FFCP PHASE1:Mm9::chr1:107054473..107054482,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:107054473..107054482,-|id=chr1:107054473..107054482,-|ontology_enrichment_celltype=CL:0002563!5.49e-09!9;CL:0002251!5.49e-09!9;CL:0000239!4.32e-08!6;CL:0000677!4.32e-08!6;CL:0000212!4.32e-08!6;CL:0000584!4.32e-08!6;CL:0000075!5.34e-07!7|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-08,6;CL:0000677,3.71e-08,6;CL:0000584,3.71e-08,6;CL:0000075,4.05e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001242!1.95e-18!13;UBERON:0000060!1.95e-18!13;UBERON:0001262!1.95e-18!13;UBERON:0004786!1.95e-18!13;UBERON:0000344!6.87e-16!15;UBERON:0000160!3.59e-15!43;UBERON:0005409!1.39e-12!59;UBERON:0004923!1.15e-09!24;UBERON:0003350!5.49e-09!9;UBERON:0004808!5.49e-09!9;UBERON:0001277!5.49e-09!9;UBERON:0000331!7.17e-08!3;UBERON:0002116!7.17e-08!3;UBERON:0001204!7.17e-08!3;UBERON:0001168!7.17e-08!3;UBERON:0000485!2.23e-07!11;UBERON:0004921!9.01e-07!126;UBERON:0004185!9.01e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.88e-21,13;UBERON:0001262,2.88e-21,13;UBERON:0004786,2.88e-21,13;UBERON:0000344,1.77e-18,15;UBERON:0000160,2.46e-17,31;UBERON:0000331,1.46e-15,3;UBERON:0002116,1.46e-15,3;UBERON:0001204,1.46e-15,3;UBERON:0001168,1.46e-15,3;UBERON:0005409,7.01e-15,47;UBERON:0002108,6.31e-12,4;UBERON:0004923,1.18e-11,24;UBERON:0001155,7.59e-07,2;UBERON:0000059,7.59e-07,2|phase1_expression=0,0,0.454999239389536,1.81478526784098,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430942465371778,1.90023419456374,2.77233142735924,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.648414149624083,1.99141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:107054473..107054482,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:107054473..107054482,- | |||
|id=chr1:107054473..107054482,- | |||
|ontology_enrichment_celltype=CL:0002563!5.49e-09!9;CL:0002251!5.49e-09!9;CL:0000239!4.32e-08!6;CL:0000677!4.32e-08!6;CL:0000212!4.32e-08!6;CL:0000584!4.32e-08!6;CL:0000075!5.34e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.71e-08,6;CL:0000677,3.71e-08,6;CL:0000584,3.71e-08,6;CL:0000075,4.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!1.95e-18!13;UBERON:0000060!1.95e-18!13;UBERON:0001262!1.95e-18!13;UBERON:0004786!1.95e-18!13;UBERON:0000344!6.87e-16!15;UBERON:0000160!3.59e-15!43;UBERON:0005409!1.39e-12!59;UBERON:0004923!1.15e-09!24;UBERON:0003350!5.49e-09!9;UBERON:0004808!5.49e-09!9;UBERON:0001277!5.49e-09!9;UBERON:0000331!7.17e-08!3;UBERON:0002116!7.17e-08!3;UBERON:0001204!7.17e-08!3;UBERON:0001168!7.17e-08!3;UBERON:0000485!2.23e-07!11;UBERON:0004921!9.01e-07!126;UBERON:0004185!9.01e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.88e-21,13;UBERON:0001262,2.88e-21,13;UBERON:0004786,2.88e-21,13;UBERON:0000344,1.77e-18,15;UBERON:0000160,2.46e-17,31;UBERON:0000331,1.46e-15,3;UBERON:0002116,1.46e-15,3;UBERON:0001204,1.46e-15,3;UBERON:0001168,1.46e-15,3;UBERON:0005409,7.01e-15,47;UBERON:0002108,6.31e-12,4;UBERON:0004923,1.18e-11,24;UBERON:0001155,7.59e-07,2;UBERON:0000059,7.59e-07,2 | |||
|phase1_expression=0,0,0.454999239389536,1.81478526784098,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430942465371778,1.90023419456374,2.77233142735924,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,0.793351699990633,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.648414149624083,1.99141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:107054473..107054482,- | |||
}} |
Revision as of 18:31, 13 September 2013
Short description: | p@chr1:107054473..107054482, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:107054473..107054482, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.71e-08 | 6 |
gut absorptive cell | 3.71e-08 | 6 |
enterocyte | 3.71e-08 | 6 |
columnar/cuboidal epithelial cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.88e-21 | 13 |
wall of intestine | 2.88e-21 | 13 |
gastrointestinal system mucosa | 2.88e-21 | 13 |
mucosa | 1.77e-18 | 15 |
intestine | 2.46e-17 | 31 |
ileal mucosa | 1.46e-15 | 3 |
ileum | 1.46e-15 | 3 |
mucosa of small intestine | 1.46e-15 | 3 |
wall of small intestine | 1.46e-15 | 3 |
gastrointestinal system | 7.01e-15 | 47 |
small intestine | 6.31e-12 | 4 |
organ component layer | 1.18e-11 | 24 |
colon | 7.59e-07 | 2 |
large intestine | 7.59e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.