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FFCP PHASE1:Mm9::chr2:26771843..26771885,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20930|HGNC=|UniProt=E9Q5F2|association_with_transcript=0bp_to_ENSMUST00000129682,ENSMUST00000133513,ENSMUST00000147110,ENSMUST00000169815_5end|description=CAGE_peak_1_at_Surf1_5end|id=chr2:26771843..26771885,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.64e-12!50;UBERON:0006238!1.64e-12!50;UBERON:0001049!3.90e-12!52;UBERON:0005068!3.90e-12!52;UBERON:0006241!3.90e-12!52;UBERON:0007135!3.90e-12!52;UBERON:0002616!4.86e-12!49;UBERON:0007023!4.53e-11!51;UBERON:0004111!5.73e-10!122;UBERON:0000033!5.78e-10!63;UBERON:0002346!2.10e-09!71;UBERON:0003075!2.10e-09!71;UBERON:0007284!2.10e-09!71;UBERON:0000025!4.75e-09!114;UBERON:0002020!9.15e-09!34;UBERON:0001017!1.10e-08!73;UBERON:0005743!1.10e-08!73;UBERON:0003080!2.53e-08!40;UBERON:0000073!3.20e-08!75;UBERON:0001016!3.20e-08!75;UBERON:0000477!3.52e-08!154;UBERON:0002780!8.68e-08!39;UBERON:0001890!8.68e-08!39;UBERON:0006240!8.68e-08!39;UBERON:0000119!9.64e-08!183;UBERON:0002791!1.00e-07!29;UBERON:0003528!1.00e-07!29;UBERON:0001893!1.00e-07!29;UBERON:0000480!1.88e-07!308;UBERON:0000467!1.88e-07!308;UBERON:0000483!1.89e-07!181;UBERON:0007811!5.80e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.41e-13,54;UBERON:0001049,3.90e-12,52;UBERON:0005068,3.90e-12,52;UBERON:0006241,3.90e-12,52;UBERON:0007135,3.90e-12,52;UBERON:0007023,4.53e-11,51;UBERON:0000955,6.80e-11,47;UBERON:0006238,6.80e-11,47;UBERON:0002616,1.93e-10,46;UBERON:0004111,5.73e-10,122;UBERON:0000025,4.75e-09,114;UBERON:0002020,9.15e-09,34;UBERON:0001017,1.10e-08,73;UBERON:0002346,2.19e-08,64;UBERON:0003075,2.19e-08,64;UBERON:0007284,2.19e-08,64;UBERON:0003080,2.53e-08,40;UBERON:0001016,3.20e-08,75;UBERON:0002780,8.68e-08,39;UBERON:0001890,8.68e-08,39;UBERON:0006240,8.68e-08,39;UBERON:0003528,1.00e-07,29;UBERON:0002791,1.00e-07,29;UBERON:0001893,1.00e-07,29;UBERON:0010314,9.29e-07,92|phase1_expression=34.9124486688451,26.8711063882308,30.9399482784885,27.2217790176147,17.5313505481222,27.1964420497261,30.6032559180139,49.5833562015653,21.2590970449017,19.4273556847255,26.0251311702768,25.7664073554937,35.0961496358972,44.1473032215937,27.3150004688843,27.7391116324062,20.9868563438444,42.2719301580038,43.1910465858077,40.7414065726109,37.2489610861686,42.7943999675816,34.2171723772005,36.1582875513099,49.7818139915759,43.0673973086265,40.491627638953,43.3097177698637,54.9167682228921,41.5849714103886,52.3284005146519,23.4961349180064,19.0670084151217,0,48.2382204984629,57.1847180033214,51.0423390655923,56.0832385187456,56.2561448057136,50.2582794214846,55.8819913629464,65.5723665560108,64.5728769531434,79.0632016886625,76.843713864392,57.4501334266063,58.6793508261029,28.5612954858385,53.1640562217422,50.5517737593137,35.4165646712167,40.250718022192,26.6774343631801,30.4652099644765,23.19047214083,27.5267596558463,34.9570796725283,48.988848766357,32.9775831201144,43.9062512795787,31.691570175309,33.5456086748441,47.1326241938904,44.5450360054292,56.3653826663175,59.6803296554724,32.9560121570245,34.9638657842615,26.7519199755872,28.351247049655,29.4454945891935,50.5602242394732,61.4014543845486,34.4199145794021,29.5204050736168,40.4456266108409,68.271846219621,70.1003486087681,74.1919555627656,39.1702274558676,36.3205945101566,42.1939830150976,94.9222196604695,109.738708956178,80.9830713217094,39.1856018679978,41.5725307933381,36.5342913817589,31.5778226199377,23.1248973926764,27.2472619379577,54.2067042498273,45.5580793584193,88.511323428602,81.2220521809586,80.1968127904231,38.2008822758365,48.9135025799026,46.7614808285164,41.3407302177098,31.5489260299764,34.6481489018658,22.9324715735981,7.11066703153331,23.5975234702223,27.1095056058356,20.2209778005913,49.555803798072,46.3498811728437,54.4782650367907,27.7576522825817,36.8403228757691,41.5107895060905,45.3675148063394,40.215337840411,48.6329708445844,50.922163353281,53.0679639896076,28.307537662396,20.544389943321,16.5631138845295,28.6076399349781,55.9175283654366,59.1417209963325,57.3883976668867,42.1504141094176,30.6726718735156,31.1949420116572,29.8615033621702,86.2794082971779,71.3700940397057,36.3141077606178,71.4417955990256,48.8416523500931,82.2840656455858,64.4097814378998,30.0426123358433,33.5898820647251,63.686135125286,44.1927897361595,23.0313184043986,30.3470777852184,21.0672691872259,26.5240479390859,26.2620886724126,29.9786105466548,28.1105173679186,45.5317932500668,15.3053274982318,23.6382600209774,21.6419882721657,24.9883134967435,26.4144886764318,23.6811473235073,30.4557561883756,23.6850777514007,28.0885274925294,25.9921386185862,28.9846769383505,22.1624576612987,21.1073453982987,27.3694333420743,23.4377288229358,27.7437566763839,26.9967447552912,25.5787339225449,24.1446061259657,28.6075088799565,25.013097186849,35.4601722410846,30.1575971510583,42.5441963407717,34.2498179854039,40.1277192093512,68.3442332833414,28.9161960785789,45.2673732687803,39.4031344328681,23.0351310578053,20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|EntrezGene=20930
|HGNC=
|UniProt=E9Q5F2
|association_with_transcript=0bp_to_ENSMUST00000129682,ENSMUST00000133513,ENSMUST00000147110,ENSMUST00000169815_5end
|description=CAGE_peak_1_at_Surf1_5end
|id=chr2:26771843..26771885,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.41e-13,54;UBERON:0001049,3.90e-12,52;UBERON:0005068,3.90e-12,52;UBERON:0006241,3.90e-12,52;UBERON:0007135,3.90e-12,52;UBERON:0007023,4.53e-11,51;UBERON:0000955,6.80e-11,47;UBERON:0006238,6.80e-11,47;UBERON:0002616,1.93e-10,46;UBERON:0004111,5.73e-10,122;UBERON:0000025,4.75e-09,114;UBERON:0002020,9.15e-09,34;UBERON:0001017,1.10e-08,73;UBERON:0002346,2.19e-08,64;UBERON:0003075,2.19e-08,64;UBERON:0007284,2.19e-08,64;UBERON:0003080,2.53e-08,40;UBERON:0001016,3.20e-08,75;UBERON:0002780,8.68e-08,39;UBERON:0001890,8.68e-08,39;UBERON:0006240,8.68e-08,39;UBERON:0003528,1.00e-07,29;UBERON:0002791,1.00e-07,29;UBERON:0001893,1.00e-07,29;UBERON:0010314,9.29e-07,92
|phase1_expression=34.9124486688451,26.8711063882308,30.9399482784885,27.2217790176147,17.5313505481222,27.1964420497261,30.6032559180139,49.5833562015653,21.2590970449017,19.4273556847255,26.0251311702768,25.7664073554937,35.0961496358972,44.1473032215937,27.3150004688843,27.7391116324062,20.9868563438444,42.2719301580038,43.1910465858077,40.7414065726109,37.2489610861686,42.7943999675816,34.2171723772005,36.1582875513099,49.7818139915759,43.0673973086265,40.491627638953,43.3097177698637,54.9167682228921,41.5849714103886,52.3284005146519,23.4961349180064,19.0670084151217,0,48.2382204984629,57.1847180033214,51.0423390655923,56.0832385187456,56.2561448057136,50.2582794214846,55.8819913629464,65.5723665560108,64.5728769531434,79.0632016886625,76.843713864392,57.4501334266063,58.6793508261029,28.5612954858385,53.1640562217422,50.5517737593137,35.4165646712167,40.250718022192,26.6774343631801,30.4652099644765,23.19047214083,27.5267596558463,34.9570796725283,48.988848766357,32.9775831201144,43.9062512795787,31.691570175309,33.5456086748441,47.1326241938904,44.5450360054292,56.3653826663175,59.6803296554724,32.9560121570245,34.9638657842615,26.7519199755872,28.351247049655,29.4454945891935,50.5602242394732,61.4014543845486,34.4199145794021,29.5204050736168,40.4456266108409,68.271846219621,70.1003486087681,74.1919555627656,39.1702274558676,36.3205945101566,42.1939830150976,94.9222196604695,109.738708956178,80.9830713217094,39.1856018679978,41.5725307933381,36.5342913817589,31.5778226199377,23.1248973926764,27.2472619379577,54.2067042498273,45.5580793584193,88.511323428602,81.2220521809586,80.1968127904231,38.2008822758365,48.9135025799026,46.7614808285164,41.3407302177098,31.5489260299764,34.6481489018658,22.9324715735981,7.11066703153331,23.5975234702223,27.1095056058356,20.2209778005913,49.555803798072,46.3498811728437,54.4782650367907,27.7576522825817,36.8403228757691,41.5107895060905,45.3675148063394,40.215337840411,48.6329708445844,50.922163353281,53.0679639896076,28.307537662396,20.544389943321,16.5631138845295,28.6076399349781,55.9175283654366,59.1417209963325,57.3883976668867,42.1504141094176,30.6726718735156,31.1949420116572,29.8615033621702,86.2794082971779,71.3700940397057,36.3141077606178,71.4417955990256,48.8416523500931,82.2840656455858,64.4097814378998,30.0426123358433,33.5898820647251,63.686135125286,44.1927897361595,23.0313184043986,30.3470777852184,21.0672691872259,26.5240479390859,26.2620886724126,29.9786105466548,28.1105173679186,45.5317932500668,15.3053274982318,23.6382600209774,21.6419882721657,24.9883134967435,26.4144886764318,23.6811473235073,30.4557561883756,23.6850777514007,28.0885274925294,25.9921386185862,28.9846769383505,22.1624576612987,21.1073453982987,27.3694333420743,23.4377288229358,27.7437566763839,26.9967447552912,25.5787339225449,24.1446061259657,28.6075088799565,25.013097186849,35.4601722410846,30.1575971510583,42.5441963407717,34.2498179854039,40.1277192093512,68.3442332833414,28.9161960785789,45.2673732687803,39.4031344328681,23.0351310578053,20.669063795579,21.7786009634338,29.0424275457613,37.1371333220933,44.1323452581137,39.860441169739,40.5159428621067,45.7430080016491,48.1474662339585,43.0870632533256,34.1551375288604,43.2276099749388,51.5775897728811,24.0878234210414,19.0795016058247,20.2873924211545,26.2710212920455,25.407775818959,24.3371295019405,26.8122917406851,42.8069429140846,44.1166425234263,50.3460428800946,72.9273462634386,23.1914696945371,19.4593405162071,25.6342808118733,22.1117532313468,28.7000820105376,35.1383675458359,26.1803485080238,26.9144476446559,39.5368434990837,27.3159592401974,47.2619003538999,49.3019523521006,53.0415643688935,50.7694680267011,60.7878836917843,45.818791161318,23.4969350595401,14.1779529504563,18.6719594352707,22.2955735874077,21.4408009525524,24.9945822930314,25.172240573656,29.1625016596453,28.7904096543407,27.7451297464028,43.0960517702391,40.7536557203514,43.828664750198,45.2373851817817,41.3368319702219,22.1293922858566,32.2845993176537,90.8716339330903,69.5065301491765,26.0656563148914,36.3558135174297,21.7700671397217,23.4263246577983,24.3428439438063,17.9226598464414,23.171062104569,18.3999745012741,19.8357243820698,22.2114452012597,19.7643888973262,57.5165156395035,29.5235377233199,31.3395462454369,27.8536700494615,40.7476203742163,22.5666735177937,28.8908957024428,26.6044730128981,34.1375194358176,26.2818684663888,23.6725063916824,33.0788215255323,30.5368332761105,31.7282666762402,28.4433082142234,30.5713964867496,25.7838858120467,48.0019844112841,23.227881130039,34.4094098862127,27.0064664139806,27.842416681837,31.5712807155665,33.4034511822306,49.6277867056797,28.6299483837727,51.8988573616359,78.5081097075664,29.6795255294664,27.1260236849121,20.0842040010759,21.1289048885552,20.3534715683876,33.228815375803,80.8454316765822,31.9528547091985,26.004745363366,30.9274860707418,27.5017947226849,23.9214898511794,31.5713879025001,19.5475194492934,22.3922323717853,20.868196044468,56.3255664628917,16.9239756565907,21.7551829825728,26.2452978196977,28.4360082579677,35.1563727631346,28.9958344727365,34.3838375817397,38.2163675296683,83.9905026930818,37.2803587852155,28.7483398728937,20.1847337159371,22.005979230794,24.306398543006,22.6029691086029,26.3571555765614,32.5079551048739,21.4837234992518,22.7544777403793,24.3999962034266,20.1621004380506,36.6572899928687,26.3542779877213,28.6563570489868,33.2597306823155,29.002324698132,30.000884571971,29.9286669304722,31.7532483425341,30.088002084548,31.0161703085849,35.8941219087152,33.1356794515158,34.0589919406766,42.4263154919095,28.7947587191318,0.221985953374065,14.6233586273445,14.941730856403,47.5246401319189,38.8502724183947,39.9270540902638,27.0104157639623,55.6745035479253,46.8744029372165,44.6515479411962,46.9774321020305,56.0241374440422,61.6574267793578,64.2084812781245,54.6768225187763,58.5417564191487,61.1742252128676,62.1312374102184,18.785509912736,15.1629451892392,27.1466433149073,18.7192172142586,20.9613162627982,25.554247674552,30.0033082532181,27.6086976700118,25.0316983481616,22.2373546352142,26.6153264884752,25.0873034043481,23.5040183749405,24.3295579138503,26.2480093127153,30.0065025508336,23.0609808630262,24.6923802193542,26.3734976514116,22.3742358604284,24.3437169193645,28.0411773731753,22.4130018550482,27.9065119934071,24.6566576688166,25.0459239359362,25.4269882293154,32.6206442182925,27.8398433384017,19.6399795080208,22.6592884617173,22.2620130168773,25.7815557196904,23.8602735426388,23.3416999287181,27.2293529952361,22.4574344107592,25.7845264857958,30.4148447989461,30.6622072576127,37.7944572061287
|short_description=p1@Surf1
}}

Revision as of 23:32, 13 September 2013

Short description:p1@Surf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Surf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000129682, ENSMUST00000133513, ENSMUST00000147110, ENSMUST00000169815_5end
EntrezGene:Surf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Surf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I526.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I630.94
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I830.60
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E949.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E626.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E844.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A242.27
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A443.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A640.74
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A337.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H242.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I934.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D249.78
GP2+ M cell, pool1.CNhs13228.11845-124H943.07
GP2+ M cell, pool2.CNhs13231.11846-124I140.49
GP2+ M cell, pool3.CNhs13240.11847-124I243.31
Ileum epithelium, pool1.CNhs13199.10252-104B954.92
Ileum epithelium, pool2.CNhs13232.10253-104C141.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C852.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I323.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F548.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F657.18
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F751.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G856.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H156.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H350.26
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G955.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H265.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H464.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D879.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D976.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B357.45
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B758.68
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C228.56
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B853.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C350.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C435.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A226.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I930.47
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.19
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E134.96
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C548.99
Mouse Granule cells, donor1.CNhs12131.11713-123C332.98
Mouse Granule cells, donor2.CNhs12357.11731-123E343.91
Mouse Granule cells, donor3.CNhs12108.11636-122C731.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C633.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D147.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C744.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E756.37
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D259.68
Mouse Microglia, donor1.CNhs12629.11718-123C832.96
Mouse Microglia, donor2.CNhs12634.11736-123E834.96
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F528.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F150.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D561.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F370.10
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D774.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F436.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D842.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E494.92
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5109.74
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I680.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.53
Mouse Schwann, donor1.CNhs12507.11728-123D931.58
Mouse Schwann, donor2.CNhs12573.11746-123F923.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F754.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C445.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C888.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F481.22
Mouse hepatocyte, donor8.CNhs13091.11824-124F680.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A738.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I748.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I841.34
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H134.65
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G227.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B649.56
accessory axillary lymph node, adult.CNhs10475.1063-29H946.35
adrenal gland, adult.CNhs10508.49-24D754.48
adrenal gland, embryo E14.CNhs11038.406-44C527.76
adrenal gland, embryo E16.CNhs11004.1254-43D636.84
adrenal gland, embryo E17.CNhs11043.1263-45I141.51
adrenal gland, embryo E18.CNhs11026.1262-18F545.37
adrenal gland, neonate N00.CNhs11191.1311-23C140.22
adrenal gland, neonate N25.CNhs11223.1377-27I348.63
amnion, adult pregnant day17.5.CNhs10488.583-22A850.92
aorta, adult.CNhs10498.46-23H153.07
bone (os femoris), adult.CNhs10483.56-12G228.31
bone (os femoris), neonate N02.CNhs11227.1985-43F520.54
bone (os femoris), neonate N16.CNhs11225.1525-43A616.56
bone (os femoris), neonate N20.CNhs11195.1350-25C328.61
cecum, adult.CNhs10467.37-13H455.92
cerebellum, adult.CNhs10494.15-8B259.14
cerebellum, neonate N30.CNhs11135.1395-42I257.39
colon, adult.CNhs10468.36-18H742.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C730.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D131.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.86
corpora quadrigemina, adult.CNhs10501.16-22A486.28
corpus striatum, adult.CNhs10487.19-21D871.37
corpus striatum, neonate N00.CNhs11226.630-43F136.31
cortex, adult.CNhs10473.12-14D571.44
cortex, neonate N30.CNhs11107.1392-42F248.84
diencephalon, adult.CNhs10482.20-12F282.28
diencephalon, neonate N30.CNhs11201.1388-42B264.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.59
epididymis, adult.CNhs10490.58-23B263.69
eyeball, adult.CNhs10484.31-12G444.19
eyeball, embryo E12.CNhs11016.345-16C623.03
eyeball, embryo E14.CNhs10521.399-16E230.35
eyeball, embryo E15.CNhs10593.426-16C921.07
eyeball, embryo E17.CNhs11023.1261-18D426.52
eyeball, neonate N00.CNhs11207.633-15C626.26
eyeball, neonate N01.CNhs11140.1532-43E729.98
eyeball, neonate N02.CNhs11205.1551-44G828.11
eyeball, neonate N16.CNhs11188.777-19A245.53
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H223.64
forelimb, embryo E13.CNhs10589.384-1E221.64
forelimb, embryo E14.CNhs10577.413-26A824.99
forelimb, embryo E15.CNhs11007.437-20E726.41
forelimb, embryo E17.CNhs10598.1517-43C423.68
forelimb, embryo E18.CNhs11008.1520-43B530.46
gonad, embryo E13.CNhs11044.1564-45I623.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C828.09
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.99
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D528.98
heart, embryo E11.CNhs10586.331-24E922.16
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I927.37
heart, embryo E14.CNhs10597.403-26D423.44
heart, embryo E15.CNhs11017.431-16C827.74
heart, embryo E16.CNhs11021.457-17C627.00
heart, embryo E17.CNhs11025.479-18E525.58
heart, embryo E18.CNhs11030.1283-20G324.14
heart, neonate N00.CNhs11213.639-21E328.61
heart, neonate N03.CNhs11221.1349-25I225.01
heart, neonate N10.CNhs11118.749-24G135.46
heart, neonate N16.CNhs11209.782-15G130.16
heart, neonate N20.CNhs11127.821-26I642.54
heart, neonate N25.CNhs11196.1351-25D334.25
heart, neonate N30.CNhs11202.1390-42D240.13
hippocampus, adult.CNhs10478.13-16E868.34
hippocampus, neonate N00.CNhs11228.627-43G128.92
intestinal mucosa, adult.CNhs10506.860-29I345.27
intestine, adult.CNhs10496.178-9A339.40
intestine, embryo E12.CNhs11019.1251-16I523.04
intestine, embryo E13.CNhs11010.381-16D520.67
intestine, embryo E15.CNhs10602.976-16D821.78
intestine, embryo E16.CNhs10585.463-22H429.04
intestine, embryo E17.CNhs10582.482-18D337.14
intestine, embryo E18.CNhs10526.1289-20F744.13
intestine, neonate N00.CNhs11126.644-26D139.86
intestine, neonate N01.CNhs11192.1322-23E940.52
intestine, neonate N06.CNhs11102.688-20B845.74
intestine, neonate N07.CNhs11095.720-20F248.15
intestine, neonate N10.CNhs11098.755-23A543.09
intestine, neonate N20.CNhs11187.827-18D134.16
intestine, neonate N25.CNhs11121.1352-25E343.23
intestine, neonate N30.CNhs11131.1384-42G151.58
kidney, embryo E14.CNhs10606.411-4I924.09
kidney, embryo E15.CNhs10997.434-16F819.08
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I226.27
kidney, embryo E18.CNhs11001.1288-20C725.41
kidney, neonate N00.CNhs11214.646-21G724.34
kidney, neonate N10.CNhs11206.758-6D526.81
kidney, neonate N20.CNhs11113.832-19I142.81
kidney, neonate N25.CNhs11122.1353-25F344.12
kidney, neonate N30.CNhs11203.1385-42H150.35
liver, adult pregnant day01.CNhs10466.508-5B272.93
liver, embryo E12.CNhs10601.355-15F823.19
liver, embryo E13.CNhs10524.378-3H619.46
liver, embryo E14.CNhs10594.409-16E125.63
liver, embryo E15.CNhs10520.433-16D722.11
liver, embryo E16.CNhs10523.462-17F528.70
liver, embryo E17.CNhs10510.481-18A335.14
liver, embryo E18.CNhs10579.499-43G426.18
liver, neonate N00.CNhs11117.641-24F426.91
liver, neonate N03.CNhs11123.1345-25G239.54
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H247.26
liver, neonate N10.CNhs11115.751-24B949.30
liver, neonate N20.CNhs11220.823-25A353.04
liver, neonate N25.CNhs11198.1368-26H150.77
liver, neonate N30.CNhs11106.1382-42D160.79
lung, adult.CNhs10474.28-22B145.82
lung, embryo E12.CNhs10522.354-16G223.50
lung, embryo E14.CNhs10604.404-26F814.18
lung, embryo E15.CNhs11020.432-17C518.67
lung, embryo E16.CNhs10998.458-17B622.30
lung, embryo E17.CNhs10605.480-44A621.44
lung, embryo E18.CNhs10583.1287-20I624.99
lung, neonate N00.CNhs11224.640-42C625.17
lung, neonate N06.CNhs11212.683-20E529.16
lung, neonate N07.CNhs11111.715-19A328.79
lung, neonate N10.CNhs11219.750-23E627.75
lung, neonate N20.CNhs11109.822-18A443.10
lung, neonate N25.CNhs11119.1359-25C740.75
lung, neonate N30.CNhs11133.1394-42H243.83
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A145.24
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A141.34
mammary gland, adult lactating day02.CNhs10480.595-22B622.13
mammary gland, adult pregnant day19.CNhs10476.588-5H232.28
medulla oblongata, adult.CNhs10477.17-12C290.87
medulla oblongata, neonate N30.CNhs11200.1396-42A369.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C236.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.77
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E223.43
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.17
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I957.52
ovary, adult.CNhs10507.91-2I729.52
ovary, embryo E18.CNhs11040.505-44H731.34
ovary, neonate N00.CNhs11217.1299-22I427.85
oviduct, adult pregnant day01.CNhs10500.988-6G640.75
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F428.89
pancreas, embryo E15.CNhs11042.1556-45F226.60
pancreas, embryo E16.CNhs11003.460-26E534.14
pancreas, embryo E17.CNhs10599.1558-45G326.28
pancreas, embryo E18.CNhs10580.1535-43I723.67
pancreas, neonate N00.CNhs11105.645-26G933.08
pancreas, neonate N01.CNhs11138.1531-43D730.54
pancreas, neonate N02.CNhs11139.1539-43D831.73
pancreas, neonate N16.CNhs11136.787-43B628.44
pancreas, neonate N25.CNhs11094.1555-45E230.57
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G848.00
pituitary gland, embryo E12.CNhs11018.346-16E623.23
pituitary gland, embryo E13.CNhs11009.370-44C734.41
pituitary gland, embryo E14.CNhs11037.398-44A527.01
pituitary gland, embryo E15.CNhs10592.427-16B927.84
pituitary gland, embryo E16.CNhs11036.449-43F631.57
pituitary gland, embryo E17.CNhs11039.1265-44F533.40
pituitary gland, neonate N00.CNhs11190.1308-22E949.63
placenta, adult pregnant day10.CNhs10472.539-13I728.63
placenta, adult pregnant day17.CNhs10464.577-18G351.90
prostate, adult.CNhs10470.859-1F878.51
skin, adult.CNhs10492.30-1C329.68
skin, neonate N00.CNhs11124.650-25G427.13
skin, neonate N03.CNhs11215.662-22H320.08
skin, neonate N06.CNhs11097.693-20I521.13
skin, neonate N10.CNhs11108.762-6C420.35
small intestine, neonate N16.CNhs11114.790-21I133.23
spinal cord, adult.CNhs10505.24-13C980.85
spleen, adult.CNhs10465.25-2G231.95
spleen, embryo E16.CNhs11035.461-43C126.00
spleen, embryo E18.CNhs11011.1271-21F230.93
spleen, neonate N10.CNhs11116.752-24D127.50
spleen, neonate N20.CNhs11112.824-19H123.92
spleen, neonate N25.CNhs11099.1354-25G331.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.87
stomach, adult.CNhs10503.33-1H656.33
stomach, embryo E12.CNhs10588.356-43E316.92
stomach, embryo E15.CNhs10603.1252-16G821.76
stomach, embryo E16.CNhs11022.459-17D426.25
stomach, embryo E17.CNhs11006.1035-18D528.44
stomach, embryo E18.CNhs10999.1286-20C635.16
stomach, neonate N03.CNhs11193.1340-24B829.00
stomach, neonate N07.CNhs11210.718-18A934.38
stomach, neonate N25.CNhs11104.1355-25E438.22
stomach, neonate N30.CNhs11134.1386-42I183.99
submandibular gland, adult.CNhs10469.59-29C137.28
testis, adult.CNhs10504.57-7G528.75
testis, embryo E13.CNhs11031.389-23F520.18
testis, embryo E15.CNhs11034.443-27C522.01
testis, embryo E16.CNhs11033.470-26G524.31
testis, embryo E17.CNhs11029.486-18I522.60
testis, embryo E18.CNhs11027.503-18G526.36
testis, neonate N00.CNhs11189.1300-22B732.51
testis, neonate N07.CNhs11222.726-26I421.48
testis, neonate N10.CNhs11204.763-44D922.75
testis, neonate N20.CNhs11110.839-18H324.40
testis, neonate N30.CNhs11130.1391-42E220.16
thymus, adult.CNhs10471.38-12B536.66
thymus, embryo E14.CNhs11041.402-44I426.35
thymus, embryo E15.CNhs11005.430-45I228.66
thymus, embryo E16.CNhs11002.456-26C533.26
thymus, embryo E17.CNhs10581.478-18C129.00
thymus, embryo E18.CNhs10595.1273-19G430.00
thymus, neonate N02.CNhs11181.1541-43F829.93
thymus, neonate N03.CNhs11137.2104-43C731.75
thymus, neonate N06.CNhs11197.681-26C430.09
thymus, neonate N07.CNhs11211.713-19D331.02
thymus, neonate N10.CNhs11194.748-24E435.89
thymus, neonate N20.CNhs11186.820-7A233.14
thymus, neonate N25.CNhs11125.1362-25G734.06
thymus, neonate N30.CNhs11132.1393-42G242.43
tongue, adult.CNhs10499.32-1B428.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.62
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.94
urinary bladder, adult.CNhs10481.879-12E447.52
uterus, adult pregnant day19.CNhs10497.590-15F538.85
uterus, adult.CNhs10509.92-27E539.93
vagina, adult.CNhs10502.89-27D527.01
vesicular gland, adult.CNhs10491.51-27F855.67
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A146.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A346.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.02
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A461.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.21
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A654.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A861.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A962.13
whole body, embryo E11.CNhs11014.324-5I818.79
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H227.15
whole body, embryo E14.5.CNhs10578.420-27D218.72
whole body, embryo E14.CNhs10519.395-14B120.96
whole body, embryo E16.CNhs10514.453-14F225.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G528.04
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.86
whole body, embryo E17.5.CNhs10513.490-9F923.34
whole body, embryo E17.CNhs10517.475-3I527.23
whole body, embryo E18.CNhs10516.493-3B322.46
whole body, neonate N00.CNhs10525.657-19C225.78
whole body, neonate N01.CNhs10576.659-23C630.41
whole body, neonate N06.CNhs10515.692-21D130.66
whole body, neonate N10.CNhs10518.761-6B437.79





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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