FFCP PHASE1:Mm9::chr2:60719391..60719411,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56878|HGNC=|MCL_coexpression_id=3358|UniProt=E9PZ21,Q3TTX8,Q3UKR8,Q91W59,Q3TPK8|association_with_transcript=83bp_to_ENSMUST00000164147,NM_001141931,NM_001141932,uc008jur.2,uc008jus.2,uc008juv.1_5end|description=CAGE_peak_5_at_Rbms1_5end|id=chr2:60719391..60719411,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005178,9.42e-07,17;UBERON:0005181,9.42e-07,17;UBERON:0002224,9.42e-07,17;UBERON:0000915,9.42e-07,17;UBERON:0008947,9.42e-07,17;UBERON:0003258,9.42e-07,17|phase1_expression=0.80074423552397,2.44282785347553,1.81999695755814,0.30246421130683,0,1.00727563147134,0.700837921786577,1.80772652818207,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,1.02720437958723,1.57356724354195,0.333109761815663,0,0,0.473193248037357,1.64537320326887,0,1.10556277196391,0.397163804803541,1.30599894569468,0.799962113967033,0.68822784320151,0.57423196411502,0.86152399231815,1.50829862880122,0.570070258369122,0,0.886922042621219,0,0,0,0,0,0.204169356262369,2.09265815368454,2.3440060335714,1.0470474879476,2.35292595212406,0.683045484958446,1.45653105909346,4.02869817521847,3.14268486780495,2.0190142737785,4.69434806608824,0.436050312760893,0.878744730937887,0.58328969722285,1.1198913730029,0,0,1.45072428402269,2.01656279485478,6.43148590089868,4.87106847895886,5.15672092277442,1.21389876515759,0.528990979272033,0.633831403506179,2.37191172448392,2.66788438833342,1.3498495759221,0.988866362566974,2.1314403448383,0.299600110518405,0.768436610643109,0.207379224616955,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0.122490799214954,0,0,0,0.510749352340751,0.614426133024974,0.263772575460388,0.182975287204819,0.52091337055676,1.11673199600552,1.68828783009504,0.45839474333043,0.589257170947335,1.28134512719193,1.4911955666024,4.92220256665696,3.32514864469856,2.6087803983151,1.72084775396277,2.03991400112325,1.61910957491345,1.29955283489534,0.448026887097336,0.561777680527007,2.89731548382698,1.03914401841148,0,0.985903938436763,5.13305909657271,15.2883143823987,0,3.68034769719064,2.28023878927589,3.0331466700887,1.1418387971906,1.8125651855302,0.890652834388949,1.73485326766136,1.52232739156071,0.230615497256059,1.20578112442098,2.3517741427141,0.502666365318702,9.39340877390621,1.44599356919912,3.5384422077995,1.45590164952668,0.220841518460394,1.45462575940567,1.86391761218122,0.292780797011547,0.209446706813455,0,0.479260498023681,0,0.254140454146129,0.748953197024114,0.457500602818626,0.125654352112864,1.04294592115366,0.767146371990992,1.0389402227978,0.648965052271031,1.83310854930569,0.746441823660558,0.252722758433675,1.05220927943237,1.17108398666433,0.459804208866946,1.0803727788321,1.05493372485001,0.748401490664606,0.12811372028485,0.281105173679186,0.517406741478031,0.862271971731369,1.89106080167819,1.58356011747554,0.876782929710299,1.66828349535359,3.48252166522167,5.55611768301447,0.796137067273973,0.702213187313235,0,0.568326998791185,2.27838349789052,1.64168241986767,1.08037236876609,2.3674473558521,1.77087808572663,0.925602677324269,1.16266972375204,1.07309360559848,0.934122738937356,0.987359099480883,0.492502392237286,0.972825714550269,1.16959989940266,1.3173006917463,0.805238512562231,0.630869845692382,0.308713837137853,1.32167513193519,0.528901133327089,1.06644125267617,2.09013004674395,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0.949058123089023,0.494096864172033,0.502670417600539,1.1937388322469,0.779856348476481,0.898819408654221,2.16138049874694,0.398282546508734,0.758671603812327,1.25673363870702,1.1270773567308,1.22190796707189,1.55161989734101,1.54298803758701,1.70738650235495,0.590440591918409,0.470996183524124,0.493588655687202,0.296452627087149,1.50160595144485,2.16214894624523,0.449724224769707,2.02860121388503,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,1.37280706594041,1.43768206527355,1.48856379067401,0.936113019343682,0.757736633841335,0.538192240565737,1.4473305640901,4.24932337383191,0.189491411770485,1.14075483509418,1.18821560042632,2.58159273117352,3.51763140627813,4.04674189506223,5.26860849216057,2.52216230569906,2.6575762757853,3.34855014180723,2.94953966488328,3.45369963731791,2.60368305446721,1.50791283939272,1.63171705145613,1.47529281905711,0.827810238914197,0.321101179975584,0.820481806145422,3.93443868904021,0.252470927204373,2.2085575359138,0.780877488593277,1.29254038639679,0.716906393857656,2.00518806674155,3.11384183867716,2.83367491172426,3.50707029493574,3.55759000151871,0.321321316421807,1.27746076687442,1.06839362200353,1.95464351224291,1.31976098378028,0,0.728341908464944,0.604647113929502,0.943025398779491,0.885905678642318,0.614870295887855,1.55056975900933,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.720244376125241,1.4229455216103,0.643011105094777,1.59606210278046,0.713475270408282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| ||
|EntrezGene=56878 | |||
|HGNC= | |||
|MCL_coexpression_id=3358 | |||
|UniProt=E9PZ21,Q3TTX8,Q3UKR8,Q91W59,Q3TPK8 | |||
|association_with_transcript=83bp_to_ENSMUST00000164147,NM_001141931,NM_001141932,uc008jur.2,uc008jus.2,uc008juv.1_5end | |||
|description=CAGE_peak_5_at_Rbms1_5end | |||
|id=chr2:60719391..60719411,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,9.42e-07,17;UBERON:0005181,9.42e-07,17;UBERON:0002224,9.42e-07,17;UBERON:0000915,9.42e-07,17;UBERON:0008947,9.42e-07,17;UBERON:0003258,9.42e-07,17 | |||
|phase1_expression=0.80074423552397,2.44282785347553,1.81999695755814,0.30246421130683,0,1.00727563147134,0.700837921786577,1.80772652818207,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,1.02720437958723,1.57356724354195,0.333109761815663,0,0,0.473193248037357,1.64537320326887,0,1.10556277196391,0.397163804803541,1.30599894569468,0.799962113967033,0.68822784320151,0.57423196411502,0.86152399231815,1.50829862880122,0.570070258369122,0,0.886922042621219,0,0,0,0,0,0.204169356262369,2.09265815368454,2.3440060335714,1.0470474879476,2.35292595212406,0.683045484958446,1.45653105909346,4.02869817521847,3.14268486780495,2.0190142737785,4.69434806608824,0.436050312760893,0.878744730937887,0.58328969722285,1.1198913730029,0,0,1.45072428402269,2.01656279485478,6.43148590089868,4.87106847895886,5.15672092277442,1.21389876515759,0.528990979272033,0.633831403506179,2.37191172448392,2.66788438833342,1.3498495759221,0.988866362566974,2.1314403448383,0.299600110518405,0.768436610643109,0.207379224616955,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0.122490799214954,0,0,0,0.510749352340751,0.614426133024974,0.263772575460388,0.182975287204819,0.52091337055676,1.11673199600552,1.68828783009504,0.45839474333043,0.589257170947335,1.28134512719193,1.4911955666024,4.92220256665696,3.32514864469856,2.6087803983151,1.72084775396277,2.03991400112325,1.61910957491345,1.29955283489534,0.448026887097336,0.561777680527007,2.89731548382698,1.03914401841148,0,0.985903938436763,5.13305909657271,15.2883143823987,0,3.68034769719064,2.28023878927589,3.0331466700887,1.1418387971906,1.8125651855302,0.890652834388949,1.73485326766136,1.52232739156071,0.230615497256059,1.20578112442098,2.3517741427141,0.502666365318702,9.39340877390621,1.44599356919912,3.5384422077995,1.45590164952668,0.220841518460394,1.45462575940567,1.86391761218122,0.292780797011547,0.209446706813455,0,0.479260498023681,0,0.254140454146129,0.748953197024114,0.457500602818626,0.125654352112864,1.04294592115366,0.767146371990992,1.0389402227978,0.648965052271031,1.83310854930569,0.746441823660558,0.252722758433675,1.05220927943237,1.17108398666433,0.459804208866946,1.0803727788321,1.05493372485001,0.748401490664606,0.12811372028485,0.281105173679186,0.517406741478031,0.862271971731369,1.89106080167819,1.58356011747554,0.876782929710299,1.66828349535359,3.48252166522167,5.55611768301447,0.796137067273973,0.702213187313235,0,0.568326998791185,2.27838349789052,1.64168241986767,1.08037236876609,2.3674473558521,1.77087808572663,0.925602677324269,1.16266972375204,1.07309360559848,0.934122738937356,0.987359099480883,0.492502392237286,0.972825714550269,1.16959989940266,1.3173006917463,0.805238512562231,0.630869845692382,0.308713837137853,1.32167513193519,0.528901133327089,1.06644125267617,2.09013004674395,1.03093969057675,1.00841762311671,0.889512175379481,0.570676878337677,0.949058123089023,0.494096864172033,0.502670417600539,1.1937388322469,0.779856348476481,0.898819408654221,2.16138049874694,0.398282546508734,0.758671603812327,1.25673363870702,1.1270773567308,1.22190796707189,1.55161989734101,1.54298803758701,1.70738650235495,0.590440591918409,0.470996183524124,0.493588655687202,0.296452627087149,1.50160595144485,2.16214894624523,0.449724224769707,2.02860121388503,1.4470629585145,0.763877555344259,0.863088412352432,1.78348749452539,1.37280706594041,1.43768206527355,1.48856379067401,0.936113019343682,0.757736633841335,0.538192240565737,1.4473305640901,4.24932337383191,0.189491411770485,1.14075483509418,1.18821560042632,2.58159273117352,3.51763140627813,4.04674189506223,5.26860849216057,2.52216230569906,2.6575762757853,3.34855014180723,2.94953966488328,3.45369963731791,2.60368305446721,1.50791283939272,1.63171705145613,1.47529281905711,0.827810238914197,0.321101179975584,0.820481806145422,3.93443868904021,0.252470927204373,2.2085575359138,0.780877488593277,1.29254038639679,0.716906393857656,2.00518806674155,3.11384183867716,2.83367491172426,3.50707029493574,3.55759000151871,0.321321316421807,1.27746076687442,1.06839362200353,1.95464351224291,1.31976098378028,0,0.728341908464944,0.604647113929502,0.943025398779491,0.885905678642318,0.614870295887855,1.55056975900933,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.720244376125241,1.4229455216103,0.643011105094777,1.59606210278046,0.713475270408282,0.822745103010605,1.2178597964584,12.6722722354404,8.47328283455281,0.661585194164886,5.60613260001032,7.58882805470756,6.03129249281559,2.50681922406587,3.11867709515616,0.291480836629851,0.556275906031529,1.02522528478712,1.23832120777933,1.48155621895769,1.31857919903284,1.23024804948923,0.915112692826091,0.169978429993855,0.279902904647316,0.414599921413271,2.86401185404534,1.58167996790568,2.84647253977588,2.59212817972323,2.71814784818809,2.62035076495413,2.29269388854195,2.56225712748541,1.83229159388821,0.259229946583586,0.621339313086926,0,0.747582730219894,0.165458490457098,1.16670713006429,0.774958940866387,1.3516490039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| |||
|short_description=p5@Rbms1 | |||
}} | |||
Revision as of 00:14, 14 September 2013
| Short description: | p5@Rbms1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Rbms1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3358 |
| Association with transcript: | 83bp_to_ENSMUST00000164147, NM_001141931, NM_001141932, uc008jur.2, uc008jus.2, uc008juv.1_5end |
| EntrezGene: | Rbms1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| thoracic cavity element | 9.42e-07 | 17 |
| thoracic segment organ | 9.42e-07 | 17 |
| thoracic cavity | 9.42e-07 | 17 |
| thoracic segment of trunk | 9.42e-07 | 17 |
| respiratory primordium | 9.42e-07 | 17 |
| endoderm of foregut | 9.42e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
