Personal tools

FFCP PHASE1:Mm9::chr2:152934225..152934278,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=15162|HGNC=|MCL_coexpression_id=3|UniProt=F6UND7,P08103,A2AMC5|association_with_transcript=21bp_to_ENSMUST00000003370,ENSMUST00000109799,NM_001172117,NM_010407,uc008nhc.2_5end|description=CAGE_peak_1_at_Hck_5end|id=chr2:152934225..152934278,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.71e-09!16;UBERON:0001474!1.01e-08!22;UBERON:0004765!1.01e-08!22;UBERON:0001434!1.01e-08!22;UBERON:0002405!2.10e-08!70;UBERON:0002204!7.35e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-09,16;UBERON:0001474,5.60e-09,22;UBERON:0004765,5.60e-09,22;UBERON:0001434,5.60e-09,22;UBERON:0002204,2.56e-07,32|phase1_expression=1.12104192973356,1.04692622291808,0.909998478779072,0,0,35.2546471014969,31.0704811992049,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,27.6481102307,27.941586899796,11.8925519281785,91.641759036568,85.010948835558,90.3949958329804,3.82694805679814,3.27660138962921,3.6567970479451,19.0390983124154,22.7115188256498,2.8711598205751,4.30761996159075,4.30942465371778,0.570070258369122,0.756090389279792,7.31710685162506,0,0,0,6.06588401477677,3.15845826181135,2.85837098767317,482.985501870392,331.286186078091,322.49062628786,449.408856855695,433.050837463655,393.263385955234,0,0,0,0.782391344348039,2.39827672018491,3.73466510648602,1.36100929351998,2.93971485413261,7.18762821824858,51.5092600597251,1.45072428402269,0.672187598284928,0.514518872071894,3.72493471920384,3.09403255366465,1.21389876515759,1.05798195854407,0,1.0165335962074,0,120.586562115707,117.67509714547,131.438821265029,23.668408730954,12.6792040756113,0.103689612308478,0.135005938331691,0.420649922702764,2.57085885963423,2.42955395046775,0.367472397644862,0.287536413054709,0,1.10115880999389,1.78762273319263,1.22885226604995,0.395658863190582,0.274462930807229,1.04182674111352,0.837548997004143,0.56276261003168,1.22238598221448,2.06240009831567,2.56269025438385,0.372798891650601,0.454357159999104,0.755715601067855,0.289864488701678,9.46466264679525,0,1.61910957491345,1.29955283489534,0,10.3928870897496,0,0,0,0,0,0,0,0,0,0,4.11061966988616,42.7247508017833,7.71899123137089,2.94925055502431,2.13125834818499,2.7673859670727,4.37095657602605,3.52766121407114,3.89566433121994,0.741584903203122,3.61498392299779,93.7687185066867,6.30890714794896,18.9923705875938,21.819386391085,1.86391761218122,0.878342391034642,0.628340120440365,13.0283098156382,2.99537811264801,4.79922184794726,2.92261522268049,1.19832511523858,2.74500361691176,0.628271760564322,1.39059456153821,1.53429274398198,1.0389402227978,1.62241263067758,3.1570202793598,24.8813941220186,1.51633655060205,3.57751155007006,0.260240885925407,0.689706313300419,1.26043490863744,1.50704817835715,0.476255494059295,1.0249097622788,1.3118241438362,0,1.29340795759705,1.32374256117473,1.05570674498369,3.06874025398605,2.78047249225598,4.52727816478817,5.76189981942242,1.19420560091096,3.51106593656617,4.63226232806487,6.53576048609863,0.621377317606506,0.938104239924385,0.900310307305074,0.710234206755631,1.57411385397923,0.617068451549513,0.232533944750408,1.07309360559848,0.700592054203017,1.31647879930784,1.47750717671186,1.54030738137126,2.63159977365598,7.02560368931362,2.54992195644706,1.68231958851302,1.02904612379284,5.94753809370836,2.90895623329899,0.853153002140936,1.39342003116263,2.06187938115349,2.01683524623343,2.44615848229357,4.75564065281398,13.7613427847908,2.30578536613615,4.77536896720512,2.98434708061726,5.65395852645448,4.49409704327111,8.64552199498777,7.96565093017469,0.758671603812327,1.82797620175566,2.25415471346161,1.22190796707189,2.13347735884388,1.05203729835478,1.3279672796094,1.18088118383682,2.04098346193787,0.740382983530803,11.858105083486,3.17005700860579,6.2898878436225,5.17182858485164,7.30296436998611,9.64708639009667,13.4951701444152,20.4264257590076,12.9708181420028,15.9245619649087,21.5652309791032,16.3742016974142,14.3537329632698,13.3866805311969,6.99649912735457,7.71909634181387,31.5927955184894,0.947457058852424,0.977789858652155,1.18821560042632,0.469380496577004,6.86775655511445,15.4728366575909,17.5620283072019,20.0196633014863,20.5962161373361,22.9614866866781,30.3147132224115,33.6735714638496,25.8921814860906,72.3798162908507,156.644836939788,3.93411418415229,3.86311444826625,2.56880943980467,1.64096361229084,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0.321321316421807,4.5420827266646,1.6025904330053,2.60619134965722,15.5071915594183,3.98235415019888,1.21390318077491,3.62788268357701,0.943025398779491,1.47650946440386,3.68922177532713,3.6179961043551,2.90826983582004,3.20847640546249,3.47640433729398,2.10837217149998,3.09406629744561,1.36175842301515,0.36012218806262,0.776152102696527,1.07168517515796,1.41872186913819,1.07021290561242,1.64549020602121,2.13125464380219,2.3467170806371,1.0591603543191,1.54369878638473,2.4732937941222,1.77610869365496,4.34253059482722,2.50681922406587,0.984845398470368,9.03590593552537,3.33765543618917,53.31171480893,18.9875918526165,31.6682641802207,20.9088987275207,25.1517379006686,56.5082087820111,1.86976272993241,2.37917468950219,4.14599921413271,2.86401185404534,0.949007980743406,2.03319467126849,3.13215488383224,1.25452977608681,3.49380101993884,2.69728692769641,4.29797969771747,7.0674104335688,2.98114438571124,3.10669656543463,1.12738587736838,0.747582730219894,0.992750942742586,2.91676782516071,3.48731523389874,2.87225413334323,2.93393096614385,2.3436789271911,1.67774951081137,0,0.288030006257865,7.58426689507628,4.25722952109345,2.77319584345034,1.42912905275575,2.8644271306797,2.98022032171897,3.846254384639,2.95379054349154,2.42319479875554,1.5241361331,3.52891647978942,3.8983152295901,5.29165129021812,3.03879945672079,1.58711268530648,0.221985953374065,0,0.167884616364078,3.09103350451505,7.3196165425961,4.57879060668163,6.43105137237198,3.00943262421218,1.12950368523413,0.460325236507177,0.572895513439397,1.20297227640581,2.74033007908257,1.5107877947794,2.70009000092722,0,2.26571204492102,0.51776031175182,0.726511433089237,0,1.19513524027894,3.8897074730927,3.77303692730368,3.12533964365024,4.00044110042907,4.73880631649457,4.81378814387723,5.81203587056734,4.05566879824384,4.90428487603798,3.65201879132541,4.54578582074572,3.27382173046996,2.38146845641537,4.1718357340148,3.6652751888104,4.94503080963968,4.12156976376312,3.42869252385415,5.14679837862079,4.76872379894642,4.94177816549917,4.04670335785922,3.89227196301712,4.20734337607377,4.47218509444333,3.39510284614654,5.05028044491965,2.37270036248348,4.53120618927592,3.6830793885272,4.64810523557898,4.62975866354739,2.74791635731741,7.71974307869848,5.15690529715916,3.06061331310149,7.27951683094401,7.18790290423307|short_description=p1@Hck}}
|EntrezGene=15162
|HGNC=
|MCL_coexpression_id=3
|UniProt=F6UND7,P08103,A2AMC5
|association_with_transcript=21bp_to_ENSMUST00000003370,ENSMUST00000109799,NM_001172117,NM_010407,uc008nhc.2_5end
|description=CAGE_peak_1_at_Hck_5end
|id=chr2:152934225..152934278,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002371!5.71e-09!16;UBERON:0001474!1.01e-08!22;UBERON:0004765!1.01e-08!22;UBERON:0001434!1.01e-08!22;UBERON:0002405!2.10e-08!70;UBERON:0002204!7.35e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-09,16;UBERON:0001474,5.60e-09,22;UBERON:0004765,5.60e-09,22;UBERON:0001434,5.60e-09,22;UBERON:0002204,2.56e-07,32
|phase1_expression=1.12104192973356,1.04692622291808,0.909998478779072,0,0,35.2546471014969,31.0704811992049,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,27.6481102307,27.941586899796,11.8925519281785,91.641759036568,85.010948835558,90.3949958329804,3.82694805679814,3.27660138962921,3.6567970479451,19.0390983124154,22.7115188256498,2.8711598205751,4.30761996159075,4.30942465371778,0.570070258369122,0.756090389279792,7.31710685162506,0,0,0,6.06588401477677,3.15845826181135,2.85837098767317,482.985501870392,331.286186078091,322.49062628786,449.408856855695,433.050837463655,393.263385955234,0,0,0,0.782391344348039,2.39827672018491,3.73466510648602,1.36100929351998,2.93971485413261,7.18762821824858,51.5092600597251,1.45072428402269,0.672187598284928,0.514518872071894,3.72493471920384,3.09403255366465,1.21389876515759,1.05798195854407,0,1.0165335962074,0,120.586562115707,117.67509714547,131.438821265029,23.668408730954,12.6792040756113,0.103689612308478,0.135005938331691,0.420649922702764,2.57085885963423,2.42955395046775,0.367472397644862,0.287536413054709,0,1.10115880999389,1.78762273319263,1.22885226604995,0.395658863190582,0.274462930807229,1.04182674111352,0.837548997004143,0.56276261003168,1.22238598221448,2.06240009831567,2.56269025438385,0.372798891650601,0.454357159999104,0.755715601067855,0.289864488701678,9.46466264679525,0,1.61910957491345,1.29955283489534,0,10.3928870897496,0,0,0,0,0,0,0,0,0,0,4.11061966988616,42.7247508017833,7.71899123137089,2.94925055502431,2.13125834818499,2.7673859670727,4.37095657602605,3.52766121407114,3.89566433121994,0.741584903203122,3.61498392299779,93.7687185066867,6.30890714794896,18.9923705875938,21.819386391085,1.86391761218122,0.878342391034642,0.628340120440365,13.0283098156382,2.99537811264801,4.79922184794726,2.92261522268049,1.19832511523858,2.74500361691176,0.628271760564322,1.39059456153821,1.53429274398198,1.0389402227978,1.62241263067758,3.1570202793598,24.8813941220186,1.51633655060205,3.57751155007006,0.260240885925407,0.689706313300419,1.26043490863744,1.50704817835715,0.476255494059295,1.0249097622788,1.3118241438362,0,1.29340795759705,1.32374256117473,1.05570674498369,3.06874025398605,2.78047249225598,4.52727816478817,5.76189981942242,1.19420560091096,3.51106593656617,4.63226232806487,6.53576048609863,0.621377317606506,0.938104239924385,0.900310307305074,0.710234206755631,1.57411385397923,0.617068451549513,0.232533944750408,1.07309360559848,0.700592054203017,1.31647879930784,1.47750717671186,1.54030738137126,2.63159977365598,7.02560368931362,2.54992195644706,1.68231958851302,1.02904612379284,5.94753809370836,2.90895623329899,0.853153002140936,1.39342003116263,2.06187938115349,2.01683524623343,2.44615848229357,4.75564065281398,13.7613427847908,2.30578536613615,4.77536896720512,2.98434708061726,5.65395852645448,4.49409704327111,8.64552199498777,7.96565093017469,0.758671603812327,1.82797620175566,2.25415471346161,1.22190796707189,2.13347735884388,1.05203729835478,1.3279672796094,1.18088118383682,2.04098346193787,0.740382983530803,11.858105083486,3.17005700860579,6.2898878436225,5.17182858485164,7.30296436998611,9.64708639009667,13.4951701444152,20.4264257590076,12.9708181420028,15.9245619649087,21.5652309791032,16.3742016974142,14.3537329632698,13.3866805311969,6.99649912735457,7.71909634181387,31.5927955184894,0.947457058852424,0.977789858652155,1.18821560042632,0.469380496577004,6.86775655511445,15.4728366575909,17.5620283072019,20.0196633014863,20.5962161373361,22.9614866866781,30.3147132224115,33.6735714638496,25.8921814860906,72.3798162908507,156.644836939788,3.93411418415229,3.86311444826625,2.56880943980467,1.64096361229084,0,3.53459298086122,0,0,0,0,0,0,0,0,0,0.321321316421807,4.5420827266646,1.6025904330053,2.60619134965722,15.5071915594183,3.98235415019888,1.21390318077491,3.62788268357701,0.943025398779491,1.47650946440386,3.68922177532713,3.6179961043551,2.90826983582004,3.20847640546249,3.47640433729398,2.10837217149998,3.09406629744561,1.36175842301515,0.36012218806262,0.776152102696527,1.07168517515796,1.41872186913819,1.07021290561242,1.64549020602121,2.13125464380219,2.3467170806371,1.0591603543191,1.54369878638473,2.4732937941222,1.77610869365496,4.34253059482722,2.50681922406587,0.984845398470368,9.03590593552537,3.33765543618917,53.31171480893,18.9875918526165,31.6682641802207,20.9088987275207,25.1517379006686,56.5082087820111,1.86976272993241,2.37917468950219,4.14599921413271,2.86401185404534,0.949007980743406,2.03319467126849,3.13215488383224,1.25452977608681,3.49380101993884,2.69728692769641,4.29797969771747,7.0674104335688,2.98114438571124,3.10669656543463,1.12738587736838,0.747582730219894,0.992750942742586,2.91676782516071,3.48731523389874,2.87225413334323,2.93393096614385,2.3436789271911,1.67774951081137,0,0.288030006257865,7.58426689507628,4.25722952109345,2.77319584345034,1.42912905275575,2.8644271306797,2.98022032171897,3.846254384639,2.95379054349154,2.42319479875554,1.5241361331,3.52891647978942,3.8983152295901,5.29165129021812,3.03879945672079,1.58711268530648,0.221985953374065,0,0.167884616364078,3.09103350451505,7.3196165425961,4.57879060668163,6.43105137237198,3.00943262421218,1.12950368523413,0.460325236507177,0.572895513439397,1.20297227640581,2.74033007908257,1.5107877947794,2.70009000092722,0,2.26571204492102,0.51776031175182,0.726511433089237,0,1.19513524027894,3.8897074730927,3.77303692730368,3.12533964365024,4.00044110042907,4.73880631649457,4.81378814387723,5.81203587056734,4.05566879824384,4.90428487603798,3.65201879132541,4.54578582074572,3.27382173046996,2.38146845641537,4.1718357340148,3.6652751888104,4.94503080963968,4.12156976376312,3.42869252385415,5.14679837862079,4.76872379894642,4.94177816549917,4.04670335785922,3.89227196301712,4.20734337607377,4.47218509444333,3.39510284614654,5.05028044491965,2.37270036248348,4.53120618927592,3.6830793885272,4.64810523557898,4.62975866354739,2.74791635731741,7.71974307869848,5.15690529715916,3.06061331310149,7.27951683094401,7.18790290423307
|short_description=p1@Hck
}}

Revision as of 22:28, 13 September 2013

Short description:p1@Hck
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hck_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 21bp_to_ENSMUST00000003370, ENSMUST00000109799, NM_001172117, NM_010407, uc008nhc.2_5end
EntrezGene:Hck
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hck

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I735.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.94
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A291.64
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A485.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A690.39
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.71
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8482.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1331.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3322.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9449.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2433.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4393.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7120.59
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7117.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2131.44
Mouse Microglia, donor1.CNhs12629.11718-123C823.67
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H942.72
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G293.77
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A618.99
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H713.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.88
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B211.86
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A313.50
liver, embryo E18.CNhs10579.499-43G420.43
liver, neonate N00.CNhs11117.641-24F412.97
liver, neonate N03.CNhs11123.1345-25G215.92
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A313.39
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B131.59
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A66.87
lung, embryo E18.CNhs10583.1287-20I615.47
lung, neonate N00.CNhs11224.640-42C617.56
lung, neonate N06.CNhs11212.683-20E520.02
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E622.96
lung, neonate N20.CNhs11109.822-18A430.31
lung, neonate N25.CNhs11119.1359-25C733.67
lung, neonate N30.CNhs11133.1394-42H225.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A172.38
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1156.64
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G615.51
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H34.34
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G253.31
spleen, embryo E16.CNhs11035.461-43C118.99
spleen, embryo E18.CNhs11011.1271-21F231.67
spleen, neonate N10.CNhs11116.752-24D120.91
spleen, neonate N20.CNhs11112.824-19H125.15
spleen, neonate N25.CNhs11099.1354-25G356.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A23.90
thymus, neonate N25.CNhs11125.1362-25G75.29
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F57.32
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
bone marrow4.40e-0916
bone element5.60e-0922
skeletal element5.60e-0922
skeletal system5.60e-0922
musculoskeletal system2.56e-0732







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:152934225..152934278,%2B&oldid=2980438"