FFCP PHASE1:Mm9::chr1:53840652..53840657,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=177|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:53840652..53840657,-|id=chr1:53840652..53840657,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,8.70e-10,25;CL:0000553,1.33e-09,6;CL:0000556,1.33e-09,6;CL:0000988,2.57e-07,32;CL:0002032,2.57e-07,32;CL:0000037,2.57e-07,32;CL:0000837,2.57e-07,32;CL:0000838,6.05e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.99e-11,3;DOID:4045,1.99e-11,3|ontology_enrichment_uberon=UBERON:0002193!1.55e-09!48;UBERON:0002390!3.39e-09!45;UBERON:0003061!3.39e-09!45;UBERON:0003081!2.57e-08!88;UBERON:0004177!8.13e-08!29;UBERON:0002405!2.30e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.76e-09,48;UBERON:0002405,3.76e-09,48;UBERON:0002106,2.48e-08,6;UBERON:0004457,2.48e-08,6;UBERON:0000042,2.48e-08,6;UBERON:0004854,2.48e-08,6;UBERON:0009034,2.48e-08,6;UBERON:0002095,2.48e-08,6;UBERON:0004782,2.48e-08,6;UBERON:0003281,2.48e-08,6;UBERON:0009664,2.48e-08,6;UBERON:0002296,2.48e-08,6;UBERON:0005602,2.48e-08,6;UBERON:0001179,2.48e-08,6;UBERON:0006293,2.48e-08,6;UBERON:0002390,2.57e-08,45;UBERON:0003061,2.57e-08,45|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,3.09735188733667,0.70219357896598,0.34243593645101,0,5.30722262786738,0.34968160967599,0.999329285446988,1.61980213911861,0.699561878128147,6.30924330716475,5.21034847701807,11.8829102503448,0,2.28369187762036,0.783599367416806,0,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0.166234645358492,0.816677425049476,10.8818223991596,6.2506827561904,4.71171369576418,19.9998705930545,16.3930916390027,5.34061388334269,0,0,0,0,0,0,0,0,0,4.36234775750115,0,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,2.84831672011889,0,0,0,0,0,0.470354828542819,0,0.247194967734374,0,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.870848794270651,0,0.420883711772948,0,0,0,0,0.272145996605311,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0.51469581422943,0.852490498186778,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0,1.89811624617805,0.164698954724011,0,0.198956472041151,0.19496408711912,1.79763881730844,1.29682829924817,0.597423819763102,0,0.114248512609729,0,0,0,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.405720242777006,0.482354319504834,0.25462585178142,1.43848068725405,0.324270453550071,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.81931657357869,0.690739927463582,0.433947175744535,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.485561272309963,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0.16488625294148,0,0.241251699712623,0.596861720015682,0.820704498725306,0.874442509889552,0,1.19609616558497,0.412773735926445,0.370389054739423,1.13021074202815,1.23024804948923,1.37266903923914,0,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.523511883968059,0.777689839750757,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0.596044064343795,0.480781798079875,0.590758108698309,0.201932899896295,0.381034033274999,0.806609481094724,0.682205165178267,1.34696578296461,1.75315353272353,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0.114870937911227,0.476293691283074,0,0,0.824171801606613,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0|short_description=p@chr1:53840652..53840657,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:53840652..53840657,- | |||
|id=chr1:53840652..53840657,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,8.70e-10,25;CL:0000553,1.33e-09,6;CL:0000556,1.33e-09,6;CL:0000988,2.57e-07,32;CL:0002032,2.57e-07,32;CL:0000037,2.57e-07,32;CL:0000837,2.57e-07,32;CL:0000838,6.05e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.99e-11,3;DOID:4045,1.99e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.55e-09!48;UBERON:0002390!3.39e-09!45;UBERON:0003061!3.39e-09!45;UBERON:0003081!2.57e-08!88;UBERON:0004177!8.13e-08!29;UBERON:0002405!2.30e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.76e-09,48;UBERON:0002405,3.76e-09,48;UBERON:0002106,2.48e-08,6;UBERON:0004457,2.48e-08,6;UBERON:0000042,2.48e-08,6;UBERON:0004854,2.48e-08,6;UBERON:0009034,2.48e-08,6;UBERON:0002095,2.48e-08,6;UBERON:0004782,2.48e-08,6;UBERON:0003281,2.48e-08,6;UBERON:0009664,2.48e-08,6;UBERON:0002296,2.48e-08,6;UBERON:0005602,2.48e-08,6;UBERON:0001179,2.48e-08,6;UBERON:0006293,2.48e-08,6;UBERON:0002390,2.57e-08,45;UBERON:0003061,2.57e-08,45 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,3.09735188733667,0.70219357896598,0.34243593645101,0,5.30722262786738,0.34968160967599,0.999329285446988,1.61980213911861,0.699561878128147,6.30924330716475,5.21034847701807,11.8829102503448,0,2.28369187762036,0.783599367416806,0,0.22940928106717,0.57423196411502,0,0,0,0.252030129759931,0,0,0.61506478758457,0,0,0.166234645358492,0.816677425049476,10.8818223991596,6.2506827561904,4.71171369576418,19.9998705930545,16.3930916390027,5.34061388334269,0,0,0,0,0,0,0,0,0,4.36234775750115,0,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,2.84831672011889,0,0,0,0,0,0.470354828542819,0,0.247194967734374,0,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.599075622529601,0,0.381210681219194,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.870848794270651,0,0.420883711772948,0,0,0,0,0.272145996605311,0,0.187403449119458,0,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0.51469581422943,0.852490498186778,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0.134206418760372,0,0,0,0.528901133327089,0,0.232236671860439,0,0,0,0,1.89811624617805,0.164698954724011,0,0.198956472041151,0.19496408711912,1.79763881730844,1.29682829924817,0.597423819763102,0,0.114248512609729,0,0,0,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.405720242777006,0.482354319504834,0.25462585178142,1.43848068725405,0.324270453550071,0,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.81931657357869,0.690739927463582,0.433947175744535,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.485561272309963,0,0,0.295301892880773,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0.16488625294148,0,0.241251699712623,0.596861720015682,0.820704498725306,0.874442509889552,0,1.19609616558497,0.412773735926445,0.370389054739423,1.13021074202815,1.23024804948923,1.37266903923914,0,0.279902904647316,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0.523511883968059,0.777689839750757,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0.596044064343795,0.480781798079875,0.590758108698309,0.201932899896295,0.381034033274999,0.806609481094724,0.682205165178267,1.34696578296461,1.75315353272353,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0.114870937911227,0.476293691283074,0,0,0.824171801606613,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr1:53840652..53840657,- | |||
}} |
Revision as of 20:31, 13 September 2013
Short description: | p@chr1:53840652..53840657, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:53840652..53840657, - |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 8.70e-10 | 25 |
megakaryocyte progenitor cell | 1.33e-09 | 6 |
megakaryocyte | 1.33e-09 | 6 |
hematopoietic cell | 2.57e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.57e-07 | 32 |
hematopoietic stem cell | 2.57e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.57e-07 | 32 |
lymphoid lineage restricted progenitor cell | 6.05e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.76e-09 | 48 |
immune system | 3.76e-09 | 48 |
spleen | 2.48e-08 | 6 |
cavity lining | 2.48e-08 | 6 |
serous membrane | 2.48e-08 | 6 |
gastrointestinal system mesentery | 2.48e-08 | 6 |
stomach region | 2.48e-08 | 6 |
mesentery | 2.48e-08 | 6 |
gastrointestinal system serosa | 2.48e-08 | 6 |
mesentery of stomach | 2.48e-08 | 6 |
gut mesentery | 2.48e-08 | 6 |
dorsal mesentery | 2.48e-08 | 6 |
dorsal mesogastrium | 2.48e-08 | 6 |
peritoneal cavity | 2.48e-08 | 6 |
spleen primordium | 2.48e-08 | 6 |
hematopoietic system | 2.57e-08 | 45 |
blood island | 2.57e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.99e-11 | 3 |
muscle cancer | 1.99e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.