FFCP PHASE1:Mm9::chr19:8788884..8788904,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17254|HGNC=|MCL_coexpression_id=148|UniProt=P10852|association_with_transcript=-497bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end|description=CAGE_peak_11_at_Slc3a2_5end|id=chr19:8788884..8788904,-|ontology_enrichment_celltype=CL:0000333!4.90e-21!10;CL:0000095!4.90e-21!10;CL:0000243!4.90e-21!10;CL:0000123!4.90e-21!10;CL:0000125!4.90e-21!10;CL:0000030!4.90e-21!10;CL:0000339!4.90e-21!10;CL:0002453!5.39e-21!8;CL:0000128!1.02e-14!6;CL:0000126!1.02e-14!6;CL:0000127!1.02e-14!6;CL:0002604!2.68e-08!2;CL:0002605!2.68e-08!2;CL:0000864!5.02e-08!2;CL:0000878!5.02e-08!2;CL:0000129!5.02e-08!2;CL:0000708!2.11e-07!2|ontology_enrichment_celltype_v019_2=CL:0002453,1.26e-36,8;CL:0000333,2.62e-29,10;CL:0000095,2.62e-29,10;CL:0000243,2.62e-29,10;CL:0000123,2.62e-29,10;CL:0000125,2.62e-29,10;CL:0000030,2.62e-29,10;CL:0000339,2.62e-29,10;CL:0000128,2.11e-22,6;CL:0000126,2.11e-22,6;CL:0000127,2.11e-22,6;CL:0002605,1.07e-17,2;CL:0002604,1.07e-17,2;CL:0000878,4.76e-17,2;CL:0000129,4.76e-17,2;CL:0002194,5.31e-09,4;CL:0000766,5.31e-09,4;CL:0000234,5.31e-09,4;CL:0000576,5.31e-09,4;CL:0000235,5.31e-09,4;CL:0000864,5.31e-09,4;CL:0002009,5.31e-09,4;CL:0000040,5.31e-09,4;CL:0000559,5.31e-09,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.34e-28!9;UBERON:0000019!2.34e-28!9;UBERON:0000047!2.34e-28!9;UBERON:0004088!2.34e-28!9;UBERON:0002104!2.34e-28!9;UBERON:0001456!2.34e-28!9;UBERON:0003072!2.34e-28!9;UBERON:0003071!2.34e-28!9;UBERON:0004128!2.34e-28!9;UBERON:0001444!6.24e-23!11;UBERON:0000020!6.77e-21!12;UBERON:0001032!6.77e-21!12;UBERON:0004456!6.77e-21!12;UBERON:0005085!3.58e-19!13;UBERON:0003056!4.66e-12!49;UBERON:0004121!3.27e-10!102;UBERON:0000924!3.27e-10!102;UBERON:0006601!3.27e-10!102;UBERON:0000033!3.48e-10!63;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71;UBERON:0003210!2.11e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.28e-21,9;UBERON:0000019,1.28e-21,9;UBERON:0000047,1.28e-21,9;UBERON:0010312,1.28e-21,9;UBERON:0004088,1.28e-21,9;UBERON:0002104,1.28e-21,9;UBERON:0001456,1.28e-21,9;UBERON:0003072,1.28e-21,9;UBERON:0004128,1.28e-21,9;UBERON:0003071,1.28e-21,9;UBERON:0001444,1.01e-17,11;UBERON:0000020,2.93e-16,12;UBERON:0001032,2.93e-16,12;UBERON:0004456,2.93e-16,12;UBERON:0000033,5.09e-15,13;UBERON:0005085,5.09e-15,13;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0003056,1.39e-07,49;UBERON:0002346,1.84e-07,64;UBERON:0003075,1.84e-07,64;UBERON:0007284,1.84e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1192829754028,22.4079906389161,19.6374198065026,0.839918529752175,8.62515386189829,0,0,0,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,2.09720077362883,2.68952813725088,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.780722657776222,1.37941262660084,1.62055916824814,0.60281927134286,1.56483948048054,0.896796041993948,1.12442069471675,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@Slc3a2}} | ||
|EntrezGene=17254 | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=P10852 | |||
|association_with_transcript=-497bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end | |||
|description=CAGE_peak_11_at_Slc3a2_5end | |||
|id=chr19:8788884..8788904,- | |||
|ontology_enrichment_celltype=CL:0000333!4.90e-21!10;CL:0000095!4.90e-21!10;CL:0000243!4.90e-21!10;CL:0000123!4.90e-21!10;CL:0000125!4.90e-21!10;CL:0000030!4.90e-21!10;CL:0000339!4.90e-21!10;CL:0002453!5.39e-21!8;CL:0000128!1.02e-14!6;CL:0000126!1.02e-14!6;CL:0000127!1.02e-14!6;CL:0002604!2.68e-08!2;CL:0002605!2.68e-08!2;CL:0000864!5.02e-08!2;CL:0000878!5.02e-08!2;CL:0000129!5.02e-08!2;CL:0000708!2.11e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.26e-36,8;CL:0000333,2.62e-29,10;CL:0000095,2.62e-29,10;CL:0000243,2.62e-29,10;CL:0000123,2.62e-29,10;CL:0000125,2.62e-29,10;CL:0000030,2.62e-29,10;CL:0000339,2.62e-29,10;CL:0000128,2.11e-22,6;CL:0000126,2.11e-22,6;CL:0000127,2.11e-22,6;CL:0002605,1.07e-17,2;CL:0002604,1.07e-17,2;CL:0000878,4.76e-17,2;CL:0000129,4.76e-17,2;CL:0002194,5.31e-09,4;CL:0000766,5.31e-09,4;CL:0000234,5.31e-09,4;CL:0000576,5.31e-09,4;CL:0000235,5.31e-09,4;CL:0000864,5.31e-09,4;CL:0002009,5.31e-09,4;CL:0000040,5.31e-09,4;CL:0000559,5.31e-09,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.34e-28!9;UBERON:0000019!2.34e-28!9;UBERON:0000047!2.34e-28!9;UBERON:0004088!2.34e-28!9;UBERON:0002104!2.34e-28!9;UBERON:0001456!2.34e-28!9;UBERON:0003072!2.34e-28!9;UBERON:0003071!2.34e-28!9;UBERON:0004128!2.34e-28!9;UBERON:0001444!6.24e-23!11;UBERON:0000020!6.77e-21!12;UBERON:0001032!6.77e-21!12;UBERON:0004456!6.77e-21!12;UBERON:0005085!3.58e-19!13;UBERON:0003056!4.66e-12!49;UBERON:0004121!3.27e-10!102;UBERON:0000924!3.27e-10!102;UBERON:0006601!3.27e-10!102;UBERON:0000033!3.48e-10!63;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71;UBERON:0003210!2.11e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.28e-21,9;UBERON:0000019,1.28e-21,9;UBERON:0000047,1.28e-21,9;UBERON:0010312,1.28e-21,9;UBERON:0004088,1.28e-21,9;UBERON:0002104,1.28e-21,9;UBERON:0001456,1.28e-21,9;UBERON:0003072,1.28e-21,9;UBERON:0004128,1.28e-21,9;UBERON:0003071,1.28e-21,9;UBERON:0001444,1.01e-17,11;UBERON:0000020,2.93e-16,12;UBERON:0001032,2.93e-16,12;UBERON:0004456,2.93e-16,12;UBERON:0000033,5.09e-15,13;UBERON:0005085,5.09e-15,13;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0003056,1.39e-07,49;UBERON:0002346,1.84e-07,64;UBERON:0003075,1.84e-07,64;UBERON:0007284,1.84e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1192829754028,22.4079906389161,19.6374198065026,0.839918529752175,8.62515386189829,0,0,0,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,2.09720077362883,2.68952813725088,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0.780722657776222,1.37941262660084,1.62055916824814,0.60281927134286,1.56483948048054,0.896796041993948,1.12442069471675,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@Slc3a2 | |||
}} |
Revision as of 18:27, 13 September 2013
Short description: | p11@Slc3a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Slc3a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | -497bp_to_ENSMUST00000010239, NM_008577, uc012bib.1_5end |
EntrezGene: | Slc3a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.26e-36 | 8 |
migratory neural crest cell | 2.62e-29 | 10 |
neuron associated cell | 2.62e-29 | 10 |
glial cell (sensu Vertebrata) | 2.62e-29 | 10 |
neuron associated cell (sensu Vertebrata) | 2.62e-29 | 10 |
glial cell | 2.62e-29 | 10 |
glioblast | 2.62e-29 | 10 |
glioblast (sensu Vertebrata) | 2.62e-29 | 10 |
oligodendrocyte | 2.11e-22 | 6 |
macroglial cell | 2.11e-22 | 6 |
astrocyte | 2.11e-22 | 6 |
astrocyte of the cerebral cortex | 1.07e-17 | 2 |
astrocyte of the hippocampus | 1.07e-17 | 2 |
central nervous system macrophage | 4.76e-17 | 2 |
microglial cell | 4.76e-17 | 2 |
monopoietic cell | 5.31e-09 | 4 |
myeloid leukocyte | 5.31e-09 | 4 |
phagocyte | 5.31e-09 | 4 |
monocyte | 5.31e-09 | 4 |
macrophage | 5.31e-09 | 4 |
tissue-resident macrophage | 5.31e-09 | 4 |
macrophage dendritic cell progenitor | 5.31e-09 | 4 |
monoblast | 5.31e-09 | 4 |
promonocyte | 5.31e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
eye | 1.28e-21 | 9 |
camera-type eye | 1.28e-21 | 9 |
simple eye | 1.28e-21 | 9 |
immature eye | 1.28e-21 | 9 |
ocular region | 1.28e-21 | 9 |
visual system | 1.28e-21 | 9 |
face | 1.28e-21 | 9 |
optic cup | 1.28e-21 | 9 |
optic vesicle | 1.28e-21 | 9 |
eye primordium | 1.28e-21 | 9 |
subdivision of head | 1.01e-17 | 11 |
sense organ | 2.93e-16 | 12 |
sensory system | 2.93e-16 | 12 |
entire sense organ system | 2.93e-16 | 12 |
head | 5.09e-15 | 13 |
ectodermal placode | 5.09e-15 | 13 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
pre-chordal neural plate | 1.39e-07 | 49 |
neurectoderm | 1.84e-07 | 64 |
neural plate | 1.84e-07 | 64 |
presumptive neural plate | 1.84e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.