FFCP PHASE1:Mm9::chr1:10223128..10223174,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=211673|HGNC=|UniProt=G3X9K3,D3YYK9|association_with_transcript=-377bp_to_ENSMUST00000088615,ENSMUST00000131556,NM_001102430,uc007ahn.1_5end|description=CAGE_peak_2_at_Arfgef1_5end|id=chr1:10223128..10223174,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.46e-09!51;UBERON:0005409!6.18e-08!59;UBERON:0000160!7.92e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.46e-09,51|phase1_expression=14.0930985452219,28.2670080187882,24.1149596876454,32.6661348211376,29.5528480668345,15.9485308316295,11.2134067485852,8.52213934714403,8.024957162645,10.0647746318457,9.07455231595176,11.8062795313098,8.04643430676667,7.86783621770977,17.3217076144145,13.970793449898,6.29605690315332,10.2525203741427,13.5743289269681,8.48779303596061,19.9851731855014,9.23405846168233,4.96279599363977,12.9593862462659,11.6998733344257,17.8011908875656,17.6612418425221,16.8067561494993,18.4322716872683,23.9428623271934,10.199603490144,12.7006134691926,3.69038872550742,15.8481681015439,13.5760261283099,13.6312409193964,14.9043630071529,24.2748345827406,9.37602413428561,18.8468547830567,27.6468799374577,30.7370468231301,29.6161315349004,17.2478640626541,18.7547322756102,17.0698479510364,6.25913075478431,1.96222640742402,2.85592037554813,2.52758868796568,2.51975558925653,5.75010257459886,8.38913030288682,7.25362142011344,10.0828139742739,9.51859913333004,9.74213695791773,10.3134418455488,7.68802551266472,5.28990979272033,6.33831403506179,3.72728985276045,6.22506357277798,2.2497492932035,4.94433181283487,3.5524005747305,2.99600110518405,5.37905627450176,8.91730665852908,6.75029691658453,4.83747411108179,7.7125765789027,6.40518768759679,9.67677313798137,3.73797336971122,4.5960939330501,14.3150645299205,20.1745994174597,18.5863905240055,8.5726087024626,4.57438218012048,7.8137005583514,10.3297709630511,13.5063026407603,15.279824777681,18.2669722993674,17.5117167382897,14.911955666024,10.7531194533121,12.5448789777264,13.9134954576805,15.487629785665,6.79971333707751,14.0322829825832,22.7421746106684,23.7454250161588,16.0106638950197,9.88495870952735,3.11743205523443,8.12681021373782,15.3519327556582,20.5322363862909,22.9324715735981,35.5533351576666,6.92771331235885,11.4011939463794,8.59391556525132,27.2899472528553,8.2860122767095,21.0787837472051,8.67426633830679,11.5696881758614,10.1470818792666,9.19408107370998,16.4624189989987,12.8179923156269,33.8657105796092,14.1707369781513,20.3460426948471,16.5002186946357,17.2256384399107,13.5765070877862,11.1835056730873,16.1029438356351,18.2218634927706,32.4430460114911,11.5022519525683,1.19980546198682,7.37007317023775,16.4769703345305,16.0125210986519,12.4397808591736,18.5992022605736,19.9458056717658,18.7009240103604,17.0353326221146,18.8402823123085,19.7807083270048,21.9868799837297,24.2008134269445,12.8819238533077,10.8053989083732,14.4049703844279,12.9606143338715,22.6561542173922,17.935920839879,19.3025552593041,25.8703370739016,8.191583731448,16.6413350547681,14.7798944297717,15.7820927347854,16.1267404550847,21.9398864908965,20.5782136407943,18.3111525473014,4.21327912387941,3.86021860672073,4.26245249093389,18.8484453007307,13.8370375388847,12.244220179349,13.9679393995274,12.7896750635812,10.9529650150039,10.6965614585188,11.8040296615832,16.1136172466694,11.5191894939436,12.6408947340903,19.9429271482805,17.1053985287639,17.124908992702,19.4599307202539,17.8746456279508,11.5253165864799,49.2323986645859,41.5187389661764,11.7308537794379,14.3986736553472,21.7786009634338,26.2188582010345,20.6811580775729,26.4413620296457,27.9972146311262,23.0578536613615,27.6468729680296,30.4403402222961,27.2949721966768,34.1551375288604,33.7175357804523,32.6591688137162,6.2590407314517,11.6533482861923,11.270773567308,14.255592949172,14.3524840504043,21.1108817869859,26.3696359808153,30.5553006317776,23.0788129926821,23.5688583090639,16.008441862706,19.3540322630669,23.3905204184712,17.9889689907883,20.4888722602388,17.364755502174,12.731292589071,18.7002489343027,28.0493942320811,12.6298250066517,86.2609239164127,14.8856379067401,12.4815069245824,14.3969960429854,15.6075749764064,13.9908621195376,25.3111870528248,13.0749074121634,16.4594626206446,15.2770577197669,14.5507953938871,21.4408009525524,19.5195785526531,25.3673742215138,20.9654741661234,14.6166695168191,20.7291199254733,16.3863314715738,17.0958132047237,15.7667473853848,3.01582567878545,9.24639662491806,23.6046851049137,22.9027499432928,18.1422166686205,19.9259867206745,17.3771042099276,16.1581393410799,12.9358369960665,8.19921363022941,13.3562506594335,10.0366895140072,13.3679204449436,20.3815102167959,10.1202675418724,19.2888866221466,15.0209355619679,21.8498495166829,24.4136946558222,12.8207234640424,22.4784003907935,23.095817216155,31.8588332015911,10.4395673546642,15.1161778482376,16.597247018519,15.0603965369194,22.4427657999067,19.6405502807848,18.9037539328303,21.746340081468,22.43860981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| ||
|EntrezGene=211673 | |||
|HGNC= | |||
|UniProt=G3X9K3,D3YYK9 | |||
|association_with_transcript=-377bp_to_ENSMUST00000088615,ENSMUST00000131556,NM_001102430,uc007ahn.1_5end | |||
|description=CAGE_peak_2_at_Arfgef1_5end | |||
|id=chr1:10223128..10223174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-09!51;UBERON:0005409!6.18e-08!59;UBERON:0000160!7.92e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.46e-09,51 | |||
|phase1_expression=14.0930985452219,28.2670080187882,24.1149596876454,32.6661348211376,29.5528480668345,15.9485308316295,11.2134067485852,8.52213934714403,8.024957162645,10.0647746318457,9.07455231595176,11.8062795313098,8.04643430676667,7.86783621770977,17.3217076144145,13.970793449898,6.29605690315332,10.2525203741427,13.5743289269681,8.48779303596061,19.9851731855014,9.23405846168233,4.96279599363977,12.9593862462659,11.6998733344257,17.8011908875656,17.6612418425221,16.8067561494993,18.4322716872683,23.9428623271934,10.199603490144,12.7006134691926,3.69038872550742,15.8481681015439,13.5760261283099,13.6312409193964,14.9043630071529,24.2748345827406,9.37602413428561,18.8468547830567,27.6468799374577,30.7370468231301,29.6161315349004,17.2478640626541,18.7547322756102,17.0698479510364,6.25913075478431,1.96222640742402,2.85592037554813,2.52758868796568,2.51975558925653,5.75010257459886,8.38913030288682,7.25362142011344,10.0828139742739,9.51859913333004,9.74213695791773,10.3134418455488,7.68802551266472,5.28990979272033,6.33831403506179,3.72728985276045,6.22506357277798,2.2497492932035,4.94433181283487,3.5524005747305,2.99600110518405,5.37905627450176,8.91730665852908,6.75029691658453,4.83747411108179,7.7125765789027,6.40518768759679,9.67677313798137,3.73797336971122,4.5960939330501,14.3150645299205,20.1745994174597,18.5863905240055,8.5726087024626,4.57438218012048,7.8137005583514,10.3297709630511,13.5063026407603,15.279824777681,18.2669722993674,17.5117167382897,14.911955666024,10.7531194533121,12.5448789777264,13.9134954576805,15.487629785665,6.79971333707751,14.0322829825832,22.7421746106684,23.7454250161588,16.0106638950197,9.88495870952735,3.11743205523443,8.12681021373782,15.3519327556582,20.5322363862909,22.9324715735981,35.5533351576666,6.92771331235885,11.4011939463794,8.59391556525132,27.2899472528553,8.2860122767095,21.0787837472051,8.67426633830679,11.5696881758614,10.1470818792666,9.19408107370998,16.4624189989987,12.8179923156269,33.8657105796092,14.1707369781513,20.3460426948471,16.5002186946357,17.2256384399107,13.5765070877862,11.1835056730873,16.1029438356351,18.2218634927706,32.4430460114911,11.5022519525683,1.19980546198682,7.37007317023775,16.4769703345305,16.0125210986519,12.4397808591736,18.5992022605736,19.9458056717658,18.7009240103604,17.0353326221146,18.8402823123085,19.7807083270048,21.9868799837297,24.2008134269445,12.8819238533077,10.8053989083732,14.4049703844279,12.9606143338715,22.6561542173922,17.935920839879,19.3025552593041,25.8703370739016,8.191583731448,16.6413350547681,14.7798944297717,15.7820927347854,16.1267404550847,21.9398864908965,20.5782136407943,18.3111525473014,4.21327912387941,3.86021860672073,4.26245249093389,18.8484453007307,13.8370375388847,12.244220179349,13.9679393995274,12.7896750635812,10.9529650150039,10.6965614585188,11.8040296615832,16.1136172466694,11.5191894939436,12.6408947340903,19.9429271482805,17.1053985287639,17.124908992702,19.4599307202539,17.8746456279508,11.5253165864799,49.2323986645859,41.5187389661764,11.7308537794379,14.3986736553472,21.7786009634338,26.2188582010345,20.6811580775729,26.4413620296457,27.9972146311262,23.0578536613615,27.6468729680296,30.4403402222961,27.2949721966768,34.1551375288604,33.7175357804523,32.6591688137162,6.2590407314517,11.6533482861923,11.270773567308,14.255592949172,14.3524840504043,21.1108817869859,26.3696359808153,30.5553006317776,23.0788129926821,23.5688583090639,16.008441862706,19.3540322630669,23.3905204184712,17.9889689907883,20.4888722602388,17.364755502174,12.731292589071,18.7002489343027,28.0493942320811,12.6298250066517,86.2609239164127,14.8856379067401,12.4815069245824,14.3969960429854,15.6075749764064,13.9908621195376,25.3111870528248,13.0749074121634,16.4594626206446,15.2770577197669,14.5507953938871,21.4408009525524,19.5195785526531,25.3673742215138,20.9654741661234,14.6166695168191,20.7291199254733,16.3863314715738,17.0958132047237,15.7667473853848,3.01582567878545,9.24639662491806,23.6046851049137,22.9027499432928,18.1422166686205,19.9259867206745,17.3771042099276,16.1581393410799,12.9358369960665,8.19921363022941,13.3562506594335,10.0366895140072,13.3679204449436,20.3815102167959,10.1202675418724,19.2888866221466,15.0209355619679,21.8498495166829,24.4136946558222,12.8207234640424,22.4784003907935,23.095817216155,31.8588332015911,10.4395673546642,15.1161778482376,16.597247018519,15.0603965369194,22.4427657999067,19.6405502807848,18.9037539328303,21.746340081468,22.4386098134429,27.4088382294997,24.7525303795648,20.7668159509811,11.3438489239725,3.75140182969988,13.0745591369271,16.3153014950892,13.3776613201553,13.9866667511803,8.82948352432338,29.5686352160275,34.5286275508027,35.5050720868489,29.3497530235834,26.4801659781285,26.9598774428857,21.4870219205646,29.7095028538561,34.6862195589522,22.0656109392507,20.1627639341466,13.8279201535359,13.1488114432495,17.3298980444316,22.4178533462481,16.0144721244566,11.3885548095883,8.6769900440668,9.81219814011409,8.59203556213602,18.980159614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| |||
|short_description=p2@Arfgef1 | |||
}} | |||
Revision as of 18:31, 13 September 2013
| Short description: | p2@Arfgef1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Arfgef1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -377bp_to_ENSMUST00000088615, ENSMUST00000131556, NM_001102430, uc007ahn.1_5end |
| EntrezGene: | Arfgef1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.46e-09 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
