FFCP PHASE1:Hg19::chr6:31913895..31913909,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=629|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1037|TSSclassifier=S|UniProt=F8WBL9|association_with_transcript=0bp_to_ENST00000460718_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_CFB_5end|id=chr6:31913895..31913909,+|ontology_enrichment_celltype=CL:0000077!2.99e-09!19;CL:0000181!8.60e-07!12;CL:0000417!8.60e-07!12;CL:0000668!8.60e-07!12;CL:0000414!8.60e-07!12;CL:0000412!8.60e-07!12;CL:0000182!8.60e-07!12|ontology_enrichment_celltype_v019=CL:0000077;3.57e-12;19!CL:0000182;3.26e-10;12!CL:0000499;2.38e-07;28|ontology_enrichment_celltype_v019_2=CL:0000077,7.74e-12,19;CL:0000182,3.47e-10,12;CL:0000499,1.46e-07,28|ontology_enrichment_development_v019=UBERON:0004161;1.62e-13;11!UBERON:0009497;4.97e-13;13!UBERON:0003104;3.67e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009497!1.85e-13!25;UBERON:0000015!1.85e-13!25;UBERON:0002423!1.85e-13!25;UBERON:0006235!1.85e-13!25;UBERON:0004161!1.85e-13!25;UBERON:0003929!3.89e-13!54;UBERON:0000477!5.79e-12!286;UBERON:0009854!6.02e-12!23;UBERON:0001007!8.46e-12!155;UBERON:0001555!8.46e-12!155;UBERON:0007026!8.46e-12!155;UBERON:0002530!9.83e-12!59;UBERON:0000481!1.10e-11!347;UBERON:0008835!1.48e-11!22;UBERON:0003894!1.48e-11!22;UBERON:0002368!2.68e-11!35;UBERON:0004119!8.07e-11!169;UBERON:0000925!8.07e-11!169;UBERON:0006595!8.07e-11!169;UBERON:0004921!1.21e-10!129;UBERON:0004185!1.21e-10!129;UBERON:0009856!2.80e-10!26;UBERON:0002107!2.89e-10!19;UBERON:0006925!2.89e-10!19;UBERON:0008836!2.89e-10!19;UBERON:0000077!4.96e-10!130;UBERON:0007499!6.90e-10!25;UBERON:0002365!1.09e-09!31;UBERON:0002330!1.09e-09!31;UBERON:0000062!1.14e-09!511;UBERON:0001048!1.46e-09!168;UBERON:0000949!3.73e-09!45;UBERON:0005057!8.89e-09!26;UBERON:0005911!1.32e-08!82;UBERON:0001041!2.06e-08!98;UBERON:0004111!2.87e-08!241;UBERON:0000468!1.47e-07!659;UBERON:0000922!1.63e-07!612;UBERON:0002050!1.80e-07!605;UBERON:0005423!1.80e-07!605;UBERON:0000923!2.35e-07!604;UBERON:0005291!2.35e-07!604;UBERON:0006598!2.35e-07!604;UBERON:0002532!2.35e-07!604;UBERON:0000467!2.82e-07!625;UBERON:0007023!2.98e-07!115;UBERON:0000480!3.76e-07!626;UBERON:0003104!7.75e-07!238;UBERON:0009142!7.75e-07!238|ontology_enrichment_uberon_v019=UBERON:0002423;1.31e-17;25!UBERON:0002107;4.24e-14;19!UBERON:0006925;4.24e-14;19!UBERON:0002368;1.74e-13;33!UBERON:0002365;9.43e-11;31!UBERON:0002330;9.43e-11;31!UBERON:0002530;3.32e-07;57!UBERON:0000949;6.65e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.06e-17,25;UBERON:0000015,1.06e-17,25;UBERON:0002423,1.06e-17,25;UBERON:0006235,1.06e-17,25;UBERON:0004161,1.06e-17,25;UBERON:0009854,1.77e-15,23;UBERON:0008835,6.88e-15,22;UBERON:0003894,6.88e-15,22;UBERON:0002107,4.60e-14,19;UBERON:0006925,4.60e-14,19;UBERON:0008836,4.60e-14,19;UBERON:0002368,2.22e-13,35;UBERON:0003929,3.24e-13,54;UBERON:0009856,6.57e-13,26;UBERON:0007499,2.49e-12,25;UBERON:0002365,4.12e-11,31;UBERON:0002330,4.12e-11,31;UBERON:0002530,2.68e-10,59;UBERON:0000949,8.79e-10,45;UBERON:0001007,1.75e-09,145;UBERON:0001555,1.75e-09,145;UBERON:0007026,1.75e-09,145;UBERON:0005911,2.91e-09,82;UBERON:0005172,2.03e-08,54;UBERON:0005173,2.03e-08,54;UBERON:0004921,2.55e-08,118;UBERON:0004119,2.63e-08,160;UBERON:0000925,2.63e-08,160;UBERON:0006595,2.63e-08,160;UBERON:0002417,5.56e-08,60;UBERON:0000916,5.56e-08,60;UBERON:0001048,9.36e-08,160|phase1_expression=0,0.214100523890983,0.986680828671798,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0,0,0,0,1.60896258848061,1.98838425436749,0,0.602694528023977,0,1.46379839637152,2.21617904538218,0.408001382488506,6.89600387251793,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,1.11957737119962,1.6194683300949,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,2.61188314765726,1.13477044938228,2.4912889959823,0,0,0,6.65939452896706,4.05105399586321,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,1.40648818027883,2.1686349143074,2.00535164254356,5.35932120155048,3.9764297352555,11.1926020169606,3.11964896641424,0,0.87834785693126,9.36500389808645,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.993943903390637,1.77282716330412,5.82600395578163,9.17877186396204,1.06400514659507,5.04609840128076,2.1349799145941,1.2333377420858,0.311211035399766,0.67355336034844,0,3.78393569112329,2.88087962239999,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,9.50402285825643,3.70900393917835,0,0,0,0,0,0,0,5.10809400282429,0.340296549480063,0,0,0.423863802319124,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,1.61646056818812,0,0,0.169560592310488,0,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,1.929722814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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1037 | |||
|TSSclassifier=S | |||
|UniProt=F8WBL9 | |||
|association_with_transcript=0bp_to_ENST00000460718_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_CFB_5end | |||
|id=chr6:31913895..31913909,+ | |||
|ontology_enrichment_celltype=CL:0000077!2.99e-09!19;CL:0000181!8.60e-07!12;CL:0000417!8.60e-07!12;CL:0000668!8.60e-07!12;CL:0000414!8.60e-07!12;CL:0000412!8.60e-07!12;CL:0000182!8.60e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.57e-12;19!CL:0000182;3.26e-10;12!CL:0000499;2.38e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.74e-12,19;CL:0000182,3.47e-10,12;CL:0000499,1.46e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.62e-13;11!UBERON:0009497;4.97e-13;13!UBERON:0003104;3.67e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.85e-13!25;UBERON:0000015!1.85e-13!25;UBERON:0002423!1.85e-13!25;UBERON:0006235!1.85e-13!25;UBERON:0004161!1.85e-13!25;UBERON:0003929!3.89e-13!54;UBERON:0000477!5.79e-12!286;UBERON:0009854!6.02e-12!23;UBERON:0001007!8.46e-12!155;UBERON:0001555!8.46e-12!155;UBERON:0007026!8.46e-12!155;UBERON:0002530!9.83e-12!59;UBERON:0000481!1.10e-11!347;UBERON:0008835!1.48e-11!22;UBERON:0003894!1.48e-11!22;UBERON:0002368!2.68e-11!35;UBERON:0004119!8.07e-11!169;UBERON:0000925!8.07e-11!169;UBERON:0006595!8.07e-11!169;UBERON:0004921!1.21e-10!129;UBERON:0004185!1.21e-10!129;UBERON:0009856!2.80e-10!26;UBERON:0002107!2.89e-10!19;UBERON:0006925!2.89e-10!19;UBERON:0008836!2.89e-10!19;UBERON:0000077!4.96e-10!130;UBERON:0007499!6.90e-10!25;UBERON:0002365!1.09e-09!31;UBERON:0002330!1.09e-09!31;UBERON:0000062!1.14e-09!511;UBERON:0001048!1.46e-09!168;UBERON:0000949!3.73e-09!45;UBERON:0005057!8.89e-09!26;UBERON:0005911!1.32e-08!82;UBERON:0001041!2.06e-08!98;UBERON:0004111!2.87e-08!241;UBERON:0000468!1.47e-07!659;UBERON:0000922!1.63e-07!612;UBERON:0002050!1.80e-07!605;UBERON:0005423!1.80e-07!605;UBERON:0000923!2.35e-07!604;UBERON:0005291!2.35e-07!604;UBERON:0006598!2.35e-07!604;UBERON:0002532!2.35e-07!604;UBERON:0000467!2.82e-07!625;UBERON:0007023!2.98e-07!115;UBERON:0000480!3.76e-07!626;UBERON:0003104!7.75e-07!238;UBERON:0009142!7.75e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.31e-17;25!UBERON:0002107;4.24e-14;19!UBERON:0006925;4.24e-14;19!UBERON:0002368;1.74e-13;33!UBERON:0002365;9.43e-11;31!UBERON:0002330;9.43e-11;31!UBERON:0002530;3.32e-07;57!UBERON:0000949;6.65e-07;43 | |||
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| |||
|short_description=p2@CFB | |||
}} |
Revision as of 20:19, 13 September 2013
Short description: | p2@CFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CFB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000460718_5end |
EntrezGene: | CFB |
HGNC: | 1037 |
UniProt: | F8WBL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.74e-12 | 19 |
hepatocyte | 3.47e-10 | 12 |
stromal cell | 1.46e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.06e-17 | 25 |
anatomical boundary | 1.06e-17 | 25 |
hepatobiliary system | 1.06e-17 | 25 |
foregut-midgut junction | 1.06e-17 | 25 |
septum transversum | 1.06e-17 | 25 |
digestive tract diverticulum | 1.77e-15 | 23 |
hepatic diverticulum | 6.88e-15 | 22 |
liver primordium | 6.88e-15 | 22 |
liver | 4.60e-14 | 19 |
digestive gland | 4.60e-14 | 19 |
liver bud | 4.60e-14 | 19 |
endocrine gland | 2.22e-13 | 35 |
gut epithelium | 3.24e-13 | 54 |
sac | 6.57e-13 | 26 |
epithelial sac | 2.49e-12 | 25 |
exocrine gland | 4.12e-11 | 31 |
exocrine system | 4.12e-11 | 31 |
gland | 2.68e-10 | 59 |
endocrine system | 8.79e-10 | 45 |
digestive system | 1.75e-09 | 145 |
digestive tract | 1.75e-09 | 145 |
primitive gut | 1.75e-09 | 145 |
endo-epithelium | 2.91e-09 | 82 |
abdomen element | 2.03e-08 | 54 |
abdominal segment element | 2.03e-08 | 54 |
subdivision of digestive tract | 2.55e-08 | 118 |
endoderm-derived structure | 2.63e-08 | 160 |
endoderm | 2.63e-08 | 160 |
presumptive endoderm | 2.63e-08 | 160 |
abdominal segment of trunk | 5.56e-08 | 60 |
abdomen | 5.56e-08 | 60 |
primordium | 9.36e-08 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.