FFCP PHASE1:Hg19::chr6:142623032..142623043,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57211|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13841|TSSclassifier=S|UniProt=Q86SQ4|association_with_transcript=-12bp_to_NM_001032394,NM_001032395,NM_020455,NM_198569,uc003qix.2,uc010khc.2,uc010khd.2,uc010khe.2,uc010khf.2_5end|coexpression_cluster_id=C181|description=CAGE_peak_4_at_GPR126_5end|id=chr6:142623032..142623043,+|ontology_enrichment_celltype=CL:0000066!1.36e-37!254;CL:1000497!1.86e-09!18;CL:0002518!1.86e-09!18;CL:0000223!1.94e-09!59;CL:1000449!4.28e-08!16;CL:0000220!1.91e-07!246;CL:0002321!2.49e-07!248;CL:1000507!5.31e-07!12;CL:1000494!5.31e-07!12;CL:0000076!9.75e-07!62|ontology_enrichment_celltype_v019=CL:1000497;1.22e-08;17!CL:0002518;1.22e-08;17!CL:0000182;1.72e-07;12!CL:0002618;2.96e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,4.57e-18,253;CL:1000497,1.28e-08,17;CL:0002518,1.28e-08,17;CL:0000223,1.38e-08,58;CL:0000182,1.68e-07,12;CL:0002618,2.24e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.83e-18!106;DOID:0050687!3.66e-15!143;DOID:14566!6.54e-10!239;DOID:162!1.32e-09!235|ontology_enrichment_disease_v019=DOID:7;3.61e-08;39|ontology_enrichment_disease_v019_2=DOID:7,2.14e-09,39;DOID:0050687,2.18e-09,143;DOID:305,6.61e-09,106|ontology_enrichment_uberon=UBERON:0004119!8.66e-15!169;UBERON:0000925!8.66e-15!169;UBERON:0006595!8.66e-15!169;UBERON:0004921!1.89e-13!129;UBERON:0004185!1.89e-13!129;UBERON:0001007!2.44e-12!155;UBERON:0001555!2.44e-12!155;UBERON:0007026!2.44e-12!155;UBERON:0000466!4.76e-12!126;UBERON:0005177!1.10e-11!107;UBERON:0005911!1.15e-10!82;UBERON:0005172!1.44e-10!55;UBERON:0005173!1.44e-10!55;UBERON:0000077!1.81e-10!130;UBERON:0000481!5.34e-10!347;UBERON:0006554!3.14e-09!44;UBERON:0009569!3.87e-09!113;UBERON:0001041!5.22e-09!98;UBERON:0001008!9.63e-09!45;UBERON:0002417!1.44e-08!61;UBERON:0000916!1.44e-08!61;UBERON:0000464!1.51e-08!104;UBERON:0003104!1.56e-08!238;UBERON:0009142!1.56e-08!238;UBERON:0003064!2.16e-08!37;UBERON:0000475!3.21e-08!365;UBERON:0000483!4.24e-08!309;UBERON:0004211!4.28e-08!16;UBERON:0001285!4.28e-08!16;UBERON:0007684!4.28e-08!16;UBERON:0003220!4.28e-08!16;UBERON:0004208!4.28e-08!16;UBERON:0000119!7.78e-08!312;UBERON:0001048!9.03e-08!168;UBERON:0000058!9.22e-08!26;UBERON:0000489!1.95e-07!32;UBERON:0001851!2.23e-07!16;UBERON:0006555!3.00e-07!17;UBERON:0005103!3.00e-07!17;UBERON:0000083!3.00e-07!17;UBERON:0009201!3.00e-07!17;UBERON:0004819!3.00e-07!17;UBERON:0006553!3.00e-07!17;UBERON:0003074!3.00e-07!17;UBERON:0003060!3.00e-07!17;UBERON:0005153!3.88e-07!37;UBERON:0000064!4.43e-07!219;UBERON:0002113!4.90e-07!27;UBERON:0003918!4.90e-07!27;UBERON:0005095!4.90e-07!27;UBERON:0007687!4.90e-07!27;UBERON:0009773!5.31e-07!12;UBERON:0001231!5.31e-07!12;UBERON:0004810!5.31e-07!12;UBERON:0000062!6.52e-07!511;UBERON:0000065!9.15e-07!53|ontology_enrichment_uberon_v019=UBERON:0002365;5.08e-08;31!UBERON:0002330;5.08e-08;31!UBERON:0002423;1.35e-07;25!UBERON:0002107;3.13e-07;19!UBERON:0006925;3.13e-07;19!UBERON:0002417;3.66e-07;58!UBERON:0000916;3.66e-07;58!UBERON:0005172;4.66e-07;52!UBERON:0005173;4.66e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.67e-10,160;UBERON:0000925,2.67e-10,160;UBERON:0006595,2.67e-10,160;UBERON:0005172,3.55e-10,54;UBERON:0005173,3.55e-10,54;UBERON:0002417,1.21e-08,60;UBERON:0000916,1.21e-08,60;UBERON:0005177,3.18e-08,101;UBERON:0002365,6.59e-08,31;UBERON:0002330,6.59e-08,31;UBERON:0001007,8.98e-08,145;UBERON:0001555,8.98e-08,145;UBERON:0007026,8.98e-08,145;UBERON:0004921,1.25e-07,118;UBERON:0009569,1.89e-07,112;UBERON:0007499,2.27e-07,25;UBERON:0009497,2.47e-07,25;UBERON:0000015,2.47e-07,25;UBERON:0002423,2.47e-07,25;UBERON:0006235,2.47e-07,25;UBERON:0004161,2.47e-07,25;UBERON:0008835,3.11e-07,22;UBERON:0003894,3.11e-07,22;UBERON:0002107,3.49e-07,19;UBERON:0006925,3.49e-07,19;UBERON:0008836,3.49e-07,19;UBERON:0009856,5.37e-07,26;UBERON:0009854,7.89e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,1.74753097704138,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,0,0,0,0,0.661743720148475,1.33037638477538,0.966182642624386,0.589405839739707,0.728590576585084,1.11235332835329,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0.550236083880135,0,0.775250277507987,1.42306505074684,0.66944122552934,0,0,0,0,0.81014194788176,1.60739510911344,2.02076435363553,2.70267553159973,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0.404132016209064,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0.10305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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13841 | |||
|TSSclassifier=S | |||
|UniProt=Q86SQ4 | |||
|association_with_transcript=-12bp_to_NM_001032394,NM_001032395,NM_020455,NM_198569,uc003qix.2,uc010khc.2,uc010khd.2,uc010khe.2,uc010khf.2_5end | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_4_at_GPR126_5end | |||
|id=chr6:142623032..142623043,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-37!254;CL:1000497!1.86e-09!18;CL:0002518!1.86e-09!18;CL:0000223!1.94e-09!59;CL:1000449!4.28e-08!16;CL:0000220!1.91e-07!246;CL:0002321!2.49e-07!248;CL:1000507!5.31e-07!12;CL:1000494!5.31e-07!12;CL:0000076!9.75e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.22e-08;17!CL:0002518;1.22e-08;17!CL:0000182;1.72e-07;12!CL:0002618;2.96e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.57e-18,253;CL:1000497,1.28e-08,17;CL:0002518,1.28e-08,17;CL:0000223,1.38e-08,58;CL:0000182,1.68e-07,12;CL:0002618,2.24e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.83e-18!106;DOID:0050687!3.66e-15!143;DOID:14566!6.54e-10!239;DOID:162!1.32e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:7;3.61e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.14e-09,39;DOID:0050687,2.18e-09,143;DOID:305,6.61e-09,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002365;5.08e-08;31!UBERON:0002330;5.08e-08;31!UBERON:0002423;1.35e-07;25!UBERON:0002107;3.13e-07;19!UBERON:0006925;3.13e-07;19!UBERON:0002417;3.66e-07;58!UBERON:0000916;3.66e-07;58!UBERON:0005172;4.66e-07;52!UBERON:0005173;4.66e-07;52 | |||
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| |||
|short_description=p4@GPR126 | |||
}} |
Revision as of 18:26, 13 September 2013
Short description: | p4@GPR126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GPR126_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | -12bp_to_NM_001032394, NM_001032395, NM_020455, NM_198569, uc003qix.2, uc010khc.2, uc010khd.2, uc010khe.2, uc010khf.2_5end |
EntrezGene: | GPR126 |
HGNC: | 13841 |
UniProt: | Q86SQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.57e-18 | 253 |
kidney cell | 1.28e-08 | 17 |
kidney epithelial cell | 1.28e-08 | 17 |
endodermal cell | 1.38e-08 | 58 |
hepatocyte | 1.68e-07 | 12 |
endothelial cell of umbilical vein | 2.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.67e-10 | 160 |
endoderm | 2.67e-10 | 160 |
presumptive endoderm | 2.67e-10 | 160 |
abdomen element | 3.55e-10 | 54 |
abdominal segment element | 3.55e-10 | 54 |
abdominal segment of trunk | 1.21e-08 | 60 |
abdomen | 1.21e-08 | 60 |
trunk region element | 3.18e-08 | 101 |
exocrine gland | 6.59e-08 | 31 |
exocrine system | 6.59e-08 | 31 |
digestive system | 8.98e-08 | 145 |
digestive tract | 8.98e-08 | 145 |
primitive gut | 8.98e-08 | 145 |
subdivision of digestive tract | 1.25e-07 | 118 |
subdivision of trunk | 1.89e-07 | 112 |
epithelial sac | 2.27e-07 | 25 |
epithelium of foregut-midgut junction | 2.47e-07 | 25 |
anatomical boundary | 2.47e-07 | 25 |
hepatobiliary system | 2.47e-07 | 25 |
foregut-midgut junction | 2.47e-07 | 25 |
septum transversum | 2.47e-07 | 25 |
hepatic diverticulum | 3.11e-07 | 22 |
liver primordium | 3.11e-07 | 22 |
liver | 3.49e-07 | 19 |
digestive gland | 3.49e-07 | 19 |
liver bud | 3.49e-07 | 19 |
sac | 5.37e-07 | 26 |
digestive tract diverticulum | 7.89e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.14e-09 | 39 |
cell type cancer | 2.18e-09 | 143 |
carcinoma | 6.61e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.