FFCP PHASE1:Hg19::chr6:32549685..32549701,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3123|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=4948|TSSclassifier=W|UniProt=|association_with_transcript=-70bp_to_uc011dqb.1_5end|coexpression_cluster_id=C414|description=CAGE_peak_13_at_HLA-DRB1_5end|id=chr6:32549685..32549701,-|ontology_enrichment_celltype=CL:0002393!1.29e-22!9;CL:0002397!1.29e-22!9;CL:0002057!1.72e-11!42;CL:0000842!1.87e-11!3;CL:0000860!1.19e-10!45;CL:0000224!8.21e-09!4;CL:0000738!2.19e-07!140;CL:0000766!2.82e-07!76;CL:0002194!3.64e-07!63;CL:0000576!3.64e-07!63;CL:0000040!3.64e-07!63;CL:0000559!3.64e-07!63;CL:0002009!6.47e-07!65|ontology_enrichment_celltype_v019=CL:0000860;4.57e-09;33!CL:0002057;4.57e-09;33!CL:0000473;7.75e-07;39!CL:0000234;7.75e-07;39!CL:0002393;8.72e-07;6!CL:0002397;8.72e-07;6|ontology_enrichment_celltype_v019_2=CL:0000860,3.76e-13,42;CL:0002057,3.76e-13,42;CL:0000473,1.40e-11,48;CL:0000234,1.40e-11,48;CL:0002194,2.25e-09,59;CL:0000576,2.25e-09,59;CL:0000040,2.25e-09,59;CL:0000559,2.25e-09,59;CL:0002009,4.34e-09,61;CL:0000839,1.89e-08,66;CL:0000557,2.48e-08,67;CL:0000766,8.54e-08,72|ontology_enrichment_development_v019=CL:0002057;3.08e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001282!7.98e-10!1;UBERON:0009842!7.98e-10!1;UBERON:0003704!7.98e-10!1;UBERON:0001171!7.98e-10!1;UBERON:0001172!7.98e-10!1;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1|ontology_enrichment_uberon_v019=UBERON:0001282;1.84e-34;1!UBERON:0009842;1.84e-34;1!UBERON:0003704;1.84e-34;1!UBERON:0001171;1.84e-34;1!UBERON:0001172;1.84e-34;1!UBERON:0001280;1.85e-12;3!UBERON:0004647;1.85e-12;3!UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.84e-34,1;UBERON:0009842,1.84e-34,1;UBERON:0003704,1.84e-34,1;UBERON:0001171,1.84e-34,1;UBERON:0001172,1.84e-34,1;UBERON:0001280,1.85e-12,3;UBERON:0004647,1.85e-12,3;UBERON:0005171,1.85e-12,3;UBERON:0002371,2.05e-07,76;UBERON:0001474,6.53e-07,82;UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.80490002723128,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93645405075148,0,0,0,0,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,2.20966581592539,0,0.422510572623884,0.850417199860174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72258129497307,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@HLA-DRB1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3123 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4948 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-70bp_to_uc011dqb.1_5end | |||
|coexpression_cluster_id=C414 | |||
|description=CAGE_peak_13_at_HLA-DRB1_5end | |||
|id=chr6:32549685..32549701,- | |||
|ontology_enrichment_celltype=CL:0002393!1.29e-22!9;CL:0002397!1.29e-22!9;CL:0002057!1.72e-11!42;CL:0000842!1.87e-11!3;CL:0000860!1.19e-10!45;CL:0000224!8.21e-09!4;CL:0000738!2.19e-07!140;CL:0000766!2.82e-07!76;CL:0002194!3.64e-07!63;CL:0000576!3.64e-07!63;CL:0000040!3.64e-07!63;CL:0000559!3.64e-07!63;CL:0002009!6.47e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.57e-09;33!CL:0002057;4.57e-09;33!CL:0000473;7.75e-07;39!CL:0000234;7.75e-07;39!CL:0002393;8.72e-07;6!CL:0002397;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.76e-13,42;CL:0002057,3.76e-13,42;CL:0000473,1.40e-11,48;CL:0000234,1.40e-11,48;CL:0002194,2.25e-09,59;CL:0000576,2.25e-09,59;CL:0000040,2.25e-09,59;CL:0000559,2.25e-09,59;CL:0002009,4.34e-09,61;CL:0000839,1.89e-08,66;CL:0000557,2.48e-08,67;CL:0000766,8.54e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;3.08e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001282!7.98e-10!1;UBERON:0009842!7.98e-10!1;UBERON:0003704!7.98e-10!1;UBERON:0001171!7.98e-10!1;UBERON:0001172!7.98e-10!1;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.84e-34;1!UBERON:0009842;1.84e-34;1!UBERON:0003704;1.84e-34;1!UBERON:0001171;1.84e-34;1!UBERON:0001172;1.84e-34;1!UBERON:0001280;1.85e-12;3!UBERON:0004647;1.85e-12;3!UBERON:0002394;1.12e-09;4!UBERON:0003928;1.12e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.84e-34,1;UBERON:0009842,1.84e-34,1;UBERON:0003704,1.84e-34,1;UBERON:0001171,1.84e-34,1;UBERON:0001172,1.84e-34,1;UBERON:0001280,1.85e-12,3;UBERON:0004647,1.85e-12,3;UBERON:0005171,1.85e-12,3;UBERON:0002371,2.05e-07,76;UBERON:0001474,6.53e-07,82;UBERON:0002394,7.17e-07,6;UBERON:0003928,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.80490002723128,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93645405075148,0,0,0,0,0,0,0,0,0,0,0,1.13477044938228,0,0,0,0,0,2.20966581592539,0,0.422510572623884,0.850417199860174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72258129497307,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@HLA-DRB1 | |||
}} |
Revision as of 20:24, 13 September 2013
Short description: | p13@HLA-DRB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_HLA-DRB1_5end |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | -70bp_to_uc011dqb.1_5end |
EntrezGene: | HLA-DRB1 |
HGNC: | 4948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.76e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.76e-13 | 42 |
defensive cell | 1.40e-11 | 48 |
phagocyte | 1.40e-11 | 48 |
monopoietic cell | 2.25e-09 | 59 |
monocyte | 2.25e-09 | 59 |
monoblast | 2.25e-09 | 59 |
promonocyte | 2.25e-09 | 59 |
macrophage dendritic cell progenitor | 4.34e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.89e-08 | 66 |
granulocyte monocyte progenitor cell | 2.48e-08 | 67 |
myeloid leukocyte | 8.54e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.84e-34 | 1 |
acinus | 1.84e-34 | 1 |
intrahepatic bile duct | 1.84e-34 | 1 |
portal lobule | 1.84e-34 | 1 |
hepatic acinus | 1.84e-34 | 1 |
liver parenchyma | 1.85e-12 | 3 |
liver lobule | 1.85e-12 | 3 |
hepatic duct | 1.85e-12 | 3 |
bone marrow | 2.05e-07 | 76 |
bone element | 6.53e-07 | 82 |
bile duct | 7.17e-07 | 6 |
digestive system duct | 7.17e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.