FFCP PHASE1:Mm9::chr2:27741904..27741915,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12831|HGNC=|MCL_coexpression_id=475|UniProt=O88207,B1AWB9|association_with_transcript=-29bp_to_ENSMUST00000028280,NM_015734,uc008ixt.2_5end|description=CAGE_peak_4_at_Col5a1_5end|id=chr2:27741904..27741915,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.811015449756117,1.46837401729345,8.60630478782843,1.52617609466313,2.41654801007919,2.52758868796568,3.3596741190087,0,0,0,0,3.08711323243136,8.02293631828519,3.6097046459421,0.202316460859598,0,0.633831403506179,7.11573517345177,11.5608323494448,2.6996991518442,0,2.1314403448383,5.69240209984969,2.68952813725088,0.207379224616955,0.675029691658453,0,0.856952953211411,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.854230084794618,0.186399445825301,2.19605960666234,2.26714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,2.89731548382698,1.55871602761721,3.18005617059306,2.95771181531029,2.56652954828636,12.7402619853323,14.2213340630666,0,0,0,0,0,0.445326417194474,1.56136794089522,1.21786191324856,1.38369298353635,0.904335843315735,1.99900802130698,1.25666591329675,0.741584903203122,0.289198713839823,0,3.39710384889559,1.10420759230197,1.93950101254089,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.511430914660661,0,0.162241263067758,5.49932564791708,0.870848794270651,0,0,1.17108398666433,3.44853156650209,1.0803727788321,1.80845781402858,1.49680298132921,0.768682321709099,1.40552586839593,0,1.29340795759705,4.34943984385984,4.04687585577082,5.04150184583422,2.78047249225598,3.1342694986995,3.2925141825271,1.59227413454795,0,0.257347907114715,0,2.07125772535502,0.938104239924385,2.34080679899319,1.65721314909647,0.787056926989615,1.23413690309903,0.465067889500816,1.07309360559848,1.75148013550754,1.81015834904829,0.32833492815819,0.405344047729279,1.16959989940266,0.439100230582101,0.268412837520744,0,0,0,0,1.2797295032114,1.85789337488351,1.67527699718721,1.81515172161008,1.11189021922435,1.33157938278791,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0,1.51734320762465,1.48523066392647,1.1270773567308,0.814605311381257,1.55161989734101,1.54298803758701,0.822074982615345,0.147610147979602,0.31399745568275,0.370191491765402,0,1.00107063429656,0.786235980452812,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.575392274901621,0.324270453550071,0,0,0.744281895337007,0,0.757736633841335,0,0.482443521363367,0.369506380333209,2.08440552947533,1.95557971730431,1.01847051465113,1.87752198630802,1.84256883185997,1.42826184531608,1.56106918286239,0.472905432318573,2.21464689648775,1.59454768657487,0.327726629431476,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.504941854408746,1.89304931649754,0,0.861693590931196,0.955875191810208,1.78238939265915,0.283076530788832,0.404810701674894,2.33804686329049,1.58115111178609,0,0.283880170416537,3.38324646967785,6.02681749608232,1.31976098378028,0,0.485561272309963,1.51161778482376,0.754420319023592,2.65771703592696,2.45948118355142,2.32585463851399,1.09060118843252,1.06949213515416,0,0,0,0,0.720244376125241,1.81102157295856,1.71469628025274,1.06404140185364,1.07021290561242,1.15184314421485,0.913394847343798,0.704015124191131,0.63549621259146,0,0,2.74489525383039,2.11095237248546,1.43246812803764,0.820704498725306,0.291480836629851,0,0,1.857481811669,0.740778109478847,0,0,0.457556346413045,0,0,0,0,2.05618395827738,1.42323626988794,0.972048067396211,1.46361807210128,0.436725127492355,1.34864346384821,1.23980183588004,0.785267825952089,0.129614973291793,0,0,1.64468200648377,1.48912641411388,1.94451188344048,1.42075805825504,1.01373675294467,3.40335992072686,1.95306577265925,0.629156066554265,0.241584120826006,0,0,1.62180172232131,0.718976700153791,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0,0,0,0,0.453460767230423,0.887943813496259,0.0897138566094757,0.839423081820392,0.386379188064381,1.50145980360946,0.73260649706906,0.214368379079066,0,1.12950368523413,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0.51776031175182,0.31136204275253,1.59609949360412,2.21953687480374,1.45864030240976,0.628839487883947,1.2869045591501,0.666740183404846,0.824140228955577,2.24643446714271,0.252697211763798,0.760437899670719,1.50901073108861,2.1537546718073,1.53660365771686,2.12511235135769,3.33405583898152,2.31768651889711,1.92909220463705,2.06042950401653,1.76638704161277,1.37147700954166,1.24233064311536,1.43061713968393,1.59881058295561,1.03520318456864,1.86152137361688,1.4634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| ||
|EntrezGene=12831 | |||
|HGNC= | |||
|MCL_coexpression_id=475 | |||
|UniProt=O88207,B1AWB9 | |||
|association_with_transcript=-29bp_to_ENSMUST00000028280,NM_015734,uc008ixt.2_5end | |||
|description=CAGE_peak_4_at_Col5a1_5end | |||
|id=chr2:27741904..27741915,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.811015449756117,1.46837401729345,8.60630478782843,1.52617609466313,2.41654801007919,2.52758868796568,3.3596741190087,0,0,0,0,3.08711323243136,8.02293631828519,3.6097046459421,0.202316460859598,0,0.633831403506179,7.11573517345177,11.5608323494448,2.6996991518442,0,2.1314403448383,5.69240209984969,2.68952813725088,0.207379224616955,0.675029691658453,0,0.856952953211411,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.854230084794618,0.186399445825301,2.19605960666234,2.26714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,2.89731548382698,1.55871602761721,3.18005617059306,2.95771181531029,2.56652954828636,12.7402619853323,14.2213340630666,0,0,0,0,0,0.445326417194474,1.56136794089522,1.21786191324856,1.38369298353635,0.904335843315735,1.99900802130698,1.25666591329675,0.741584903203122,0.289198713839823,0,3.39710384889559,1.10420759230197,1.93950101254089,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.511430914660661,0,0.162241263067758,5.49932564791708,0.870848794270651,0,0,1.17108398666433,3.44853156650209,1.0803727788321,1.80845781402858,1.49680298132921,0.768682321709099,1.40552586839593,0,1.29340795759705,4.34943984385984,4.04687585577082,5.04150184583422,2.78047249225598,3.1342694986995,3.2925141825271,1.59227413454795,0,0.257347907114715,0,2.07125772535502,0.938104239924385,2.34080679899319,1.65721314909647,0.787056926989615,1.23413690309903,0.465067889500816,1.07309360559848,1.75148013550754,1.81015834904829,0.32833492815819,0.405344047729279,1.16959989940266,0.439100230582101,0.268412837520744,0,0,0,0,1.2797295032114,1.85789337488351,1.67527699718721,1.81515172161008,1.11189021922435,1.33157938278791,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0,1.51734320762465,1.48523066392647,1.1270773567308,0.814605311381257,1.55161989734101,1.54298803758701,0.822074982615345,0.147610147979602,0.31399745568275,0.370191491765402,0,1.00107063429656,0.786235980452812,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.575392274901621,0.324270453550071,0,0,0.744281895337007,0,0.757736633841335,0,0.482443521363367,0.369506380333209,2.08440552947533,1.95557971730431,1.01847051465113,1.87752198630802,1.84256883185997,1.42826184531608,1.56106918286239,0.472905432318573,2.21464689648775,1.59454768657487,0.327726629431476,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.504941854408746,1.89304931649754,0,0.861693590931196,0.955875191810208,1.78238939265915,0.283076530788832,0.404810701674894,2.33804686329049,1.58115111178609,0,0.283880170416537,3.38324646967785,6.02681749608232,1.31976098378028,0,0.485561272309963,1.51161778482376,0.754420319023592,2.65771703592696,2.45948118355142,2.32585463851399,1.09060118843252,1.06949213515416,0,0,0,0,0.720244376125241,1.81102157295856,1.71469628025274,1.06404140185364,1.07021290561242,1.15184314421485,0.913394847343798,0.704015124191131,0.63549621259146,0,0,2.74489525383039,2.11095237248546,1.43246812803764,0.820704498725306,0.291480836629851,0,0,1.857481811669,0.740778109478847,0,0,0.457556346413045,0,0,0,0,2.05618395827738,1.42323626988794,0.972048067396211,1.46361807210128,0.436725127492355,1.34864346384821,1.23980183588004,0.785267825952089,0.129614973291793,0,0,1.64468200648377,1.48912641411388,1.94451188344048,1.42075805825504,1.01373675294467,3.40335992072686,1.95306577265925,0.629156066554265,0.241584120826006,0,0,1.62180172232131,0.718976700153791,0.389762468933385,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0,0,0,0,0.453460767230423,0.887943813496259,0.0897138566094757,0.839423081820392,0.386379188064381,1.50145980360946,0.73260649706906,0.214368379079066,0,1.12950368523413,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0.51776031175182,0.31136204275253,1.59609949360412,2.21953687480374,1.45864030240976,0.628839487883947,1.2869045591501,0.666740183404846,0.824140228955577,2.24643446714271,0.252697211763798,0.760437899670719,1.50901073108861,2.1537546718073,1.53660365771686,2.12511235135769,3.33405583898152,2.31768651889711,1.92909220463705,2.06042950401653,1.76638704161277,1.37147700954166,1.24233064311536,1.43061713968393,1.59881058295561,1.03520318456864,1.86152137361688,1.46342378298218,0.789209134313529,1.22223702461276,0.561142271657738,2.84724043498018,1.57607171800902,1.22769312950907,0.929621047115796,4.24394544158511,4.49659040288303,2.33931608445408,1.50409737833809,2.67803664896381,2.20591419119516,2.08681052058379 | |||
|short_description=p4@Col5a1 | |||
}} | |||
Revision as of 23:34, 13 September 2013
| Short description: | p4@Col5a1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Col5a1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:475 |
| Association with transcript: | -29bp_to_ENSMUST00000028280, NM_015734, uc008ixt.2_5end |
| EntrezGene: | Col5a1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
