FFCP PHASE1:Mm9::chr19:53384985..53385042,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17859|HGNC=|MCL_coexpression_id=163|UniProt=Q3U3X2,Q6P2L3|association_with_transcript=0bp_to_ENSMUST00000003870,NM_001008542,uc008hwo.1_5end|description=CAGE_peak_1_at_Mxi1_5end|id=chr19:53384985..53385042,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.98e-09,47;UBERON:0000160,2.33e-08,31;UBERON:0004121,5.60e-08,95;UBERON:0000924,5.60e-08,95;UBERON:0006601,5.60e-08,95|phase1_expression=54.1303103214204,505.316390261795,320.774463769623,418.91293265996,427.76495337418,37.1013190925276,39.7141489012394,8.90950931746876,55.8931226942117,69.2830997913101,1.19852577757853,0.319088635981346,1.02720437958723,0.611942816932982,38.3076226088012,58.9203028104394,80.4496159847369,5.52058789376916,4.52477630898938,8.06340338416257,24.1522944029038,30.28374011627,33.9559725880616,100.155256668673,85.1108432759201,212.465826722557,117.167262955268,119.371062907983,147.648196917603,147.1855957798,55.2108971531709,45.0871778156338,43.0545351309199,79.2408405077194,12.7094712690561,12.1351291111699,13.4751775133164,239.400092781511,133.60834391357,202.080165173886,273.527641934422,268.436875588669,227.704355571611,26.0606413209445,23.6208249741469,21.2914232507551,61.8089162034951,22.0205407944251,22.4079906389161,26.053606475954,32.4768498170841,27.3129872293446,6.87908684836719,21.035502118329,8.4023449785616,9.77585856936598,15.7593391966316,13.4074743992135,61.3018876404581,59.2469896784677,62.1154775436056,10.165335962074,22.2323699027785,18.8978940629094,20.7661936139065,19.8934432184908,43.7416161356871,59.9380556301625,73.4122455144022,71.2831354391327,69.4072372459561,17.9960120174396,18.1112203580323,66.51250397372,76.1971494594979,80.8912532216818,17.6185409599022,21.1960981221412,29.1852413186863,57.7661940258249,50.5926669121325,42.7148963856543,22.3346399201105,19.6966913511088,25.6701056265041,21.8025153250514,17.3693450574906,34.2974980318553,12.2676433199758,30.7576249634617,17.6817338108023,4.30211938490693,10.879541339324,5.93673510801599,3.89865850468601,12.5447528387254,24.4373291029248,18.2360445158522,21.5622383820381,19.0803370235584,54.7880902931287,21.815501160434,45.8649431471962,21.3320010945999,35.9375128078615,30.6565437224869,26.7927955857835,31.1721991633034,13.2058320660058,9.94562331734326,16.3076207160168,23.1393763517227,21.9084722393256,15.8258772580254,18.34383831317,9.92766071504436,128.541383221874,17.7857209011491,72.5380652598897,19.7355556935839,36.8805335828857,43.63877278217,136.065985689229,62.9478713574826,42.7271281899448,147.143263800149,15.6957813102756,13.7977628128484,13.9777249780371,29.8083372415597,36.6000482254901,26.5130682958144,26.5951209894183,20.7129520437568,29.0903262383384,23.3627418817571,16.4979769437512,43.6668466841426,17.4378703319236,37.4586503477924,31.4891471969743,29.8872735763515,39.6136685571768,39.9367767264645,38.0324030255923,51.6298292747945,49.9430191903355,64.1584359432759,38.5866707349788,42.3597619575915,39.9409051852164,27.1802708210193,40.3168511377117,54.327337977458,63.1751158772386,16.3208098791164,14.0442637462647,17.7570055909153,13.6398479709884,28.3762308373638,29.315757497637,27.1893712806132,28.8828577413957,29.1211062986158,28.6936829970524,25.5787339225449,27.0956135413615,19.4998121753173,17.7724637906559,16.7450813360677,20.2672023864639,17.2515985161892,20.1986106067767,17.8494536951294,23.5524742391823,39.0008480917488,388.90290757193,174.008472864612,16.2099070406778,20.9013004674395,22.8095406540105,33.0760980382282,48.4784135581817,59.7308465993436,109.141684155238,92.7255115096181,93.7480328825005,95.6980630517935,108.984924699588,109.655967855815,91.6425331468703,91.2067031505002,26.7431740343845,18.3940105301663,29.3040112750009,21.7906920794486,19.9771061782655,17.0430042333474,14.4811670014549,10.9231509504906,13.3448918665169,11.8461277364928,7.11486305009157,27.6962875488716,23.7836384086976,24.2851081375642,41.7891850060316,37.1412826018722,37.4300002118687,48.9083433666378,31.4542339943569,17.0228076176611,18.6898668485561,8.55924179637558,6.55279113540577,5.80931419278357,9.86685774370517,9.64887042726734,14.2259956428286,18.759649765278,17.1113225264127,17.9929790921699,16.4283173801951,22.7808510120869,23.0902331659433,19.7084984336377,21.438379598442,22.589398344175,18.1778436269535,17.6972379892997,13.9874835311375,13.8863096238251,10.5553898757491,3.26343410291226,35.4070276573706,13.5209005689319,27.1330497079368,27.4275346625755,18.5246488275643,17.4204939771017,32.8128548192907,32.406415776621,43.946373137491,35.6063508949303,43.4457414460669,55.4830000346112,35.6233417473907,42.9616111129628,52.5732744668876,55.5885877409726,24.2717545706139,23.3265940804104,21.501078634672,24.7455184458803,9.2921596837974,18.2085477116236,10.5813244937663,11.127699705598,13.2885851796348,18.7535440245796,33.5956781118688,11.9966130727577,7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| ||
|EntrezGene=17859 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|UniProt=Q3U3X2,Q6P2L3 | |||
|association_with_transcript=0bp_to_ENSMUST00000003870,NM_001008542,uc008hwo.1_5end | |||
|description=CAGE_peak_1_at_Mxi1_5end | |||
|id=chr19:53384985..53385042,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,9.98e-09,47;UBERON:0000160,2.33e-08,31;UBERON:0004121,5.60e-08,95;UBERON:0000924,5.60e-08,95;UBERON:0006601,5.60e-08,95 | |||
|phase1_expression=54.1303103214204,505.316390261795,320.774463769623,418.91293265996,427.76495337418,37.1013190925276,39.7141489012394,8.90950931746876,55.8931226942117,69.2830997913101,1.19852577757853,0.319088635981346,1.02720437958723,0.611942816932982,38.3076226088012,58.9203028104394,80.4496159847369,5.52058789376916,4.52477630898938,8.06340338416257,24.1522944029038,30.28374011627,33.9559725880616,100.155256668673,85.1108432759201,212.465826722557,117.167262955268,119.371062907983,147.648196917603,147.1855957798,55.2108971531709,45.0871778156338,43.0545351309199,79.2408405077194,12.7094712690561,12.1351291111699,13.4751775133164,239.400092781511,133.60834391357,202.080165173886,273.527641934422,268.436875588669,227.704355571611,26.0606413209445,23.6208249741469,21.2914232507551,61.8089162034951,22.0205407944251,22.4079906389161,26.053606475954,32.4768498170841,27.3129872293446,6.87908684836719,21.035502118329,8.4023449785616,9.77585856936598,15.7593391966316,13.4074743992135,61.3018876404581,59.2469896784677,62.1154775436056,10.165335962074,22.2323699027785,18.8978940629094,20.7661936139065,19.8934432184908,43.7416161356871,59.9380556301625,73.4122455144022,71.2831354391327,69.4072372459561,17.9960120174396,18.1112203580323,66.51250397372,76.1971494594979,80.8912532216818,17.6185409599022,21.1960981221412,29.1852413186863,57.7661940258249,50.5926669121325,42.7148963856543,22.3346399201105,19.6966913511088,25.6701056265041,21.8025153250514,17.3693450574906,34.2974980318553,12.2676433199758,30.7576249634617,17.6817338108023,4.30211938490693,10.879541339324,5.93673510801599,3.89865850468601,12.5447528387254,24.4373291029248,18.2360445158522,21.5622383820381,19.0803370235584,54.7880902931287,21.815501160434,45.8649431471962,21.3320010945999,35.9375128078615,30.6565437224869,26.7927955857835,31.1721991633034,13.2058320660058,9.94562331734326,16.3076207160168,23.1393763517227,21.9084722393256,15.8258772580254,18.34383831317,9.92766071504436,128.541383221874,17.7857209011491,72.5380652598897,19.7355556935839,36.8805335828857,43.63877278217,136.065985689229,62.9478713574826,42.7271281899448,147.143263800149,15.6957813102756,13.7977628128484,13.9777249780371,29.8083372415597,36.6000482254901,26.5130682958144,26.5951209894183,20.7129520437568,29.0903262383384,23.3627418817571,16.4979769437512,43.6668466841426,17.4378703319236,37.4586503477924,31.4891471969743,29.8872735763515,39.6136685571768,39.9367767264645,38.0324030255923,51.6298292747945,49.9430191903355,64.1584359432759,38.5866707349788,42.3597619575915,39.9409051852164,27.1802708210193,40.3168511377117,54.327337977458,63.1751158772386,16.3208098791164,14.0442637462647,17.7570055909153,13.6398479709884,28.3762308373638,29.315757497637,27.1893712806132,28.8828577413957,29.1211062986158,28.6936829970524,25.5787339225449,27.0956135413615,19.4998121753173,17.7724637906559,16.7450813360677,20.2672023864639,17.2515985161892,20.1986106067767,17.8494536951294,23.5524742391823,39.0008480917488,388.90290757193,174.008472864612,16.2099070406778,20.9013004674395,22.8095406540105,33.0760980382282,48.4784135581817,59.7308465993436,109.141684155238,92.7255115096181,93.7480328825005,95.6980630517935,108.984924699588,109.655967855815,91.6425331468703,91.2067031505002,26.7431740343845,18.3940105301663,29.3040112750009,21.7906920794486,19.9771061782655,17.0430042333474,14.4811670014549,10.9231509504906,13.3448918665169,11.8461277364928,7.11486305009157,27.6962875488716,23.7836384086976,24.2851081375642,41.7891850060316,37.1412826018722,37.4300002118687,48.9083433666378,31.4542339943569,17.0228076176611,18.6898668485561,8.55924179637558,6.55279113540577,5.80931419278357,9.86685774370517,9.64887042726734,14.2259956428286,18.759649765278,17.1113225264127,17.9929790921699,16.4283173801951,22.7808510120869,23.0902331659433,19.7084984336377,21.438379598442,22.589398344175,18.1778436269535,17.6972379892997,13.9874835311375,13.8863096238251,10.5553898757491,3.26343410291226,35.4070276573706,13.5209005689319,27.1330497079368,27.4275346625755,18.5246488275643,17.4204939771017,32.8128548192907,32.406415776621,43.946373137491,35.6063508949303,43.4457414460669,55.4830000346112,35.6233417473907,42.9616111129628,52.5732744668876,55.5885877409726,24.2717545706139,23.3265940804104,21.501078634672,24.7455184458803,9.2921596837974,18.2085477116236,10.5813244937663,11.127699705598,13.2885851796348,18.7535440245796,33.5956781118688,11.9966130727577,7.84294232446387,7.58488219045958,4.21674434299995,8.25084345985495,24.5116516142727,32.9511802077298,49.544375888795,62.8007512642565,68.8080106532021,45.1273108533239,36.0362355118645,28.3152402676577,38.4861601224485,46.3912235191766,19.8475558249466,96.7882304766488,71.2058121728943,52.8944351619927,64.2223210736874,65.4922189982794,84.2379617860269,27.8137953015765,54.1660692129193,19.4003655885429,34.075793036027,88.1564378781954,58.9152121477618,58.1096559944568,24.4768939191152,22.112329467138,29.021994498929,48.6882015187708,20.403671585983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| |||
|short_description=p1@Mxi1 | |||
}} | |||
Revision as of 18:01, 13 September 2013
| Short description: | p1@Mxi1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Mxi1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:163 |
| Association with transcript: | 0bp_to_ENSMUST00000003870, NM_001008542, uc008hwo.1_5end |
| EntrezGene: | Mxi1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 9.98e-09 | 47 |
| intestine | 2.33e-08 | 31 |
| ectoderm-derived structure | 5.60e-08 | 95 |
| ectoderm | 5.60e-08 | 95 |
| presumptive ectoderm | 5.60e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
