FFCP PHASE1:Mm9::chr19:29141724..29141735,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503337|HGNC=|MCL_coexpression_id=15|UniProt=|association_with_transcript=-55bp_to_NR_045687_5end|description=CAGE_peak_3_at_Gm9895_5end|id=chr19:29141724..29141735,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.09e-10,6;UBERON:0004457,1.09e-10,6;UBERON:0000042,1.09e-10,6;UBERON:0004854,1.09e-10,6;UBERON:0009034,1.09e-10,6;UBERON:0002095,1.09e-10,6;UBERON:0004782,1.09e-10,6;UBERON:0003281,1.09e-10,6;UBERON:0009664,1.09e-10,6;UBERON:0002296,1.09e-10,6;UBERON:0005602,1.09e-10,6;UBERON:0001179,1.09e-10,6;UBERON:0006293,1.09e-10,6;UBERON:0002365,1.23e-08,25;UBERON:0002330,1.23e-08,25;UBERON:0002107,1.00e-07,22;UBERON:0007499,1.00e-07,22;UBERON:0006925,1.00e-07,22;UBERON:0009497,1.00e-07,22;UBERON:0000015,1.00e-07,22;UBERON:0002423,1.00e-07,22;UBERON:0006235,1.00e-07,22;UBERON:0008835,1.00e-07,22;UBERON:0003894,1.00e-07,22;UBERON:0004161,1.00e-07,22;UBERON:0008836,1.00e-07,22;UBERON:0005172,1.25e-07,49;UBERON:0005173,1.25e-07,49;UBERON:0002417,1.25e-07,49;UBERON:0000916,1.25e-07,49;UBERON:0009854,2.38e-07,23;UBERON:0009856,2.38e-07,23;UBERON:0004923,7.68e-07,24|phase1_expression=0,0.697950815278722,0.454999239389536,1.51232105653415,1.00179145989269,0.839396359559449,0.467225281191051,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0,2.42970320867791,4.19737126876888,0,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0,0,1.07735616342945,0,0.504060259519861,0.443461021310609,0,0,0,0.288851619751275,0,1.02084678131185,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0.578397427679647,0,0,0,1.93950101254089,0,0,0.628340120440365,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0.83115217823824,0.324482526135515,0,0.373220911830279,0.252722758433675,0.631325567659422,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.414251545071004,0.938104239924385,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.16455984991348,0.820837320395476,0.0810688095458557,0,0,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0.387904974335251,0,0.0632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0,1.50160595144485,0.589676985339609,1.34917267430912,3.85434230638156,1.68824011826692,1.78238096246994,1.72617682470486,1.45921704097532,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0,0.80275294993896,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,1.48473110675282,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,1.02131881726136,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.874442509889552,0,1.02522528478712,0,0.185194527369712,3.57900068308913,4.23752105935178,2.0590035588587,0.509935289981566,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.259229946583586,1.24267862617385,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,0,0.314578033277133,0.483168241652012,0.576060012515731,0.316011120628178,0,0.205421914329655,0,0.358053391334963,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0.386379188064381,0.563047426353546,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.962757628775446,0.758091635291392,0.25347929989024,0.754505365544305,0.655490552289177,0.128050304809739,0.229741875822453,0,0.115884325944855,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.436039249896986,0.376437521661322,0.25384382367503,0,0,0.271608227691724,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0,0,0,0,0.765153328275374,0,0.463735671240843|short_description=p3@Gm9895}} | ||
|EntrezGene=100503337 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_NR_045687_5end | |||
|description=CAGE_peak_3_at_Gm9895_5end | |||
|id=chr19:29141724..29141735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.09e-10,6;UBERON:0004457,1.09e-10,6;UBERON:0000042,1.09e-10,6;UBERON:0004854,1.09e-10,6;UBERON:0009034,1.09e-10,6;UBERON:0002095,1.09e-10,6;UBERON:0004782,1.09e-10,6;UBERON:0003281,1.09e-10,6;UBERON:0009664,1.09e-10,6;UBERON:0002296,1.09e-10,6;UBERON:0005602,1.09e-10,6;UBERON:0001179,1.09e-10,6;UBERON:0006293,1.09e-10,6;UBERON:0002365,1.23e-08,25;UBERON:0002330,1.23e-08,25;UBERON:0002107,1.00e-07,22;UBERON:0007499,1.00e-07,22;UBERON:0006925,1.00e-07,22;UBERON:0009497,1.00e-07,22;UBERON:0000015,1.00e-07,22;UBERON:0002423,1.00e-07,22;UBERON:0006235,1.00e-07,22;UBERON:0008835,1.00e-07,22;UBERON:0003894,1.00e-07,22;UBERON:0004161,1.00e-07,22;UBERON:0008836,1.00e-07,22;UBERON:0005172,1.25e-07,49;UBERON:0005173,1.25e-07,49;UBERON:0002417,1.25e-07,49;UBERON:0000916,1.25e-07,49;UBERON:0009854,2.38e-07,23;UBERON:0009856,2.38e-07,23;UBERON:0004923,7.68e-07,24 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,1.51232105653415,1.00179145989269,0.839396359559449,0.467225281191051,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0,2.42970320867791,4.19737126876888,0,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0,0,1.07735616342945,0,0.504060259519861,0.443461021310609,0,0,0,0.288851619751275,0,1.02084678131185,0.418531630736908,1.5626706890476,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.558365998002762,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0.578397427679647,0,0,0,1.93950101254089,0,0,0.628340120440365,0.255457055208591,0,0,0,0.299581278809645,0.457500602818626,0,0,0,0.83115217823824,0.324482526135515,0,0.373220911830279,0.252722758433675,0.631325567659422,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.414251545071004,0.938104239924385,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.16455984991348,0.820837320395476,0.0810688095458557,0,0,0.268412837520744,0,0,0.330418782983798,0.264450566663544,0,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0.387904974335251,0,0.0632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0,1.50160595144485,0.589676985339609,1.34917267430912,3.85434230638156,1.68824011826692,1.78238096246994,1.72617682470486,1.45921704097532,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0,0.80275294993896,0.586058432961016,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,1.48473110675282,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,1.05418608574999,0,1.02131881726136,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0.874442509889552,0,1.02522528478712,0,0.185194527369712,3.57900068308913,4.23752105935178,2.0590035588587,0.509935289981566,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.259229946583586,1.24267862617385,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,0,0.314578033277133,0.483168241652012,0.576060012515731,0.316011120628178,0,0.205421914329655,0,0.358053391334963,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0.386379188064381,0.563047426353546,0.73260649706906,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.962757628775446,0.758091635291392,0.25347929989024,0.754505365544305,0.655490552289177,0.128050304809739,0.229741875822453,0,0.115884325944855,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0.436039249896986,0.376437521661322,0.25384382367503,0,0,0.271608227691724,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.464810523557898,0,0,0,0,0.765153328275374,0,0.463735671240843 | |||
|short_description=p3@Gm9895 | |||
}} |
Revision as of 17:19, 13 September 2013
Short description: | p3@Gm9895 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm9895_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -55bp_to_NR_045687_5end |
EntrezGene: | Gm9895 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.09e-10 | 6 |
cavity lining | 1.09e-10 | 6 |
serous membrane | 1.09e-10 | 6 |
gastrointestinal system mesentery | 1.09e-10 | 6 |
stomach region | 1.09e-10 | 6 |
mesentery | 1.09e-10 | 6 |
gastrointestinal system serosa | 1.09e-10 | 6 |
mesentery of stomach | 1.09e-10 | 6 |
gut mesentery | 1.09e-10 | 6 |
dorsal mesentery | 1.09e-10 | 6 |
dorsal mesogastrium | 1.09e-10 | 6 |
peritoneal cavity | 1.09e-10 | 6 |
spleen primordium | 1.09e-10 | 6 |
exocrine gland | 1.23e-08 | 25 |
exocrine system | 1.23e-08 | 25 |
liver | 1.00e-07 | 22 |
epithelial sac | 1.00e-07 | 22 |
digestive gland | 1.00e-07 | 22 |
epithelium of foregut-midgut junction | 1.00e-07 | 22 |
anatomical boundary | 1.00e-07 | 22 |
hepatobiliary system | 1.00e-07 | 22 |
foregut-midgut junction | 1.00e-07 | 22 |
hepatic diverticulum | 1.00e-07 | 22 |
liver primordium | 1.00e-07 | 22 |
septum transversum | 1.00e-07 | 22 |
liver bud | 1.00e-07 | 22 |
abdomen element | 1.25e-07 | 49 |
abdominal segment element | 1.25e-07 | 49 |
abdominal segment of trunk | 1.25e-07 | 49 |
abdomen | 1.25e-07 | 49 |
digestive tract diverticulum | 2.38e-07 | 23 |
sac | 2.38e-07 | 23 |
organ component layer | 7.68e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.