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FFCP PHASE1:Mm9::chr2:143836938..143836972,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=81910|HGNC=|MCL_coexpression_id=341|UniProt=A2AVJ7,Q99PL5,Q8CAB9|association_with_transcript=26bp_to_ENSMUST00000016072,ENSMUST00000037875,NM_024281,NM_133626,uc008mqj.1,uc008mqk.1,uc008mql.1,uc008mqm.1,uc012cff.1_5end|description=CAGE_peak_1_at_Rrbp1_5end|id=chr2:143836938..143836972,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.34e-17!43;UBERON:0005409!2.16e-16!59;UBERON:0004119!1.12e-15!130;UBERON:0000925!1.12e-15!130;UBERON:0006595!1.12e-15!130;UBERON:0001007!8.58e-15!128;UBERON:0001555!8.58e-15!128;UBERON:0007026!8.58e-15!128;UBERON:0004921!2.52e-14!126;UBERON:0004185!2.52e-14!126;UBERON:0000466!1.68e-10!79;UBERON:0002108!1.40e-09!16;UBERON:0002365!1.00e-08!25;UBERON:0002330!1.00e-08!25;UBERON:0001045!1.89e-08!13;UBERON:0001264!6.65e-08!12;UBERON:0003922!6.65e-08!12;UBERON:0002114!6.65e-08!12;UBERON:0003923!6.65e-08!12;UBERON:0003924!6.65e-08!12;UBERON:0003921!6.65e-08!12;UBERON:0009854!1.09e-07!23;UBERON:0009856!1.09e-07!23;UBERON:0002107!3.50e-07!22;UBERON:0007499!3.50e-07!22;UBERON:0006925!3.50e-07!22;UBERON:0009497!3.50e-07!22;UBERON:0000015!3.50e-07!22;UBERON:0002423!3.50e-07!22;UBERON:0006235!3.50e-07!22;UBERON:0008835!3.50e-07!22;UBERON:0003894!3.50e-07!22;UBERON:0004161!3.50e-07!22;UBERON:0008836!3.50e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.27e-10,31;UBERON:0004119,3.88e-10,118;UBERON:0000925,3.88e-10,118;UBERON:0006595,3.88e-10,118;UBERON:0005409,3.93e-10,47;UBERON:0001007,2.00e-09,116;UBERON:0001555,2.00e-09,116;UBERON:0007026,2.00e-09,116;UBERON:0004921,4.77e-09,114;UBERON:0002365,1.00e-08,25;UBERON:0002330,1.00e-08,25;UBERON:0002100,1.48e-08,90;UBERON:0005177,2.01e-08,79;UBERON:0001264,6.65e-08,12;UBERON:0009854,1.09e-07,23;UBERON:0009856,1.09e-07,23;UBERON:0002107,3.50e-07,22;UBERON:0007499,3.50e-07,22;UBERON:0006925,3.50e-07,22;UBERON:0009497,3.50e-07,22;UBERON:0000015,3.50e-07,22;UBERON:0002423,3.50e-07,22;UBERON:0006235,3.50e-07,22;UBERON:0008835,3.50e-07,22;UBERON:0003894,3.50e-07,22;UBERON:0004161,3.50e-07,22;UBERON:0008836,3.50e-07,22|phase1_expression=105.21779254785,483.330939580515,401.76432838096,552.904578268885,523.436037793933,233.520067229439,268.654536684855,20.6597317506522,74.33644529608,100.413681792135,23.6280796151197,36.1367880248874,25.6801094896809,18.3582845079895,36.3089640379072,31.5861417128128,19.5877325875881,36.7513422642347,43.6023898866249,51.3511478675617,61.5713420693745,33.0638867498948,23.7691808116431,230.389088822506,166.551138054765,272.760182954635,257.595673703127,248.222860054144,317.529133911601,274.460811308565,242.351448146248,15.8757668364908,18.4519436275371,15.8481681015439,58.92573042926,68.1562045969819,73.0926295419281,67.3835925486421,46.880120671428,63.3463730208296,61.7643062432565,79.9163217401381,53.891649186458,160.392546100885,156.931489527809,150.324790020417,55.5497854487108,39.4625533048608,60.4137002519798,67.8560347769249,78.6723689534537,64.6886539642372,47.6502601203971,39.1695556686126,43.0200062902354,253.91506336748,210.029011475109,172.750150912943,19.4223802425214,17.4567023159771,19.6487735086916,75.5623306514165,90.7080692033362,76.9414258275596,103.830968069532,82.4156933337476,55.4260204459049,67.6224217365936,14.3091664985699,14.7156472781543,13.0401476037857,38.8485338789173,42.4067598627098,12.9840247167851,12.555756703389,7.35375029288017,26.4278114398533,33.0710205640636,37.9408137142921,21.4974649000216,21.225133315759,26.045668527838,19.5428099300967,32.0774687718058,31.6292372897997,70.1216033427329,52.6775218956681,38.2118863941866,94.5062892798137,105.649041029286,100.872842068184,167.78265601137,198.551629442663,236.389997937364,315.14156246212,205.19631429058,134.264865645955,224.456734835302,141.063800499358,121.548813631557,62.3936349610695,142.442389929893,234.420820530114,184.877342819866,65.3802943853867,71.1941221985027,63.6960800718627,158.487225050055,178.149263949254,127.660239595749,112.071521090924,152.841670112695,125.454830507296,110.178250243967,120.17565869269,77.4106202590801,284.521407862264,193.763138272682,105.268655682035,266.753535563278,153.484855329973,207.04173308874,397.0144513946,42.4532155666743,27.6469652993761,438.108849682734,64.3407218596792,36.5940665905979,71.4134676150624,47.9330046095433,45.7500602818627,17.4659549436882,39.631945003839,38.6130340568799,40.7264567336738,45.9142774481754,221.195098282887,189.720630180392,105.132667508409,97.6450211313239,85.619251469459,69.2005334344753,82.8285797104606,120.714559086408,89.6040693822988,108.512321081268,76.366905516179,126.505948291379,71.9997096395693,129.159452754621,158.883865120046,175.575781674487,288.613044696171,272.333194220334,344.890860619713,138.527849705671,66.0080396074441,74.8882409703821,73.5983463434585,87.6142017825173,132.507223889319,100.654692356707,108.902578369197,125.338815623096,136.834929131105,103.477605413931,112.94310198924,85.47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|EntrezGene=81910
|HGNC=
|MCL_coexpression_id=341
|UniProt=A2AVJ7,Q99PL5,Q8CAB9
|association_with_transcript=26bp_to_ENSMUST00000016072,ENSMUST00000037875,NM_024281,NM_133626,uc008mqj.1,uc008mqk.1,uc008mql.1,uc008mqm.1,uc012cff.1_5end
|description=CAGE_peak_1_at_Rrbp1_5end
|id=chr2:143836938..143836972,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!8.34e-17!43;UBERON:0005409!2.16e-16!59;UBERON:0004119!1.12e-15!130;UBERON:0000925!1.12e-15!130;UBERON:0006595!1.12e-15!130;UBERON:0001007!8.58e-15!128;UBERON:0001555!8.58e-15!128;UBERON:0007026!8.58e-15!128;UBERON:0004921!2.52e-14!126;UBERON:0004185!2.52e-14!126;UBERON:0000466!1.68e-10!79;UBERON:0002108!1.40e-09!16;UBERON:0002365!1.00e-08!25;UBERON:0002330!1.00e-08!25;UBERON:0001045!1.89e-08!13;UBERON:0001264!6.65e-08!12;UBERON:0003922!6.65e-08!12;UBERON:0002114!6.65e-08!12;UBERON:0003923!6.65e-08!12;UBERON:0003924!6.65e-08!12;UBERON:0003921!6.65e-08!12;UBERON:0009854!1.09e-07!23;UBERON:0009856!1.09e-07!23;UBERON:0002107!3.50e-07!22;UBERON:0007499!3.50e-07!22;UBERON:0006925!3.50e-07!22;UBERON:0009497!3.50e-07!22;UBERON:0000015!3.50e-07!22;UBERON:0002423!3.50e-07!22;UBERON:0006235!3.50e-07!22;UBERON:0008835!3.50e-07!22;UBERON:0003894!3.50e-07!22;UBERON:0004161!3.50e-07!22;UBERON:0008836!3.50e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.27e-10,31;UBERON:0004119,3.88e-10,118;UBERON:0000925,3.88e-10,118;UBERON:0006595,3.88e-10,118;UBERON:0005409,3.93e-10,47;UBERON:0001007,2.00e-09,116;UBERON:0001555,2.00e-09,116;UBERON:0007026,2.00e-09,116;UBERON:0004921,4.77e-09,114;UBERON:0002365,1.00e-08,25;UBERON:0002330,1.00e-08,25;UBERON:0002100,1.48e-08,90;UBERON:0005177,2.01e-08,79;UBERON:0001264,6.65e-08,12;UBERON:0009854,1.09e-07,23;UBERON:0009856,1.09e-07,23;UBERON:0002107,3.50e-07,22;UBERON:0007499,3.50e-07,22;UBERON:0006925,3.50e-07,22;UBERON:0009497,3.50e-07,22;UBERON:0000015,3.50e-07,22;UBERON:0002423,3.50e-07,22;UBERON:0006235,3.50e-07,22;UBERON:0008835,3.50e-07,22;UBERON:0003894,3.50e-07,22;UBERON:0004161,3.50e-07,22;UBERON:0008836,3.50e-07,22
|phase1_expression=105.21779254785,483.330939580515,401.76432838096,552.904578268885,523.436037793933,233.520067229439,268.654536684855,20.6597317506522,74.33644529608,100.413681792135,23.6280796151197,36.1367880248874,25.6801094896809,18.3582845079895,36.3089640379072,31.5861417128128,19.5877325875881,36.7513422642347,43.6023898866249,51.3511478675617,61.5713420693745,33.0638867498948,23.7691808116431,230.389088822506,166.551138054765,272.760182954635,257.595673703127,248.222860054144,317.529133911601,274.460811308565,242.351448146248,15.8757668364908,18.4519436275371,15.8481681015439,58.92573042926,68.1562045969819,73.0926295419281,67.3835925486421,46.880120671428,63.3463730208296,61.7643062432565,79.9163217401381,53.891649186458,160.392546100885,156.931489527809,150.324790020417,55.5497854487108,39.4625533048608,60.4137002519798,67.8560347769249,78.6723689534537,64.6886539642372,47.6502601203971,39.1695556686126,43.0200062902354,253.91506336748,210.029011475109,172.750150912943,19.4223802425214,17.4567023159771,19.6487735086916,75.5623306514165,90.7080692033362,76.9414258275596,103.830968069532,82.4156933337476,55.4260204459049,67.6224217365936,14.3091664985699,14.7156472781543,13.0401476037857,38.8485338789173,42.4067598627098,12.9840247167851,12.555756703389,7.35375029288017,26.4278114398533,33.0710205640636,37.9408137142921,21.4974649000216,21.225133315759,26.045668527838,19.5428099300967,32.0774687718058,31.6292372897997,70.1216033427329,52.6775218956681,38.2118863941866,94.5062892798137,105.649041029286,100.872842068184,167.78265601137,198.551629442663,236.389997937364,315.14156246212,205.19631429058,134.264865645955,224.456734835302,141.063800499358,121.548813631557,62.3936349610695,142.442389929893,234.420820530114,184.877342819866,65.3802943853867,71.1941221985027,63.6960800718627,158.487225050055,178.149263949254,127.660239595749,112.071521090924,152.841670112695,125.454830507296,110.178250243967,120.17565869269,77.4106202590801,284.521407862264,193.763138272682,105.268655682035,266.753535563278,153.484855329973,207.04173308874,397.0144513946,42.4532155666743,27.6469652993761,438.108849682734,64.3407218596792,36.5940665905979,71.4134676150624,47.9330046095433,45.7500602818627,17.4659549436882,39.631945003839,38.6130340568799,40.7264567336738,45.9142774481754,221.195098282887,189.720630180392,105.132667508409,97.6450211313239,85.619251469459,69.2005334344753,82.8285797104606,120.714559086408,89.6040693822988,108.512321081268,76.366905516179,126.505948291379,71.9997096395693,129.159452754621,158.883865120046,175.575781674487,288.613044696171,272.333194220334,344.890860619713,138.527849705671,66.0080396074441,74.8882409703821,73.5983463434585,87.6142017825173,132.507223889319,100.654692356707,108.902578369197,125.338815623096,136.834929131105,103.477605413931,112.94310198924,85.4722306127681,130.00228143165,157.92910044409,133.439260512479,121.345989563026,159.612933816594,100.252194813998,35.9595812044658,28.6074822414411,577.902451438663,535.512397493677,106.857413518152,129.123589554404,182.089722848118,219.835041839443,230.828409510975,254.902338990829,370.607197066264,279.164728257198,268.174667789888,244.716460610616,281.528141800009,409.861650346325,368.731513086228,312.253516462848,49.3136542478012,121.446168904142,118.343122456734,129.318593181775,125.293306710286,112.848534203523,146.392583442656,131.668251997805,129.209953013451,117.597497217476,280.74063785153,120.46216632702,135.429147632997,134.017818981373,188.862773012696,237.077148036626,321.592450799933,408.2408190427,238.500918586077,353.635100186249,593.762692957974,350.928913651399,405.336937375814,389.224050916499,465.35689067584,261.001945057582,153.345147838282,93.79824882639,135.097965470439,140.718676107631,151.375210146084,127.137249398338,160.679457598059,138.154622683322,255.368933452029,206.405090752658,212.234297083115,185.165545628784,184.945615578374,149.27782845612,147.775458260487,217.562273527484,432.260795983733,295.252318546064,55.3899535457882,62.5910406402365,80.4920581799476,92.1518884295961,34.7059041357882,40.6056294068504,51.9170388536045,53.0510731454666,67.9535955951302,65.6737551430091,42.5051236758639,50.8525192765683,49.806260021262,56.552551690238,152.585591598889,211.720002760366,204.423133988738,193.509954246784,2032.32806798483,160.235219862288,199.533547596736,708.400679563153,774.872166919148,718.783375892902,397.204286599556,485.681062581947,507.295769441458,1300.17522214795,1866.96355786323,1577.97381169726,170.900682088402,78.6866980916826,88.9987744425351,93.4509472737742,92.03958126034,138.949308912013,124.069961533999,77.6385620242228,259.546909118464,330.881694689287,268.383060432889,244.856085618098,195.371956302046,216.161522942511,147.902334219886,166.931295040727,320.920401129466,73.9846955021934,93.978984438819,146.947449989814,134.080837815671,67.05917069367,64.5196754843239,68.4046737887503,67.1414798475729,61.0188332131149,64.4011877928615,263.489090572171,100.43667796201,158.589184358942,179.720887127477,188.388554709036,223.821627839832,259.074409405241,288.708520848598,220.398503150553,283.986406482318,455.441716492717,97.5188783923649,130.37842815035,105.727975402085,168.005826729257,164.032975816719,182.30365940455,132.965751385639,116.923537589867,87.2429745621914,92.2851341555343,87.849151908649,52.4578460242776,106.836188457917,106.305840665596,69.5076402931203,60.6900498312762,54.8360539196291,41.4674300843892,50.9528868752291,47.0503656758368,46.2575316395849,38.5156027222731,47.7543615624787,38.2923129728511,43.2444538071805,148.281670884348,52.1666990429052,50.1500458446969,88.3073082075053,147.017281058497,293.535391605649,238.280263171712,134.408973682574,334.047021287552,33.885110557024,27.1591889539234,37.8111038870002,26.2935368985842,16.4419804744954,17.3740596399631,16.2005400055633,20.2644541450899,22.203978040226,17.0860902878101,35.0801234834517,157.614824993407,132.830745276716,193.512946786362,84.0548782138209,100.378555613708,184.464784075341,192.848813575605,212.448516749782,180.931203622879,200.75560551307,177.308760902912,161.344317370607,169.410553263284,148.413251781305,175.276078392171,164.787511493585,157.606833118847,163.186016718109,194.302574577404,201.607120402624,186.172120661145,181.449940549911,198.107165869864,191.700807906028,175.236852943662,168.476663015824,171.784521568911,178.310801479617,182.371238288765,180.206592530621,170.215745544974,182.107814210512,180.191546299278,193.678237425066,154.632747743589,198.374003961706,177.483490643894,183.445510454021,185.737974898632,150.018489646413
|short_description=p1@Rrbp1
}}

Revision as of 22:16, 13 September 2013

Short description:p1@Rrbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rrbp1_5end
Coexpression cluster:MCL_coexpression_mm9:341
Association with transcript: 26bp_to_ENSMUST00000016072, ENSMUST00000037875, NM_024281, NM_133626, uc008mqj.1, uc008mqk.1, uc008mql.1, uc008mqm.1, uc012cff.1_5end
EntrezGene:Rrbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rrbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7105.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5483.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6401.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I3552.90
CD326+ enterocyte, pool2.CNhs13197.11849-124I4523.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7233.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8268.65
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E774.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2100.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E623.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F136.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A136.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A519.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A236.75
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A443.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A651.35
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A361.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.77
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1230.39
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2166.55
GP2+ M cell, pool1.CNhs13228.11845-124H9272.76
GP2+ M cell, pool2.CNhs13231.11846-124I1257.60
GP2+ M cell, pool3.CNhs13240.11847-124I2248.22
Ileum epithelium, pool1.CNhs13199.10252-104B9317.53
Ileum epithelium, pool2.CNhs13232.10253-104C1274.46
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8242.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G618.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F558.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F668.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F773.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G867.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H363.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H279.92
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H453.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8160.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9156.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3150.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B755.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.46
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B860.41
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C367.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C478.67
Mouse Astrocytes, donor3.CNhs12107.11633-122C464.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A247.65
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A143.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1253.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1210.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5172.75
Mouse Granule cells, donor1.CNhs12131.11713-123C319.42
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C675.56
Mouse Meningeal cells, donor3.CNhs12109.11639-122D190.71
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C776.94
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7103.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D282.42
Mouse Microglia, donor1.CNhs12629.11718-123C855.43
Mouse Microglia, donor2.CNhs12634.11736-123E867.62
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D542.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D670.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F652.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.21
Mouse Schwann, donor1.CNhs12507.11728-123D994.51
Mouse Schwann, donor2.CNhs12573.11746-123F9105.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3100.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7167.78
Mouse hepatocyte, donor1.CNhs13078.11714-123C4198.55
Mouse hepatocyte, donor3.CNhs12615.11637-122C8236.39
Mouse hepatocyte, donor6.CNhs13090.11822-124F4315.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F6205.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7134.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7224.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3141.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8121.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G662.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1142.44
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8234.42
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6184.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G165.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G271.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G363.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6158.49
accessory axillary lymph node, adult.CNhs10475.1063-29H9178.15
adrenal gland, adult.CNhs10508.49-24D7127.66
adrenal gland, embryo E14.CNhs11038.406-44C5112.07
adrenal gland, embryo E16.CNhs11004.1254-43D6152.84
adrenal gland, embryo E17.CNhs11043.1263-45I1125.45
adrenal gland, embryo E18.CNhs11026.1262-18F5110.18
adrenal gland, neonate N00.CNhs11191.1311-23C1120.18
adrenal gland, neonate N25.CNhs11223.1377-27I377.41
amnion, adult pregnant day17.5.CNhs10488.583-22A8284.52
aorta, adult.CNhs10498.46-23H1193.76
bone (os femoris), adult.CNhs10483.56-12G2105.27
bone (os femoris), neonate N02.CNhs11227.1985-43F5266.75
bone (os femoris), neonate N16.CNhs11225.1525-43A6153.48
bone (os femoris), neonate N20.CNhs11195.1350-25C3207.04
cecum, adult.CNhs10467.37-13H4397.01
cerebellum, adult.CNhs10494.15-8B242.45
cerebellum, neonate N30.CNhs11135.1395-42I227.65
colon, adult.CNhs10468.36-18H7438.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C764.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D136.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D471.41
corpora quadrigemina, adult.CNhs10501.16-22A447.93
corpus striatum, adult.CNhs10487.19-21D845.75
corpus striatum, neonate N00.CNhs11226.630-43F117.47
cortex, adult.CNhs10473.12-14D539.63
cortex, neonate N30.CNhs11107.1392-42F238.61
diencephalon, adult.CNhs10482.20-12F240.73
diencephalon, neonate N30.CNhs11201.1388-42B245.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1221.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2189.72
epididymis, adult.CNhs10490.58-23B2105.13
eyeball, adult.CNhs10484.31-12G497.65
eyeball, embryo E12.CNhs11016.345-16C685.62
eyeball, embryo E14.CNhs10521.399-16E269.20
eyeball, embryo E15.CNhs10593.426-16C982.83
eyeball, embryo E17.CNhs11023.1261-18D4120.71
eyeball, neonate N00.CNhs11207.633-15C689.60
eyeball, neonate N01.CNhs11140.1532-43E7108.51
eyeball, neonate N02.CNhs11205.1551-44G876.37
eyeball, neonate N16.CNhs11188.777-19A2126.51
forelimb, embryo E11.CNhs10596.335-25E272.00
forelimb, embryo E12.CNhs10600.359-14H2129.16
forelimb, embryo E13.CNhs10589.384-1E2158.88
forelimb, embryo E14.CNhs10577.413-26A8175.58
forelimb, embryo E15.CNhs11007.437-20E7288.61
forelimb, embryo E17.CNhs10598.1517-43C4272.33
forelimb, embryo E18.CNhs11008.1520-43B5344.89
gonad, embryo E13.CNhs11044.1564-45I6138.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C866.01
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D274.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D573.60
heart, embryo E11.CNhs10586.331-24E987.61
heart, embryo E12.CNhs11015.353-12F5132.51
heart, embryo E13.CNhs11013.376-3I9100.65
heart, embryo E14.CNhs10597.403-26D4108.90
heart, embryo E15.CNhs11017.431-16C8125.34
heart, embryo E16.CNhs11021.457-17C6136.83
heart, embryo E17.CNhs11025.479-18E5103.48
heart, embryo E18.CNhs11030.1283-20G3112.94
heart, neonate N00.CNhs11213.639-21E385.47
heart, neonate N03.CNhs11221.1349-25I2130.00
heart, neonate N10.CNhs11118.749-24G1157.93
heart, neonate N16.CNhs11209.782-15G1133.44
heart, neonate N20.CNhs11127.821-26I6121.35
heart, neonate N25.CNhs11196.1351-25D3159.61
heart, neonate N30.CNhs11202.1390-42D2100.25
hippocampus, adult.CNhs10478.13-16E835.96
hippocampus, neonate N00.CNhs11228.627-43G128.61
intestinal mucosa, adult.CNhs10506.860-29I3577.90
intestine, adult.CNhs10496.178-9A3535.51
intestine, embryo E12.CNhs11019.1251-16I5106.86
intestine, embryo E13.CNhs11010.381-16D5129.12
intestine, embryo E15.CNhs10602.976-16D8182.09
intestine, embryo E16.CNhs10585.463-22H4219.84
intestine, embryo E17.CNhs10582.482-18D3230.83
intestine, embryo E18.CNhs10526.1289-20F7254.90
intestine, neonate N00.CNhs11126.644-26D1370.61
intestine, neonate N01.CNhs11192.1322-23E9279.16
intestine, neonate N06.CNhs11102.688-20B8268.17
intestine, neonate N07.CNhs11095.720-20F2244.72
intestine, neonate N10.CNhs11098.755-23A5281.53
intestine, neonate N20.CNhs11187.827-18D1409.86
intestine, neonate N25.CNhs11121.1352-25E3368.73
intestine, neonate N30.CNhs11131.1384-42G1312.25
kidney, embryo E14.CNhs10606.411-4I949.31
kidney, embryo E15.CNhs10997.434-16F8121.45
kidney, embryo E16.CNhs10584.464-22A5118.34
kidney, embryo E17.CNhs11028.483-18I2129.32
kidney, embryo E18.CNhs11001.1288-20C7125.29
kidney, neonate N00.CNhs11214.646-21G7112.85
kidney, neonate N10.CNhs11206.758-6D5146.39
kidney, neonate N20.CNhs11113.832-19I1131.67
kidney, neonate N25.CNhs11122.1353-25F3129.21
kidney, neonate N30.CNhs11203.1385-42H1117.60
liver, adult pregnant day01.CNhs10466.508-5B2280.74
liver, embryo E12.CNhs10601.355-15F8120.46
liver, embryo E13.CNhs10524.378-3H6135.43
liver, embryo E14.CNhs10594.409-16E1134.02
liver, embryo E15.CNhs10520.433-16D7188.86
liver, embryo E16.CNhs10523.462-17F5237.08
liver, embryo E17.CNhs10510.481-18A3321.59
liver, embryo E18.CNhs10579.499-43G4408.24
liver, neonate N00.CNhs11117.641-24F4238.50
liver, neonate N03.CNhs11123.1345-25G2353.64
liver, neonate N06.CNhs11101.684-20A8593.76
liver, neonate N07.CNhs11103.716-20H2350.93
liver, neonate N10.CNhs11115.751-24B9405.34
liver, neonate N20.CNhs11220.823-25A3389.22
liver, neonate N25.CNhs11198.1368-26H1465.36
liver, neonate N30.CNhs11106.1382-42D1261.00
lung, adult.CNhs10474.28-22B1153.35
lung, embryo E12.CNhs10522.354-16G293.80
lung, embryo E14.CNhs10604.404-26F8135.10
lung, embryo E15.CNhs11020.432-17C5140.72
lung, embryo E16.CNhs10998.458-17B6151.38
lung, embryo E17.CNhs10605.480-44A6127.14
lung, embryo E18.CNhs10583.1287-20I6160.68
lung, neonate N00.CNhs11224.640-42C6138.15
lung, neonate N06.CNhs11212.683-20E5255.37
lung, neonate N07.CNhs11111.715-19A3206.41
lung, neonate N10.CNhs11219.750-23E6212.23
lung, neonate N20.CNhs11109.822-18A4185.17
lung, neonate N25.CNhs11119.1359-25C7184.95
lung, neonate N30.CNhs11133.1394-42H2149.28
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1147.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1217.56
mammary gland, adult lactating day02.CNhs10480.595-22B6432.26
mammary gland, adult pregnant day19.CNhs10476.588-5H2295.25
medulla oblongata, adult.CNhs10477.17-12C255.39
medulla oblongata, neonate N30.CNhs11200.1396-42A362.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C780.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C292.15
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E134.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E240.61
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E351.92
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D753.05
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D867.95
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D550.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D649.81
olfactory brain, adult.CNhs10489.18-22I956.55
ovary, adult.CNhs10507.91-2I7152.59
ovary, embryo E18.CNhs11040.505-44H7211.72
ovary, neonate N00.CNhs11217.1299-22I4204.42
oviduct, adult pregnant day01.CNhs10500.988-6G6193.51
pancreas, adult.CNhs10486.34-16E42032.33
pancreas, embryo E14.CNhs11012.405-44F4160.24
pancreas, embryo E15.CNhs11042.1556-45F2199.53
pancreas, embryo E16.CNhs11003.460-26E5708.40
pancreas, embryo E17.CNhs10599.1558-45G3774.87
pancreas, embryo E18.CNhs10580.1535-43I7718.78
pancreas, neonate N00.CNhs11105.645-26G9397.20
pancreas, neonate N01.CNhs11138.1531-43D7485.68
pancreas, neonate N02.CNhs11139.1539-43D8507.30
pancreas, neonate N16.CNhs11136.787-43B61300.18
pancreas, neonate N25.CNhs11094.1555-45E21866.96
pancreas, neonate N30.CNhs11182.1548-44H51577.97
pituitary gland, adult.CNhs10493.21-1G8170.90
pituitary gland, embryo E12.CNhs11018.346-16E678.69
pituitary gland, embryo E13.CNhs11009.370-44C789.00
pituitary gland, embryo E14.CNhs11037.398-44A593.45
pituitary gland, embryo E15.CNhs10592.427-16B992.04
pituitary gland, embryo E16.CNhs11036.449-43F6138.95
pituitary gland, embryo E17.CNhs11039.1265-44F5124.07
pituitary gland, neonate N00.CNhs11190.1308-22E977.64
placenta, adult pregnant day10.CNhs10472.539-13I7259.55
placenta, adult pregnant day17.CNhs10464.577-18G3330.88
prostate, adult.CNhs10470.859-1F8268.38
skin, adult.CNhs10492.30-1C3244.86
skin, neonate N00.CNhs11124.650-25G4195.37
skin, neonate N03.CNhs11215.662-22H3216.16
skin, neonate N06.CNhs11097.693-20I5147.90
skin, neonate N10.CNhs11108.762-6C4166.93
small intestine, neonate N16.CNhs11114.790-21I1320.92
spinal cord, adult.CNhs10505.24-13C973.98
spleen, adult.CNhs10465.25-2G293.98
spleen, embryo E16.CNhs11035.461-43C1146.95
spleen, embryo E18.CNhs11011.1271-21F2134.08
spleen, neonate N10.CNhs11116.752-24D167.06
spleen, neonate N20.CNhs11112.824-19H164.52
spleen, neonate N25.CNhs11099.1354-25G368.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C667.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C961.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D364.40
stomach, adult.CNhs10503.33-1H6263.49
stomach, embryo E12.CNhs10588.356-43E3100.44
stomach, embryo E15.CNhs10603.1252-16G8158.59
stomach, embryo E16.CNhs11022.459-17D4179.72
stomach, embryo E17.CNhs11006.1035-18D5188.39
stomach, embryo E18.CNhs10999.1286-20C6223.82
stomach, neonate N03.CNhs11193.1340-24B8259.07
stomach, neonate N07.CNhs11210.718-18A9288.71
stomach, neonate N25.CNhs11104.1355-25E4220.40
stomach, neonate N30.CNhs11134.1386-42I1283.99
submandibular gland, adult.CNhs10469.59-29C1455.44
testis, adult.CNhs10504.57-7G597.52
testis, embryo E13.CNhs11031.389-23F5130.38
testis, embryo E15.CNhs11034.443-27C5105.73
testis, embryo E16.CNhs11033.470-26G5168.01
testis, embryo E17.CNhs11029.486-18I5164.03
testis, embryo E18.CNhs11027.503-18G5182.30
testis, neonate N00.CNhs11189.1300-22B7132.97
testis, neonate N07.CNhs11222.726-26I4116.92
testis, neonate N10.CNhs11204.763-44D987.24
testis, neonate N20.CNhs11110.839-18H392.29
testis, neonate N30.CNhs11130.1391-42E287.85
thymus, adult.CNhs10471.38-12B552.46
thymus, embryo E14.CNhs11041.402-44I4106.84
thymus, embryo E15.CNhs11005.430-45I2106.31
thymus, embryo E16.CNhs11002.456-26C569.51
thymus, embryo E17.CNhs10581.478-18C160.69
thymus, embryo E18.CNhs10595.1273-19G454.84
thymus, neonate N02.CNhs11181.1541-43F841.47
thymus, neonate N03.CNhs11137.2104-43C750.95
thymus, neonate N06.CNhs11197.681-26C447.05
thymus, neonate N07.CNhs11211.713-19D346.26
thymus, neonate N10.CNhs11194.748-24E438.52
thymus, neonate N20.CNhs11186.820-7A247.75
thymus, neonate N25.CNhs11125.1362-25G738.29
thymus, neonate N30.CNhs11132.1393-42G243.24
tongue, adult.CNhs10499.32-1B4148.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H352.17
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F750.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G588.31
urinary bladder, adult.CNhs10481.879-12E4147.02
uterus, adult pregnant day19.CNhs10497.590-15F5293.54
uterus, adult.CNhs10509.92-27E5238.28
vagina, adult.CNhs10502.89-27D5134.41
vesicular gland, adult.CNhs10491.51-27F8334.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I835.08
whole body, embryo E12.CNhs10587.857-27C9157.61
whole body, embryo E13.CNhs10512.372-23H2132.83
whole body, embryo E14.5.CNhs10578.420-27D2193.51
whole body, embryo E14.CNhs10519.395-14B184.05
whole body, embryo E16.CNhs10514.453-14F2100.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5184.46
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5192.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5212.45
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5180.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5200.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5177.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5161.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5169.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5148.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5175.28
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5164.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5157.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5163.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5194.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5201.61
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5186.17
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5181.45
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5198.11
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5191.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5175.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5168.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5171.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5178.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5182.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5180.21
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5170.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5182.11
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5180.19
whole body, embryo E17.5.CNhs10513.490-9F9193.68
whole body, embryo E17.CNhs10517.475-3I5154.63
whole body, embryo E18.CNhs10516.493-3B3198.37
whole body, neonate N00.CNhs10525.657-19C2177.48
whole body, neonate N01.CNhs10576.659-23C6183.45
whole body, neonate N06.CNhs10515.692-21D1185.74
whole body, neonate N10.CNhs10518.761-6B4150.02





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine3.27e-1031
endoderm-derived structure3.88e-10118
endoderm3.88e-10118
presumptive endoderm3.88e-10118
gastrointestinal system3.93e-1047
digestive system2.00e-09116
digestive tract2.00e-09116
primitive gut2.00e-09116
subdivision of digestive tract4.77e-09114
exocrine gland1.00e-0825
exocrine system1.00e-0825
trunk1.48e-0890
trunk region element2.01e-0879
pancreas6.65e-0812
digestive tract diverticulum1.09e-0723
sac1.09e-0723
liver3.50e-0722
epithelial sac3.50e-0722
digestive gland3.50e-0722
epithelium of foregut-midgut junction3.50e-0722
anatomical boundary3.50e-0722
hepatobiliary system3.50e-0722
foregut-midgut junction3.50e-0722
hepatic diverticulum3.50e-0722
liver primordium3.50e-0722
septum transversum3.50e-0722
liver bud3.50e-0722







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