FFCP PHASE1:Mm9::chr2:79475573..79475598,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70599|HGNC=|MCL_coexpression_id=1781|UniProt=Q3TEM8,A2AQD6,Q922B9|association_with_transcript=0bp_to_ENSMUST00000028393,ENSMUST00000111788,NM_080558,uc008kgv.2,uc008kgw.2_5end|description=CAGE_peak_3_at_Ssfa2_5end|id=chr2:79475573..79475598,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.21e-14!43;UBERON:0005409!4.18e-13!59;UBERON:0002108!2.35e-08!16;UBERON:0001045!7.42e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.89e-09,31;UBERON:0005409,2.22e-08,47|phase1_expression=2.08193501236232,23.3813523118372,24.5699589270349,17.2404600444893,21.5385163876929,11.7515490338323,8.41005506143892,1.03298658753261,3.37892933164,7.0219357896598,0.856089841127525,0.957265907944037,1.19840510951844,0.786783621770977,0.333109761815663,0.809901069559304,0,0.788655413395594,1.09691546884591,4.2438965179803,3.82694805679814,0.397163804803541,0,3.67982572424835,6.65286915094793,18.9496548157957,11.1998119001359,13.1437451938392,10.6413114895569,8.56902441183765,8.20402889424627,0,0.61506478758457,0,0.288851619751275,1.49611180822643,1.02084678131185,1.25559489221072,0,1.0470474879476,1.17646297606203,3.41522742479223,1.94204141212461,1.25896817975577,0.608261587317087,0.734187008646726,1.56478268869608,5.01457859675027,6.15121311656521,6.80504646759992,4.33957907038624,4.31257693094915,1.8456086666351,1.45072428402269,2.01656279485478,2.31533492432352,8.5960031981627,4.64104883049698,0.202316460859598,0,0,3.72728985276045,3.55717918444456,2.2497492932035,2.96659908770092,1.4209602298922,0.599200221036809,0.768436610643109,0.622137673850866,0.540023753326763,1.47227472945967,1.42825492201902,3.3130281142742,0.489963196859816,0.0958454710182364,0,5.50579404996943,4.08599481872601,3.22573719838111,0.659431438650969,0.548925861614458,1.04182674111352,3.62937898701795,4.50210088025344,2.29197371665215,1.17851434189467,2.70506193518296,0.559198337475902,3.7863096666592,10.202160614416,11.3047150593654,9.46466264679525,8.15965600449301,7.55584468292944,7.14754059192436,8.06448396775204,5.47733238513832,0.340860645156116,0.259786004602869,0.70667914902068,4.3661460130771,6.41632387071589,2.54805239706646,7.11066703153331,2.59789249213457,1.77351905832569,2.02209778005913,9.7056297761201,2.07150306917737,3.41416919849097,1.38788261412909,1.82679286987285,2.07553947530453,1.95939432718409,2.4693628498498,2.89033160058254,3.21353458054686,9.54355755671417,0.884610551949874,1.7794353494215,2.20841518460394,1.45462575940567,7.45567044872489,2.92780797011547,2.93225389538837,9.96282515313506,0.239630249011841,0.599902730993408,0.635351135365324,5.09288173976397,2.74500361691176,0.502617408451458,2.43354048269187,2.55715457330331,3.94797284663164,3.40706652442291,3.1570202793598,3.11017426525233,2.52722758433675,20.6233018768745,0.780722657776222,0.919608417733892,1.44049703844279,1.50704817835715,2.24520447199382,2.43416068541215,1.59292931751539,7.76110112217047,0.431135985865684,1.70195472151037,0.703804496655795,1.53437012699302,2.78047249225598,5.57203466435466,7.20237477427802,2.18937693500343,0.702213187313235,1.28673953557358,0.284163499395593,1.86413195281952,1.40715635988658,1.62055855314913,3.07768156260773,3.34499193970586,1.23413690309903,1.86027155800326,1.3413670069981,2.56883753207773,1.97471819896177,2.95501435342371,5.91802309684747,3.21639972335731,2.63460138349261,3.75777972529041,3.36463917702604,1.54356918568927,17.1817767151575,5.55346189993443,4.90562976231038,3.94802342162745,2.83508414908605,3.63030344322017,3.55804870151792,3.42406127002606,10.9141684155238,7.24675400785648,7.28872105520782,10.544693018181,8.96834800747953,8.08937467788799,5.61958929674205,10.3553462092271,1.89667900953082,2.39921876480431,3.38123207019241,3.46207257337034,2.13347735884388,7.43439690837377,6.57659986092276,8.70899873079653,6.75094529717912,6.78684401569903,11.2651998293117,0.500535317148282,0.982794975566015,0.224862112384854,0.811440485554012,1.68824011826692,0.763877555344259,2.5892652370573,2.10775794807546,2.19649130550465,1.43768206527355,3.34926852901653,4.99260276983297,3.53610429125956,4.66433275156972,7.71909634181387,1.66277871149944,2.08440552947533,0.977789858652155,0.678980343100753,1.40814148973101,1.67506257441816,2.61848004974615,1.75620283072019,3.31033802623001,1.99318220683897,3.34855014180723,2.78567635016755,2.59027472798843,3.03763023021174,9.04747703635634,9.24639662491806,0.491764273019036,2.48343071674259,5.45872005958493,5.86058432961016,0.163934945376675,2.7771801992481,5.04813151066011,4.29482618726302,2.36965737506079,3.34556317133573,2.00518806674155,3.96307143104365,4.04810701674894,2.04579100537918,2.37172666767914,5.46246237917072,1.98716119291576,2.13678724400706,2.28041743095006,4.78413356620353,42.4784442687881,2.6705869977048,3.32555912661226,9.24164890803901,7.38254732201932,11.9899707698132,9.8202751403924,10.9060118843252,12.1209108650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| ||
|EntrezGene=70599 | |||
|HGNC= | |||
|MCL_coexpression_id=1781 | |||
|UniProt=Q3TEM8,A2AQD6,Q922B9 | |||
|association_with_transcript=0bp_to_ENSMUST00000028393,ENSMUST00000111788,NM_080558,uc008kgv.2,uc008kgw.2_5end | |||
|description=CAGE_peak_3_at_Ssfa2_5end | |||
|id=chr2:79475573..79475598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.21e-14!43;UBERON:0005409!4.18e-13!59;UBERON:0002108!2.35e-08!16;UBERON:0001045!7.42e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.89e-09,31;UBERON:0005409,2.22e-08,47 | |||
|phase1_expression=2.08193501236232,23.3813523118372,24.5699589270349,17.2404600444893,21.5385163876929,11.7515490338323,8.41005506143892,1.03298658753261,3.37892933164,7.0219357896598,0.856089841127525,0.957265907944037,1.19840510951844,0.786783621770977,0.333109761815663,0.809901069559304,0,0.788655413395594,1.09691546884591,4.2438965179803,3.82694805679814,0.397163804803541,0,3.67982572424835,6.65286915094793,18.9496548157957,11.1998119001359,13.1437451938392,10.6413114895569,8.56902441183765,8.20402889424627,0,0.61506478758457,0,0.288851619751275,1.49611180822643,1.02084678131185,1.25559489221072,0,1.0470474879476,1.17646297606203,3.41522742479223,1.94204141212461,1.25896817975577,0.608261587317087,0.734187008646726,1.56478268869608,5.01457859675027,6.15121311656521,6.80504646759992,4.33957907038624,4.31257693094915,1.8456086666351,1.45072428402269,2.01656279485478,2.31533492432352,8.5960031981627,4.64104883049698,0.202316460859598,0,0,3.72728985276045,3.55717918444456,2.2497492932035,2.96659908770092,1.4209602298922,0.599200221036809,0.768436610643109,0.622137673850866,0.540023753326763,1.47227472945967,1.42825492201902,3.3130281142742,0.489963196859816,0.0958454710182364,0,5.50579404996943,4.08599481872601,3.22573719838111,0.659431438650969,0.548925861614458,1.04182674111352,3.62937898701795,4.50210088025344,2.29197371665215,1.17851434189467,2.70506193518296,0.559198337475902,3.7863096666592,10.202160614416,11.3047150593654,9.46466264679525,8.15965600449301,7.55584468292944,7.14754059192436,8.06448396775204,5.47733238513832,0.340860645156116,0.259786004602869,0.70667914902068,4.3661460130771,6.41632387071589,2.54805239706646,7.11066703153331,2.59789249213457,1.77351905832569,2.02209778005913,9.7056297761201,2.07150306917737,3.41416919849097,1.38788261412909,1.82679286987285,2.07553947530453,1.95939432718409,2.4693628498498,2.89033160058254,3.21353458054686,9.54355755671417,0.884610551949874,1.7794353494215,2.20841518460394,1.45462575940567,7.45567044872489,2.92780797011547,2.93225389538837,9.96282515313506,0.239630249011841,0.599902730993408,0.635351135365324,5.09288173976397,2.74500361691176,0.502617408451458,2.43354048269187,2.55715457330331,3.94797284663164,3.40706652442291,3.1570202793598,3.11017426525233,2.52722758433675,20.6233018768745,0.780722657776222,0.919608417733892,1.44049703844279,1.50704817835715,2.24520447199382,2.43416068541215,1.59292931751539,7.76110112217047,0.431135985865684,1.70195472151037,0.703804496655795,1.53437012699302,2.78047249225598,5.57203466435466,7.20237477427802,2.18937693500343,0.702213187313235,1.28673953557358,0.284163499395593,1.86413195281952,1.40715635988658,1.62055855314913,3.07768156260773,3.34499193970586,1.23413690309903,1.86027155800326,1.3413670069981,2.56883753207773,1.97471819896177,2.95501435342371,5.91802309684747,3.21639972335731,2.63460138349261,3.75777972529041,3.36463917702604,1.54356918568927,17.1817767151575,5.55346189993443,4.90562976231038,3.94802342162745,2.83508414908605,3.63030344322017,3.55804870151792,3.42406127002606,10.9141684155238,7.24675400785648,7.28872105520782,10.544693018181,8.96834800747953,8.08937467788799,5.61958929674205,10.3553462092271,1.89667900953082,2.39921876480431,3.38123207019241,3.46207257337034,2.13347735884388,7.43439690837377,6.57659986092276,8.70899873079653,6.75094529717912,6.78684401569903,11.2651998293117,0.500535317148282,0.982794975566015,0.224862112384854,0.811440485554012,1.68824011826692,0.763877555344259,2.5892652370573,2.10775794807546,2.19649130550465,1.43768206527355,3.34926852901653,4.99260276983297,3.53610429125956,4.66433275156972,7.71909634181387,1.66277871149944,2.08440552947533,0.977789858652155,0.678980343100753,1.40814148973101,1.67506257441816,2.61848004974615,1.75620283072019,3.31033802623001,1.99318220683897,3.34855014180723,2.78567635016755,2.59027472798843,3.03763023021174,9.04747703635634,9.24639662491806,0.491764273019036,2.48343071674259,5.45872005958493,5.86058432961016,0.163934945376675,2.7771801992481,5.04813151066011,4.29482618726302,2.36965737506079,3.34556317133573,2.00518806674155,3.96307143104365,4.04810701674894,2.04579100537918,2.37172666767914,5.46246237917072,1.98716119291576,2.13678724400706,2.28041743095006,4.78413356620353,42.4784442687881,2.6705869977048,3.32555912661226,9.24164890803901,7.38254732201932,11.9899707698132,9.8202751403924,10.9060118843252,12.1209108650805,15.8018378967908,41.1132573442495,30.9406629744561,1.02131881726136,1.98067203434441,1.29358683782755,1.71469628025274,1.24138163549592,1.96205699362278,2.46823530903181,3.34911444026059,4.92810586933792,3.81297727554876,1.54369878638473,25.5573692059294,12.4327608555847,10.9166394119962,9.54978752025092,8.20704498725306,10.4933101186746,8.52956389248344,1.19609616558497,1.65109494370578,2.22233432843654,1.13021074202815,0.410082683163076,1.37266903923914,0.679913719975421,0.69975726161829,0.967399816630967,5.72802370809068,1.42351197111511,3.25311147402958,3.99619761040665,4.18176592028937,6.55087691238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| |||
|short_description=p3@Ssfa2 | |||
}} | |||
Revision as of 00:43, 14 September 2013
| Short description: | p3@Ssfa2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Ssfa2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1781 |
| Association with transcript: | 0bp_to_ENSMUST00000028393, ENSMUST00000111788, NM_080558, uc008kgv.2, uc008kgw.2_5end |
| EntrezGene: | Ssfa2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 2.89e-09 | 31 |
| gastrointestinal system | 2.22e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
