FFCP PHASE1:Mm9::chr19:4711358..4711361,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20743|HGNC=|MCL_coexpression_id=42|UniProt=Q68FG2|association_with_transcript=135bp_to_NM_021287,uc008gan.1_5end|description=CAGE_peak_19_at_Spnb3_5end|id=chr19:4711358..4711361,+|ontology_enrichment_celltype=CL:0000117!6.93e-15!23;CL:0000337!6.93e-15!23;CL:0002609!5.43e-11!6;CL:0000540!1.17e-09!33;CL:0000047!1.17e-09!33;CL:0000031!1.17e-09!33;CL:0000404!1.17e-09!33;CL:0000393!8.10e-08!39;CL:0000211!8.10e-08!39;CL:0002319!7.02e-07!43|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.82e-29!34;UBERON:0002791!3.16e-28!29;UBERON:0003528!3.16e-28!29;UBERON:0001893!3.16e-28!29;UBERON:0002780!5.82e-25!39;UBERON:0001890!5.82e-25!39;UBERON:0006240!5.82e-25!39;UBERON:0000956!1.83e-24!21;UBERON:0001869!1.83e-24!21;UBERON:0000203!1.83e-24!21;UBERON:0001049!2.16e-24!52;UBERON:0005068!2.16e-24!52;UBERON:0006241!2.16e-24!52;UBERON:0007135!2.16e-24!52;UBERON:0003080!3.15e-24!40;UBERON:0002616!8.23e-24!49;UBERON:0000955!3.06e-23!50;UBERON:0006238!3.06e-23!50;UBERON:0001017!1.34e-19!73;UBERON:0005743!1.34e-19!73;UBERON:0003056!5.57e-19!49;UBERON:0000073!6.13e-19!75;UBERON:0001016!6.13e-19!75;UBERON:0000033!1.81e-17!63;UBERON:0002346!1.49e-16!71;UBERON:0003075!1.49e-16!71;UBERON:0007284!1.49e-16!71;UBERON:0002619!8.29e-16!17;UBERON:0004121!1.54e-12!102;UBERON:0000924!1.54e-12!102;UBERON:0006601!1.54e-12!102;UBERON:0007811!1.57e-11!86;UBERON:0002021!7.40e-11!10;UBERON:0000411!7.40e-11!10;UBERON:0001950!7.40e-11!10;UBERON:0000153!3.79e-10!94;UBERON:0000025!1.83e-08!114;UBERON:0004111!1.37e-07!122;UBERON:0000064!1.88e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0001851,1.10e-29,1;UBERON:0005889,1.10e-29,1;UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23616767033638,0,0,0,0,0,0,0.125654352112864,0.173824320192276,1.53429274398198,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p19@Spnb3}} | ||
|EntrezGene=20743 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=Q68FG2 | |||
|association_with_transcript=135bp_to_NM_021287,uc008gan.1_5end | |||
|description=CAGE_peak_19_at_Spnb3_5end | |||
|id=chr19:4711358..4711361,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.93e-15!23;CL:0000337!6.93e-15!23;CL:0002609!5.43e-11!6;CL:0000540!1.17e-09!33;CL:0000047!1.17e-09!33;CL:0000031!1.17e-09!33;CL:0000404!1.17e-09!33;CL:0000393!8.10e-08!39;CL:0000211!8.10e-08!39;CL:0002319!7.02e-07!43 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.82e-29!34;UBERON:0002791!3.16e-28!29;UBERON:0003528!3.16e-28!29;UBERON:0001893!3.16e-28!29;UBERON:0002780!5.82e-25!39;UBERON:0001890!5.82e-25!39;UBERON:0006240!5.82e-25!39;UBERON:0000956!1.83e-24!21;UBERON:0001869!1.83e-24!21;UBERON:0000203!1.83e-24!21;UBERON:0001049!2.16e-24!52;UBERON:0005068!2.16e-24!52;UBERON:0006241!2.16e-24!52;UBERON:0007135!2.16e-24!52;UBERON:0003080!3.15e-24!40;UBERON:0002616!8.23e-24!49;UBERON:0000955!3.06e-23!50;UBERON:0006238!3.06e-23!50;UBERON:0001017!1.34e-19!73;UBERON:0005743!1.34e-19!73;UBERON:0003056!5.57e-19!49;UBERON:0000073!6.13e-19!75;UBERON:0001016!6.13e-19!75;UBERON:0000033!1.81e-17!63;UBERON:0002346!1.49e-16!71;UBERON:0003075!1.49e-16!71;UBERON:0007284!1.49e-16!71;UBERON:0002619!8.29e-16!17;UBERON:0004121!1.54e-12!102;UBERON:0000924!1.54e-12!102;UBERON:0006601!1.54e-12!102;UBERON:0007811!1.57e-11!86;UBERON:0002021!7.40e-11!10;UBERON:0000411!7.40e-11!10;UBERON:0001950!7.40e-11!10;UBERON:0000153!3.79e-10!94;UBERON:0000025!1.83e-08!114;UBERON:0004111!1.37e-07!122;UBERON:0000064!1.88e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,1.10e-29,1;UBERON:0005889,1.10e-29,1;UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23616767033638,0,0,0,0,0,0,0.125654352112864,0.173824320192276,1.53429274398198,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,0,0.515559547031063,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p19@Spnb3 | |||
}} |
Revision as of 17:54, 13 September 2013
Short description: | p19@Spnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Spnb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 135bp_to_NM_021287, uc008gan.1_5end |
EntrezGene: | Spnb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortex | 1.10e-29 | 1 |
zygote cortex | 1.10e-29 | 1 |
cerebellum | 1.23e-08 | 4 |
regional part of metencephalon | 1.23e-08 | 4 |
metencephalon | 1.23e-08 | 4 |
future metencephalon | 1.23e-08 | 4 |
rhombic lip | 1.23e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.