FFCP PHASE1:Mm9::chr19:53102858..53102869,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=781|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:53102858..53102869,-|id=chr19:53102858..53102869,-|ontology_enrichment_celltype=CL:0000239!4.59e-09!6;CL:0000677!4.59e-09!6;CL:0000212!4.59e-09!6;CL:0000584!4.59e-09!6;CL:0000473!1.03e-07!3;CL:0000627!1.03e-07!3;CL:0000682!1.03e-07!3;CL:0000075!1.06e-07!7|ontology_enrichment_celltype_v019_2=CL:0000682,2.60e-17,3;CL:0000239,6.57e-09,6;CL:0000677,6.57e-09,6;CL:0000584,6.57e-09,6;CL:0000473,9.94e-08,7;CL:0000075,1.05e-07,7;CL:0000066,1.20e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.94e-17!43;UBERON:0000344!8.65e-16!15;UBERON:0001242!1.60e-12!13;UBERON:0000060!1.60e-12!13;UBERON:0001262!1.60e-12!13;UBERON:0004786!1.60e-12!13;UBERON:0004923!2.04e-12!24;UBERON:0005409!4.02e-11!59;UBERON:0000331!8.91e-08!3;UBERON:0002116!8.91e-08!3;UBERON:0001204!8.91e-08!3;UBERON:0001168!8.91e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.39e-17,31;UBERON:0002108,2.20e-13,4;UBERON:0001242,6.79e-11,13;UBERON:0001262,6.79e-11,13;UBERON:0004786,6.79e-11,13;UBERON:0005409,1.10e-10,47;UBERON:0000344,2.00e-09,15;UBERON:0000331,7.77e-09,3;UBERON:0002116,7.77e-09,3;UBERON:0001204,7.77e-09,3;UBERON:0001168,7.77e-09,3|phase1_expression=0,2.79180326111489,0.454999239389536,3.93203474698879,1.00179145989269,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.639969691173627,0.45881856213434,5.16808767703518,2.15380998079537,1.50829862880122,4.18051522804023,7.81293402255785,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.380451252225118,3.32170343081158,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,2.37751854862164,1.99141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,1.91893192373483,1.8839847340965,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr19:53102858..53102869,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=781 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:53102858..53102869,- | |||
|id=chr19:53102858..53102869,- | |||
|ontology_enrichment_celltype=CL:0000239!4.59e-09!6;CL:0000677!4.59e-09!6;CL:0000212!4.59e-09!6;CL:0000584!4.59e-09!6;CL:0000473!1.03e-07!3;CL:0000627!1.03e-07!3;CL:0000682!1.03e-07!3;CL:0000075!1.06e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.60e-17,3;CL:0000239,6.57e-09,6;CL:0000677,6.57e-09,6;CL:0000584,6.57e-09,6;CL:0000473,9.94e-08,7;CL:0000075,1.05e-07,7;CL:0000066,1.20e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.94e-17!43;UBERON:0000344!8.65e-16!15;UBERON:0001242!1.60e-12!13;UBERON:0000060!1.60e-12!13;UBERON:0001262!1.60e-12!13;UBERON:0004786!1.60e-12!13;UBERON:0004923!2.04e-12!24;UBERON:0005409!4.02e-11!59;UBERON:0000331!8.91e-08!3;UBERON:0002116!8.91e-08!3;UBERON:0001204!8.91e-08!3;UBERON:0001168!8.91e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.39e-17,31;UBERON:0002108,2.20e-13,4;UBERON:0001242,6.79e-11,13;UBERON:0001262,6.79e-11,13;UBERON:0004786,6.79e-11,13;UBERON:0005409,1.10e-10,47;UBERON:0000344,2.00e-09,15;UBERON:0000331,7.77e-09,3;UBERON:0002116,7.77e-09,3;UBERON:0001204,7.77e-09,3;UBERON:0001168,7.77e-09,3 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,3.93203474698879,1.00179145989269,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.639969691173627,0.45881856213434,5.16808767703518,2.15380998079537,1.50829862880122,4.18051522804023,7.81293402255785,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0.380451252225118,3.32170343081158,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,2.37751854862164,1.99141273254367,0,0,0,0,0,0.0701358198903186,0.189709611372772,1.91893192373483,1.8839847340965,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr19:53102858..53102869,- | |||
}} |
Revision as of 18:00, 13 September 2013
Short description: | p@chr19:53102858..53102869, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:53102858..53102869, - |
Coexpression cluster: | MCL_coexpression_mm9:781 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.60e-17 | 3 |
brush border epithelial cell | 6.57e-09 | 6 |
gut absorptive cell | 6.57e-09 | 6 |
enterocyte | 6.57e-09 | 6 |
defensive cell | 9.94e-08 | 7 |
columnar/cuboidal epithelial cell | 1.05e-07 | 7 |
epithelial cell | 1.20e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.39e-17 | 31 |
small intestine | 2.20e-13 | 4 |
intestinal mucosa | 6.79e-11 | 13 |
wall of intestine | 6.79e-11 | 13 |
gastrointestinal system mucosa | 6.79e-11 | 13 |
gastrointestinal system | 1.10e-10 | 47 |
mucosa | 2.00e-09 | 15 |
ileal mucosa | 7.77e-09 | 3 |
ileum | 7.77e-09 | 3 |
mucosa of small intestine | 7.77e-09 | 3 |
wall of small intestine | 7.77e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.