FFCP PHASE1:Mm9::chr19:44471115..44471128,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=215|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:44471115..44471128,-|id=chr19:44471115..44471128,-|ontology_enrichment_celltype=CL:0000181!2.00e-07!5;CL:0000417!2.00e-07!5;CL:0000668!2.00e-07!5;CL:0000412!2.00e-07!5;CL:0000182!2.00e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,6.50e-20,5;CL:0000057,2.43e-07,1;CL:0000632,2.43e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.97e-07!25;UBERON:0002330!1.97e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.02e-22,25;UBERON:0002330,1.02e-22,25;UBERON:0002107,1.31e-16,22;UBERON:0007499,1.31e-16,22;UBERON:0006925,1.31e-16,22;UBERON:0009497,1.31e-16,22;UBERON:0000015,1.31e-16,22;UBERON:0002423,1.31e-16,22;UBERON:0006235,1.31e-16,22;UBERON:0008835,1.31e-16,22;UBERON:0003894,1.31e-16,22;UBERON:0004161,1.31e-16,22;UBERON:0008836,1.31e-16,22;UBERON:0009854,7.44e-16,23;UBERON:0009856,7.44e-16,23;UBERON:0001911,7.29e-13,2;UBERON:0000076,7.29e-13,2;UBERON:0005333,7.29e-13,2;UBERON:0008425,7.29e-13,2;UBERON:0005311,7.29e-13,2;UBERON:0002530,1.02e-09,65;UBERON:0005256,1.13e-09,45;UBERON:0003914,2.65e-09,47;UBERON:0005172,8.48e-09,49;UBERON:0005173,8.48e-09,49;UBERON:0002417,8.48e-09,49;UBERON:0000916,8.48e-09,49;UBERON:0005085,1.70e-07,13;UBERON:0002368,5.50e-07,60;UBERON:0003104,7.46e-07,61;UBERON:0009142,7.46e-07,61|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.65407546914134,0,0,0.699932108126813,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,0.289864488701678,3.44169550792555,6.79971333707751,2.15881276655127,12.3457519315057,8.96053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.445326417194474,0,0,0,0,0,1.0053327306374,0,3.03658649531814,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,6.52369753248069,0,0,0,0,0,0,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.402619256281115,0,0,0,2.3800550999719,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0.123397163921801,1.48226313543574,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,2.15276896226295,2.8946611281802,0.554259570499814,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0,0.159454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,0,6.88469982226651,1.65562047782839,0.160550589987792,0.117211686592203,0.327869890753351,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:44471115..44471128,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=215 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:44471115..44471128,- | |||
|id=chr19:44471115..44471128,- | |||
|ontology_enrichment_celltype=CL:0000181!2.00e-07!5;CL:0000417!2.00e-07!5;CL:0000668!2.00e-07!5;CL:0000412!2.00e-07!5;CL:0000182!2.00e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.50e-20,5;CL:0000057,2.43e-07,1;CL:0000632,2.43e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.97e-07!25;UBERON:0002330!1.97e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.02e-22,25;UBERON:0002330,1.02e-22,25;UBERON:0002107,1.31e-16,22;UBERON:0007499,1.31e-16,22;UBERON:0006925,1.31e-16,22;UBERON:0009497,1.31e-16,22;UBERON:0000015,1.31e-16,22;UBERON:0002423,1.31e-16,22;UBERON:0006235,1.31e-16,22;UBERON:0008835,1.31e-16,22;UBERON:0003894,1.31e-16,22;UBERON:0004161,1.31e-16,22;UBERON:0008836,1.31e-16,22;UBERON:0009854,7.44e-16,23;UBERON:0009856,7.44e-16,23;UBERON:0001911,7.29e-13,2;UBERON:0000076,7.29e-13,2;UBERON:0005333,7.29e-13,2;UBERON:0008425,7.29e-13,2;UBERON:0005311,7.29e-13,2;UBERON:0002530,1.02e-09,65;UBERON:0005256,1.13e-09,45;UBERON:0003914,2.65e-09,47;UBERON:0005172,8.48e-09,49;UBERON:0005173,8.48e-09,49;UBERON:0002417,8.48e-09,49;UBERON:0000916,8.48e-09,49;UBERON:0005085,1.70e-07,13;UBERON:0002368,5.50e-07,60;UBERON:0003104,7.46e-07,61;UBERON:0009142,7.46e-07,61 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.65407546914134,0,0,0.699932108126813,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,0.289864488701678,3.44169550792555,6.79971333707751,2.15881276655127,12.3457519315057,8.96053774194671,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.445326417194474,0,0,0,0,0,1.0053327306374,0,3.03658649531814,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,6.52369753248069,0,0,0,0,0,0,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.402619256281115,0,0,0,2.3800550999719,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.31399745568275,0.123397163921801,1.48226313543574,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,2.15276896226295,2.8946611281802,0.554259570499814,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0,0.159454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,0,6.88469982226651,1.65562047782839,0.160550589987792,0.117211686592203,0.327869890753351,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0.556275906031529,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0.632022241256357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:44471115..44471128,- | |||
}} |
Revision as of 17:45, 13 September 2013
Short description: | p@chr19:44471115..44471128, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:44471115..44471128, - |
Coexpression cluster: | MCL_coexpression_mm9:215 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.50e-20 | 5 |
fibroblast | 2.43e-07 | 1 |
hepatic stellate cell | 2.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.02e-22 | 25 |
exocrine system | 1.02e-22 | 25 |
liver | 1.31e-16 | 22 |
epithelial sac | 1.31e-16 | 22 |
digestive gland | 1.31e-16 | 22 |
epithelium of foregut-midgut junction | 1.31e-16 | 22 |
anatomical boundary | 1.31e-16 | 22 |
hepatobiliary system | 1.31e-16 | 22 |
foregut-midgut junction | 1.31e-16 | 22 |
hepatic diverticulum | 1.31e-16 | 22 |
liver primordium | 1.31e-16 | 22 |
septum transversum | 1.31e-16 | 22 |
liver bud | 1.31e-16 | 22 |
digestive tract diverticulum | 7.44e-16 | 23 |
sac | 7.44e-16 | 23 |
mammary gland | 7.29e-13 | 2 |
external ectoderm | 7.29e-13 | 2 |
mammary bud | 7.29e-13 | 2 |
mammary ridge | 7.29e-13 | 2 |
mammary placode | 7.29e-13 | 2 |
gland | 1.02e-09 | 65 |
trunk mesenchyme | 1.13e-09 | 45 |
epithelial tube | 2.65e-09 | 47 |
abdomen element | 8.48e-09 | 49 |
abdominal segment element | 8.48e-09 | 49 |
abdominal segment of trunk | 8.48e-09 | 49 |
abdomen | 8.48e-09 | 49 |
ectodermal placode | 1.70e-07 | 13 |
endocrine gland | 5.50e-07 | 60 |
mesenchyme | 7.46e-07 | 61 |
entire embryonic mesenchyme | 7.46e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.