FFCP PHASE1:Mm9::chr2:4480648..4480675,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209630|HGNC=|UniProt=Q3TB04|association_with_transcript=-124bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end|description=CAGE_peak_6_at_Frmd4a_5end|id=chr2:4480648..4480675,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,1.87e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.17e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.07e-08,11;UBERON:0002410,1.87e-07,9|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0.467225281191051,0.645616617207881,0,0.234064526321993,0,0,0.513602189793617,0.699363219351979,7.66152452176024,9.71881283471165,23.785103856357,0.315462165358238,1.50825876966313,1.27316895539409,0.340173160604279,1.09220046320974,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0.190023419456374,0,0,4.44521471421742,1.84519436275371,0,1.1554064790051,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0,0,0.485510353031154,0.503587271902309,0.811015449756117,0.183546752161682,0,1.09012578190223,1.75748946187577,1.55543919259427,0.979904951377538,0,0.503347818173209,0.725362142011344,5.04140698713696,1.02903774414379,0.573066879877513,0,1.21389876515759,0,1.26766280701236,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0.299600110518405,0.768436610643109,1.45165457231869,0.810035629990144,1.89292465216244,0.285650984403804,0.441737081903227,0.61245399607477,1.15014565221884,0.919218786610021,0,0,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.61119299110724,0.589257170947335,0.711858403995515,0.372798891650601,7.42116694665204,4.08086424576642,1.73918693221007,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.842666520790511,0.340860645156116,0,0.70667914902068,1.54927761754349,0,0,0,0,0,0.505524445014783,0.45673551887624,4.91981978929626,1.1875371125186,1.56136794089522,0.304465478312141,1.15307748628029,0.753613202763113,1.52865319276416,0.376999773989026,0.247194967734374,0.433798070759735,2.65383165584962,1.61766849947409,3.97514733228708,2.90925151881133,1.86391761218122,0.585561594023094,0.41889341362691,0.510914110417183,0.359445373517761,0.599902730993408,0.635351135365324,0.299581278809645,0,1.13088916901578,0,0.255715457330331,0,0.324482526135515,0.407357455401265,2.36373244159177,0.252722758433675,0.631325567659422,1.30120442962704,2.75882525320168,4.32149111532838,3.76762044589288,5.64702942956021,5.89323113310309,2.34254311399322,0.517406741478031,6.03590380211958,2.26927296201383,2.46331573829528,0.657587197282725,1.66828349535359,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0.284163499395593,0.621377317606506,2.34526059981096,1.08037236876609,1.42046841351126,1.57411385397923,0.771335564436891,1.16266972375204,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,1.05389452409612,0.877199924551994,0.878200461164203,0.536825675041487,0.210289948564127,0.823236899034275,0.330418782983798,0,2.55945900642281,3.0190767341857,0.77320476793256,0.80673409849337,1.11189021922435,1.14135375667535,1.42358718463353,0.658795818896044,0.502670417600539,1.79060824837036,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,1.51734320762465,1.94222471436539,6.76246414038483,2.03651327845314,2.90928730751439,1.61312385747733,0.885311519739602,1.18088118383682,2.04098346193787,1.23397163921801,0.296452627087149,4.83850806576673,5.70021085828289,5.39669069723649,9.53442570525964,8.68237775108701,9.42115651591253,6.90470729881945,8.59316701907687,1.37280706594041,0,1.11642284300551,1.24815069245824,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.488894929326078,1.18821560042632,0.938760993154008,0.837531287209079,2.38043640886014,1.95133647857799,1.7339865851681,1.32878813789265,1.59454768657487,2.13022309130459,1.55416483679306,1.01254341007058,1.50791283939272,0,0,0.551873492609465,0.642202359951168,0.468846746368813,0.163934945376675,0.252470927204373,8.51872192423893,7.80877488593277,10.5557464889071,4.77937595905104,2.89638276307112,2.26461224631066,16.5972387686707,11.6902343164525,11.8586333383957,0.321321316421807,1.13552068166615,0.534196811001766,0.651547837414304,0.989820737835213,1.32745138339963,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,1.80899805217755,0.727067458955011,0.712994756769443,0,0,1.03135543248187,1.70219802876894,1.98067203434441,1.94038025674132,3.42939256050548,2.83744373827638,1.96205699362278,1.97458824722545,1.8267896946876,1.17335854031855,1.48282449604674,0,1.97863503529776,1.93757312035087,1.68876189798836,3.58117032009409,3.11867709515616,0.291480836629851,0.741701208042039,6.32222258952055,1.65109494370578,3.51869602002452,6.02779062415011,7.92826520781946,8.46479240864134,0.509935289981566,1.39951452323658,1.52019971184866,0,1.10717597753397,2.03319467126849,0.432021363287205,0.627264888043406,1.09181281873089,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| ||
|EntrezGene=209630 | |||
|HGNC= | |||
|UniProt=Q3TB04 | |||
|association_with_transcript=-124bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end | |||
|description=CAGE_peak_6_at_Frmd4a_5end | |||
|id=chr2:4480648..4480675,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.87e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.17e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.07e-08,11;UBERON:0002410,1.87e-07,9 | |||
|phase1_expression=0.960893082628764,0,0,0,0.500895729946347,0,0.467225281191051,0.645616617207881,0,0.234064526321993,0,0,0.513602189793617,0.699363219351979,7.66152452176024,9.71881283471165,23.785103856357,0.315462165358238,1.50825876966313,1.27316895539409,0.340173160604279,1.09220046320974,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0.646413698057667,0.190023419456374,0,0,4.44521471421742,1.84519436275371,0,1.1554064790051,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0,0,0.485510353031154,0.503587271902309,0.811015449756117,0.183546752161682,0,1.09012578190223,1.75748946187577,1.55543919259427,0.979904951377538,0,0.503347818173209,0.725362142011344,5.04140698713696,1.02903774414379,0.573066879877513,0,1.21389876515759,0,1.26766280701236,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0.299600110518405,0.768436610643109,1.45165457231869,0.810035629990144,1.89292465216244,0.285650984403804,0.441737081903227,0.61245399607477,1.15014565221884,0.919218786610021,0,0,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.61119299110724,0.589257170947335,0.711858403995515,0.372798891650601,7.42116694665204,4.08086424576642,1.73918693221007,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.842666520790511,0.340860645156116,0,0.70667914902068,1.54927761754349,0,0,0,0,0,0.505524445014783,0.45673551887624,4.91981978929626,1.1875371125186,1.56136794089522,0.304465478312141,1.15307748628029,0.753613202763113,1.52865319276416,0.376999773989026,0.247194967734374,0.433798070759735,2.65383165584962,1.61766849947409,3.97514733228708,2.90925151881133,1.86391761218122,0.585561594023094,0.41889341362691,0.510914110417183,0.359445373517761,0.599902730993408,0.635351135365324,0.299581278809645,0,1.13088916901578,0,0.255715457330331,0,0.324482526135515,0.407357455401265,2.36373244159177,0.252722758433675,0.631325567659422,1.30120442962704,2.75882525320168,4.32149111532838,3.76762044589288,5.64702942956021,5.89323113310309,2.34254311399322,0.517406741478031,6.03590380211958,2.26927296201383,2.46331573829528,0.657587197282725,1.66828349535359,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0.284163499395593,0.621377317606506,2.34526059981096,1.08037236876609,1.42046841351126,1.57411385397923,0.771335564436891,1.16266972375204,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,1.05389452409612,0.877199924551994,0.878200461164203,0.536825675041487,0.210289948564127,0.823236899034275,0.330418782983798,0,2.55945900642281,3.0190767341857,0.77320476793256,0.80673409849337,1.11189021922435,1.14135375667535,1.42358718463353,0.658795818896044,0.502670417600539,1.79060824837036,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,1.51734320762465,1.94222471436539,6.76246414038483,2.03651327845314,2.90928730751439,1.61312385747733,0.885311519739602,1.18088118383682,2.04098346193787,1.23397163921801,0.296452627087149,4.83850806576673,5.70021085828289,5.39669069723649,9.53442570525964,8.68237775108701,9.42115651591253,6.90470729881945,8.59316701907687,1.37280706594041,0,1.11642284300551,1.24815069245824,0.252578877947112,0.179397413521912,0.482443521363367,0.554259570499814,0.189491411770485,0.488894929326078,1.18821560042632,0.938760993154008,0.837531287209079,2.38043640886014,1.95133647857799,1.7339865851681,1.32878813789265,1.59454768657487,2.13022309130459,1.55416483679306,1.01254341007058,1.50791283939272,0,0,0.551873492609465,0.642202359951168,0.468846746368813,0.163934945376675,0.252470927204373,8.51872192423893,7.80877488593277,10.5557464889071,4.77937595905104,2.89638276307112,2.26461224631066,16.5972387686707,11.6902343164525,11.8586333383957,0.321321316421807,1.13552068166615,0.534196811001766,0.651547837414304,0.989820737835213,1.32745138339963,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,1.80899805217755,0.727067458955011,0.712994756769443,0,0,1.03135543248187,1.70219802876894,1.98067203434441,1.94038025674132,3.42939256050548,2.83744373827638,1.96205699362278,1.97458824722545,1.8267896946876,1.17335854031855,1.48282449604674,0,1.97863503529776,1.93757312035087,1.68876189798836,3.58117032009409,3.11867709515616,0.291480836629851,0.741701208042039,6.32222258952055,1.65109494370578,3.51869602002452,6.02779062415011,7.92826520781946,8.46479240864134,0.509935289981566,1.39951452323658,1.52019971184866,0,1.10717597753397,2.03319467126849,0.432021363287205,0.627264888043406,1.09181281873089,0.944050424693745,0.41326727862668,0.26175594198403,1.16653475962614,3.10669656543463,0,1.19613236835183,0.992750942742586,0.583353565032143,1.29159823477731,2.19642963138012,2.8165737274981,1.43224823328345,0.838874755405687,0.483168241652012,0.288030006257865,2.21207784439725,7.9062833963164,10.2710957164827,4.93699127315621,4.47566739168704,3.17890167650024,2.28371354087941,2.80610101631697,1.41353029927407,1.82896335972,1.41156659191577,2.43644701849381,2.02044867444692,3.03879945672079,0.680191150845634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| |||
|short_description=p6@Frmd4a | |||
}} | |||
Revision as of 00:02, 14 September 2013
| Short description: | p6@Frmd4a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Frmd4a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -124bp_to_ENSMUST00000153160, NM_001177844, uc008iet.2, uc008ieu.2, uc008iev.2_5end |
| EntrezGene: | Frmd4a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 1.87e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 1.07e-08 | 11 |
| autonomic nervous system | 1.87e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
