FFCP PHASE1:Mm9::chr19:46120023..46120032,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16825|HGNC=|UniProt=D3Z1C5|association_with_transcript=-319bp_to_ENSMUST00000152946_5end|description=CAGE_peak_14_at_Ldb1_5end|id=chr19:46120023..46120032,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.31e-14,7;UBERON:0004710,1.31e-14,7;UBERON:0005419,1.31e-14,7;UBERON:0005417,1.31e-14,7;UBERON:0005729,1.31e-14,7;UBERON:0010708,1.07e-12,8;UBERON:0000026,3.15e-08,12;UBERON:0004708,3.15e-08,12;UBERON:0002101,3.15e-08,12;UBERON:0004357,3.15e-08,12;UBERON:0004347,3.15e-08,12;UBERON:0005732,3.15e-08,12;UBERON:0005733,3.15e-08,12;UBERON:0010707,1.53e-07,13|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.84473233291,0.234064526321993,0.856089841127525,0,0.856003649656029,0.0874204024189974,0.666219523631325,0,0,0.315462165358238,0,0,0.17008658030214,0.794327609607082,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.414758449233911,1.21505344498522,0.210324961351382,0,0.441737081903227,0.489963196859816,0.575072826109418,0.919218786610021,0,0.383062014255563,0.153606533256243,0.923204014111357,0.457438218012048,1.04182674111352,0.837548997004143,1.12552522006336,0.763991238884051,0,0.142371680799103,0.559198337475902,0.151452386666368,0.151143120213571,0.869593466105033,1.72084775396277,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.23517741427141,0.125666591329675,0.741584903203122,0.144599356919912,0,0.647067399789637,0.220841518460394,0,0,0,0.209446706813455,0,0.479260498023681,0,0,0,0.915001205637253,0.502617408451458,0.173824320192276,0,0.20778804455956,0.162241263067758,1.12023300235348,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,1.50704817835715,1.08858398642125,0.384341160854549,1.12442069471675,0,0.431135985865684,1.32374256117473,1.40760899331159,1.31517439456545,1.11218899690239,1.39300866608867,1.64625709126355,0.398068533636986,0,0,0,0.621377317606506,0,0.36012412292203,0,0.787056926989615,0.308534225774757,0.697601834251224,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0,0.219550115291051,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.456994050438915,0,0.407302655690628,0.775809948670503,0.771494018793504,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.964887042726734,0.554259570499814,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,0.975668239288994,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0,0.433947175744535,0,0,0,0,0,0.468846746368813,0.163934945376675,0.504941854408746,1.57754109708128,0,0.861693590931196,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0,0.395287777946524,0,0.283880170416537,1.42452482933804,0.162886959353576,0.824850614862677,0,0.485561272309963,0,0.188605079755898,0,0,0,1.09060118843252,0,0,0,1.03135543248187,0.340439605753788,0.36012218806262,0.388076051348264,1.07168517515796,0.709360934569094,1.24858172321449,1.48094118541909,0.304464949114599,0.469343416127421,0.21183207086382,0,0.65954501176592,0.645857706783622,0.844380948994182,0.358117032009409,0.656563598980245,0.291480836629851,0.18542530201051,0.170870880797853,0.82554747185289,0.185194527369712,0.188368457004691,0.27338845544205,0,0.509935289981566,0.279902904647316,0.138199973804424,0,1.26534397432454,1.01659733563424,0.648032044930808,0.627264888043406,0.218362563746178,0.269728692769641,0.495920734352016,0,0.259229946583586,0,0,1.19613236835183,0.330916980914195,0.777804753376191,0.774958940866387,0.506868376472335,0.58678619322877,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.537080087002444,0.39736270956253,0.600977247599844,1.03382669022204,0.504832249740738,0.228620419965,0.201652370273681,0.292373642219257,0.769694733122636,0.116876902181569,0.453460767230423,0.665957860122194,0.807424709485281,0.839423081820392,0.579568782096571,0.750729901804728,0.549454872801795,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0.830298780673413,0.798049746802062,1.19513524027894,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.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| ||
|EntrezGene=16825 | |||
|HGNC= | |||
|UniProt=D3Z1C5 | |||
|association_with_transcript=-319bp_to_ENSMUST00000152946_5end | |||
|description=CAGE_peak_14_at_Ldb1_5end | |||
|id=chr19:46120023..46120032,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.31e-14,7;UBERON:0004710,1.31e-14,7;UBERON:0005419,1.31e-14,7;UBERON:0005417,1.31e-14,7;UBERON:0005729,1.31e-14,7;UBERON:0010708,1.07e-12,8;UBERON:0000026,3.15e-08,12;UBERON:0004708,3.15e-08,12;UBERON:0002101,3.15e-08,12;UBERON:0004357,3.15e-08,12;UBERON:0004347,3.15e-08,12;UBERON:0005732,3.15e-08,12;UBERON:0005733,3.15e-08,12;UBERON:0010707,1.53e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.84473233291,0.234064526321993,0.856089841127525,0,0.856003649656029,0.0874204024189974,0.666219523631325,0,0,0.315462165358238,0,0,0.17008658030214,0.794327609607082,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.414758449233911,1.21505344498522,0.210324961351382,0,0.441737081903227,0.489963196859816,0.575072826109418,0.919218786610021,0,0.383062014255563,0.153606533256243,0.923204014111357,0.457438218012048,1.04182674111352,0.837548997004143,1.12552522006336,0.763991238884051,0,0.142371680799103,0.559198337475902,0.151452386666368,0.151143120213571,0.869593466105033,1.72084775396277,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.23517741427141,0.125666591329675,0.741584903203122,0.144599356919912,0,0.647067399789637,0.220841518460394,0,0,0,0.209446706813455,0,0.479260498023681,0,0,0,0.915001205637253,0.502617408451458,0.173824320192276,0,0.20778804455956,0.162241263067758,1.12023300235348,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,1.50704817835715,1.08858398642125,0.384341160854549,1.12442069471675,0,0.431135985865684,1.32374256117473,1.40760899331159,1.31517439456545,1.11218899690239,1.39300866608867,1.64625709126355,0.398068533636986,0,0,0,0.621377317606506,0,0.36012412292203,0,0.787056926989615,0.308534225774757,0.697601834251224,0.536546802799238,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0,0.219550115291051,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0.426576501070468,0.928946687441754,0.77320476793256,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.758671603812327,0.456994050438915,0,0.407302655690628,0.775809948670503,0.771494018793504,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.964887042726734,0.554259570499814,0.189491411770485,0.325929952884052,0.848725428875941,0.704070744865506,0.335012514883631,0.952174563544055,0.975668239288994,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0,0.433947175744535,0,0,0,0,0,0.468846746368813,0.163934945376675,0.504941854408746,1.57754109708128,0,0.861693590931196,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0,0.395287777946524,0,0.283880170416537,1.42452482933804,0.162886959353576,0.824850614862677,0,0.485561272309963,0,0.188605079755898,0,0,0,1.09060118843252,0,0,0,1.03135543248187,0.340439605753788,0.36012218806262,0.388076051348264,1.07168517515796,0.709360934569094,1.24858172321449,1.48094118541909,0.304464949114599,0.469343416127421,0.21183207086382,0,0.65954501176592,0.645857706783622,0.844380948994182,0.358117032009409,0.656563598980245,0.291480836629851,0.18542530201051,0.170870880797853,0.82554747185289,0.185194527369712,0.188368457004691,0.27338845544205,0,0.509935289981566,0.279902904647316,0.138199973804424,0,1.26534397432454,1.01659733563424,0.648032044930808,0.627264888043406,0.218362563746178,0.269728692769641,0.495920734352016,0,0.259229946583586,0,0,1.19613236835183,0.330916980914195,0.777804753376191,0.774958940866387,0.506868376472335,0.58678619322877,0.781226309063701,0.629156066554265,0,0,0,0.202725215290164,0.616265742988964,0.129920822977795,0.537080087002444,0.39736270956253,0.600977247599844,1.03382669022204,0.504832249740738,0.228620419965,0.201652370273681,0.292373642219257,0.769694733122636,0.116876902181569,0.453460767230423,0.665957860122194,0.807424709485281,0.839423081820392,0.579568782096571,0.750729901804728,0.549454872801795,0,0,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0.830298780673413,0.798049746802062,1.19513524027894,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.618105171716683,1.28367683836726,0.252697211763798,0.25347929989024,0.754505365544305,0.655490552289177,0.512201219238954,0.631790158511746,0.952587382566147,0.579421629724277,0.77163688185482,0.412085900803307,1.32479028120958,0.342869252385415,1.06485483695602,0.238436189947321,0.726732083161643,0.846984423737976,1.01537529470012,0.914639864363863,0.263069711437843,0.814824683075171,2.24456908663095,0.593175090620871,1.37906275325789,0.409231043169689,0.77468420592983,0.578719832943424,0.749431733813838,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0 | |||
|short_description=p14@Ldb1 | |||
}} |
Revision as of 17:49, 13 September 2013
Short description: | p14@Ldb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Ldb1_5end |
Coexpression cluster: | NA |
Association with transcript: | -319bp_to_ENSMUST00000152946_5end |
EntrezGene: | Ldb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 1.31e-14 | 7 |
pectoral appendage | 1.31e-14 | 7 |
pectoral appendage bud | 1.31e-14 | 7 |
forelimb bud | 1.31e-14 | 7 |
forelimb/pectoral fin field | 1.31e-14 | 7 |
pectoral complex | 1.07e-12 | 8 |
appendage | 3.15e-08 | 12 |
paired limb/fin | 3.15e-08 | 12 |
limb | 3.15e-08 | 12 |
paired limb/fin bud | 3.15e-08 | 12 |
limb bud | 3.15e-08 | 12 |
limb/fin field | 3.15e-08 | 12 |
limb field | 3.15e-08 | 12 |
appendage girdle complex | 1.53e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.