FFCP PHASE1:Mm9::chr1:169203647..169203665,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=51|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:169203647..169203665,-|id=chr1:169203647..169203665,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,9.60e-07,3;CL:0000737,9.60e-07,3;CL:0000746,9.60e-07,3;CL:0000513,9.60e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.97e-10!23;UBERON:0000974!1.97e-10!23;UBERON:0004807!1.97e-10!23;UBERON:0005058!1.97e-10!23;UBERON:0003351!1.97e-10!23;UBERON:0009113!1.97e-10!23;UBERON:0003295!1.97e-10!23;UBERON:0009722!1.97e-10!23;UBERON:0005562!1.97e-10!23;UBERON:0007690!1.97e-10!23;UBERON:0006562!9.03e-10!24;UBERON:0003408!9.03e-10!24;UBERON:0001557!9.03e-10!24;UBERON:0001042!9.03e-10!24;UBERON:0008814!9.03e-10!24;UBERON:0009145!9.03e-10!24;UBERON:0000072!2.44e-09!27;UBERON:0004177!3.51e-09!29;UBERON:0000065!4.45e-07!41;UBERON:0001004!9.19e-07!42;UBERON:0000063!9.61e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.31e-19,23;UBERON:0000974,1.31e-19,23;UBERON:0004807,1.31e-19,23;UBERON:0005058,1.31e-19,23;UBERON:0003351,1.31e-19,23;UBERON:0009113,1.31e-19,23;UBERON:0003295,1.31e-19,23;UBERON:0009722,1.31e-19,23;UBERON:0005562,1.31e-19,23;UBERON:0007690,1.31e-19,23;UBERON:0006562,9.85e-19,24;UBERON:0003408,9.85e-19,24;UBERON:0001557,9.85e-19,24;UBERON:0001042,9.85e-19,24;UBERON:0008814,9.85e-19,24;UBERON:0009145,9.85e-19,24;UBERON:0000072,1.72e-16,27;UBERON:0004177,2.97e-15,29;UBERON:0005057,2.97e-15,29;UBERON:0000077,2.19e-12,35;UBERON:0007811,5.33e-12,36;UBERON:0000490,7.54e-12,66;UBERON:0003929,1.19e-10,55;UBERON:0002193,1.80e-10,48;UBERON:0002405,1.80e-10,48;UBERON:0000065,2.36e-10,41;UBERON:0001004,4.52e-10,42;UBERON:0000153,8.40e-10,43;UBERON:0002390,2.67e-09,45;UBERON:0003061,2.67e-09,45;UBERON:0005911,4.22e-08,69|phase1_expression=0,0,0.454999239389536,0,0,1.00727563147134,1.16806320297763,3.22808308603941,0,0,0,0,0.342401459862411,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0.297872853602656,0.261199789138935,0,1.14704640533585,0,0.86152399231815,1.07735616342945,0.950117097281869,0.756090389279792,2.43903561720835,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0.725362142011344,0,1.02903774414379,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0.467061369468678,0.329119699826961,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.170870880797853,0,0,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,1.58005560314089,4.66267995167378,7.29247795870273,5.06691209613401,3.93858730468459,4.37098980518783,0.841368146639782,1.18151621739662,1.11063094942962,1.21930890648,0.604957110821043,0.779663045918019,0.962118416403295,2.33753804363138,0,0,1.61484941897056,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr1:169203647..169203665,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=51 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:169203647..169203665,- | |||
|id=chr1:169203647..169203665,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,9.60e-07,3;CL:0000737,9.60e-07,3;CL:0000746,9.60e-07,3;CL:0000513,9.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.97e-10!23;UBERON:0000974!1.97e-10!23;UBERON:0004807!1.97e-10!23;UBERON:0005058!1.97e-10!23;UBERON:0003351!1.97e-10!23;UBERON:0009113!1.97e-10!23;UBERON:0003295!1.97e-10!23;UBERON:0009722!1.97e-10!23;UBERON:0005562!1.97e-10!23;UBERON:0007690!1.97e-10!23;UBERON:0006562!9.03e-10!24;UBERON:0003408!9.03e-10!24;UBERON:0001557!9.03e-10!24;UBERON:0001042!9.03e-10!24;UBERON:0008814!9.03e-10!24;UBERON:0009145!9.03e-10!24;UBERON:0000072!2.44e-09!27;UBERON:0004177!3.51e-09!29;UBERON:0000065!4.45e-07!41;UBERON:0001004!9.19e-07!42;UBERON:0000063!9.61e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.31e-19,23;UBERON:0000974,1.31e-19,23;UBERON:0004807,1.31e-19,23;UBERON:0005058,1.31e-19,23;UBERON:0003351,1.31e-19,23;UBERON:0009113,1.31e-19,23;UBERON:0003295,1.31e-19,23;UBERON:0009722,1.31e-19,23;UBERON:0005562,1.31e-19,23;UBERON:0007690,1.31e-19,23;UBERON:0006562,9.85e-19,24;UBERON:0003408,9.85e-19,24;UBERON:0001557,9.85e-19,24;UBERON:0001042,9.85e-19,24;UBERON:0008814,9.85e-19,24;UBERON:0009145,9.85e-19,24;UBERON:0000072,1.72e-16,27;UBERON:0004177,2.97e-15,29;UBERON:0005057,2.97e-15,29;UBERON:0000077,2.19e-12,35;UBERON:0007811,5.33e-12,36;UBERON:0000490,7.54e-12,66;UBERON:0003929,1.19e-10,55;UBERON:0002193,1.80e-10,48;UBERON:0002405,1.80e-10,48;UBERON:0000065,2.36e-10,41;UBERON:0001004,4.52e-10,42;UBERON:0000153,8.40e-10,43;UBERON:0002390,2.67e-09,45;UBERON:0003061,2.67e-09,45;UBERON:0005911,4.22e-08,69 | |||
|phase1_expression=0,0,0.454999239389536,0,0,1.00727563147134,1.16806320297763,3.22808308603941,0,0,0,0,0.342401459862411,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0.297872853602656,0.261199789138935,0,1.14704640533585,0,0.86152399231815,1.07735616342945,0.950117097281869,0.756090389279792,2.43903561720835,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0.725362142011344,0,1.02903774414379,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0.467061369468678,0.329119699826961,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0.397912944082302,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.170870880797853,0,0,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,1.58005560314089,4.66267995167378,7.29247795870273,5.06691209613401,3.93858730468459,4.37098980518783,0.841368146639782,1.18151621739662,1.11063094942962,1.21930890648,0.604957110821043,0.779663045918019,0.962118416403295,2.33753804363138,0,0,1.61484941897056,0.167884616364078,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:169203647..169203665,- | |||
}} |
Revision as of 19:35, 13 September 2013
Short description: | p@chr1:169203647..169203665, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:169203647..169203665, - |
Coexpression cluster: | MCL_coexpression_mm9:51 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 9.60e-07 | 3 |
striated muscle cell | 9.60e-07 | 3 |
cardiac muscle cell | 9.60e-07 | 3 |
cardiac muscle myoblast | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.31e-19 | 23 |
neck | 1.31e-19 | 23 |
respiratory system epithelium | 1.31e-19 | 23 |
hemolymphoid system gland | 1.31e-19 | 23 |
pharyngeal epithelium | 1.31e-19 | 23 |
thymic region | 1.31e-19 | 23 |
pharyngeal gland | 1.31e-19 | 23 |
entire pharyngeal arch endoderm | 1.31e-19 | 23 |
thymus primordium | 1.31e-19 | 23 |
early pharyngeal endoderm | 1.31e-19 | 23 |
pharynx | 9.85e-19 | 24 |
gland of gut | 9.85e-19 | 24 |
upper respiratory tract | 9.85e-19 | 24 |
chordate pharynx | 9.85e-19 | 24 |
pharyngeal arch system | 9.85e-19 | 24 |
pharyngeal region of foregut | 9.85e-19 | 24 |
segment of respiratory tract | 1.72e-16 | 27 |
hemopoietic organ | 2.97e-15 | 29 |
immune organ | 2.97e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 2.19e-12 | 35 |
craniocervical region | 5.33e-12 | 36 |
unilaminar epithelium | 7.54e-12 | 66 |
gut epithelium | 1.19e-10 | 55 |
hemolymphoid system | 1.80e-10 | 48 |
immune system | 1.80e-10 | 48 |
respiratory tract | 2.36e-10 | 41 |
respiratory system | 4.52e-10 | 42 |
anterior region of body | 8.40e-10 | 43 |
hematopoietic system | 2.67e-09 | 45 |
blood island | 2.67e-09 | 45 |
endo-epithelium | 4.22e-08 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.