53|ontology_enrichment_uberon_v019=UBERON:0004911;1.05e-08;1!UBERON:0003343;1.65e-08;4!UBERON:0004785;1.65e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-08,1;UBERON:0003343,2.15e-08,4;UBERON:0004785,2.15e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.25326102332916,0.662045904066094,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,0.80823028409406,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.804231779293047,0.462942225792648,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0.0895585227028483,0,0,0,0,0,0,0,1.58744735730423,1.52795370223311,0,1.71072446022705,1.64523988325318,0.901029173531752,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,0.788512075169673,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0.165018999841176,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.991709492165869,0.384380134730212,0.382838137483752,1.2138933702666,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0.222617410045812,0,0,0,0,1.51159648712566,0.306806047506464,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0.520855522170466,0.349839999984783,0,0,0,0.472775363535873,0.344743373241465,0,0.347249989866585,0,0,1.52581736317083,0.221158519862449,0,0,0.871507708151921,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.457987967009312,2.13213910407454,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.622129148383483,0,0,0,0,0.569219092059585,0.693373365065693,0.173559738335131,0.195984794828755,0.435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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-59bp_to_ENST00000474952_5end | |||
|description=CAGE_peak_17_at_TFAP2A_5end | |||
|id=chr6:10412338..10412345,- | |||
|ontology_enrichment_celltype=CL:0000066!1.56e-32!254;CL:0002077!5.81e-11!33;CL:0002076!7.15e-11!43;CL:0000075!5.52e-10!27;CL:0000710!6.81e-09!20;CL:0000077!1.44e-07!19;CL:0000221!1.55e-07!71;CL:0000076!2.57e-07!62;CL:0000223!2.87e-07!59;CL:0000148!3.90e-07!10;CL:0000541!3.90e-07!10;CL:0002149!9.39e-07!6;CL:0002255!9.39e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.86e-18;10!CL:0000147;3.80e-13;14!CL:0002567;8.87e-11;3!CL:0000075;2.03e-09;27!CL:0000710;3.78e-09;20!CL:0002252;3.86e-09;1!CL:0002566;1.05e-08;1!CL:0000313;1.05e-08;1!CL:0002077;2.81e-08;34!CL:0000150;4.77e-08;9!CL:0000622;8.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.64e-19,10;CL:0000541,9.64e-19,10;CL:0000147,2.39e-13,14;CL:0002567,5.41e-11,3;CL:0002077,5.59e-10,34;CL:0000075,1.54e-09,27;CL:0000710,2.76e-09,20;CL:0002252,3.87e-09,1;CL:0000066,4.25e-09,253;CL:0002566,7.75e-09,1;CL:0000313,1.53e-08,1;CL:0000150,6.69e-08,9;CL:0002076,7.70e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.48e-26!143;DOID:305!2.51e-24!106;DOID:14566!2.16e-21!239;DOID:162!2.00e-20!235;DOID:3001!9.39e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3112;3.06e-09;1!DOID:2152;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.06e-09,1;DOID:2152,1.53e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.40e-08!9;UBERON:0001004!5.22e-08!72;UBERON:0000995!1.34e-07!21;UBERON:0001557!2.40e-07!19;UBERON:0005795!4.48e-07!22;UBERON:0003975!4.48e-07!22;UBERON:0004175!9.17e-07!25;UBERON:0004119!9.25e-07!169;UBERON:0000925!9.25e-07!169;UBERON:0006595!9.25e-07!169;UBERON:0000065!9.99e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.05e-08;1!UBERON:0003343;1.65e-08;4!UBERON:0004785;1.65e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.53e-08,1;UBERON:0003343,2.15e-08,4;UBERON:0004785,2.15e-08,4 | |||
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 | |||
|short_description=p17@TFAP2A | |||
}} |
Revision as of 17:08, 13 September 2013
Short description: | p17@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000474952_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.64e-19 | 10 |
melanoblast | 9.64e-19 | 10 |
pigment cell | 2.39e-13 | 14 |
light melanocyte | 5.41e-11 | 3 |
ecto-epithelial cell | 5.59e-10 | 34 |
columnar/cuboidal epithelial cell | 1.54e-09 | 27 |
neurecto-epithelial cell | 2.76e-09 | 20 |
epithelial cell of esophagus | 3.87e-09 | 1 |
epithelial cell | 4.25e-09 | 253 |
dark melanocyte | 7.75e-09 | 1 |
serous secreting cell | 1.53e-08 | 1 |
glandular epithelial cell | 6.69e-08 | 9 |
endo-epithelial cell | 7.70e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.53e-08 | 1 |
mucosa of oral region | 2.15e-08 | 4 |
respiratory system mucosa | 2.15e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.06e-09 | 1 |
ovary epithelial cancer | 1.53e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.