FFCP PHASE1:Mm9::chr2:79475601..79475620,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=70599|HGNC=|MCL_coexpression_id=1781|UniProt=A2AQD5|association_with_transcript=0bp_to_ENSMUST00000111784,ENSMUST00000124938_5end|description=CAGE_peak_5_at_Ssfa2_5end|id=chr2:79475601..79475620,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.26e-12!59;UBERON:0000160!3.76e-12!43;UBERON:0002108!4.32e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.71e-09,47;UBERON:0000160,1.50e-08,31|phase1_expression=1.12104192973356,5.58360652222978,4.54999239389536,4.53696316960245,5.50985302940982,3.69334398206158,1.40167584357315,0.387369970324729,1.97104211012333,3.5109678948299,0.34243593645101,0.239316476986009,0.342401459862411,0.174840804837995,0.333109761815663,0,0.699561878128147,0.315462165358238,0.137114433605739,0,1.10556277196391,0.0992909512008853,0.522399578277871,1.11994695955385,1.60586496747019,6.89078356938024,4.30761996159075,3.44753972297422,3.42042155021473,3.02436155711917,1.77384408524244,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,1.17646297606203,1.36609096991689,0.971020706062307,0.251793635951155,0.202753862439029,0,3.12956537739216,6.32272953503295,4.17403747195497,7.58276606389705,3.77963338388479,1.43752564364972,0.335565212115473,0.725362142011344,1.00828139742739,1.28629718017973,5.73066879877513,4.12537673821954,0,0,0,4.06613438482959,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,1.79760066311043,0.768436610643109,0.829516898467821,0.810035629990144,1.05162480675691,2.57085885963423,1.32521124570968,0.122490799214954,0.479227355091182,0.919218786610021,4.40463523997555,2.55374676170375,2.4577045320999,0.263772575460388,0.457438218012048,0.52091337055676,2.23346399201105,1.68828783009504,1.98637722109853,1.47314292736834,3.55929201997757,0.372798891650601,1.59025005999687,5.2144376473682,2.02905142091174,1.72084775396277,3.39985666853875,0,0.649776417447669,0.448026887097336,1.12355536105401,0,0,0.35333957451034,0.985903938436763,2.56652954828636,7.64415719119937,21.3320010945999,0.865964164044856,1.26679932737549,1.51657333504435,2.62622923353838,0.517875767294343,1.03909497345377,1.38788261412909,0.304465478312141,0.691846491768175,1.65794904607885,1.52865319276416,0.753999547978053,2.22475470960936,6.07317299063629,0.884610551949874,0.808834249737046,0.220841518460394,0,5.59175283654366,0.585561594023094,0.209446706813455,4.34276993854605,0,1.19980546198682,0.381210681219194,2.24685959107234,1.83000241127451,0.502617408451458,1.21677024134594,2.30143911597297,1.66230435647648,1.78465389374533,3.86989582631202,1.11966273549084,0,5.6819301089348,1.17108398666433,0.229902104433473,0.720248519221397,1.35634336052144,1.76894897793452,1.2811372028485,0.655912071918102,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.657587197282725,0.556094498451196,1.74126083261083,5.76189981942242,1.59227413454795,0,0,0.568326998791185,0.414251545071004,0.703578179943289,1.62055855314913,0.710234206755631,0.590292695242212,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,0.987359099480883,2.13417703302824,1.37816976227955,0.730999937126662,0.439100230582101,1.47627060636409,1.47202963994889,1.23485534855141,7.93005079161115,1.85115396664481,4.26576501070468,2.78684006232526,2.83508414908605,3.83198696784351,2.00140239460383,2.28270751335071,5.21981967698963,2.63518327558417,3.2673577144035,2.58643413653496,4.67913809085888,1.79763881730844,3.24207074812041,3.78368419183298,1.13800740571849,2.28497025219458,4.50830942692322,1.83286195060783,1.93952487167626,3.43665517462561,3.66771915320692,3.83786384746966,2.19798218977925,3.20832626196681,1.48226313543574,0.166845105716094,0.196558995113203,0.674586337154561,0,0,1.52775511068852,0.575392274901621,0.486405680325106,0.274561413188081,0,0.744281895337007,0.312037673114561,0.505157755894224,0.717589654087649,0.964887042726734,0.184753190166605,1.32643988239339,0.651859905768103,0.509235257325564,0.469380496577004,0.335012514883631,1.19021820443007,0.975668239288994,0.630540576424764,0.8858587585951,0.318909537314974,0.81931657357869,0.863424909329478,0.578596234326046,3.01582567878545,3.80733978673097,0.983528546038072,0.275936746304732,3.85321415970701,2.81308047821288,0.327869890753351,0.504941854408746,1.57754109708128,5.46614242015294,1.07711698866399,2.15071918157297,2.00518806674155,1.69845918473299,2.83367491172426,2.63030272120181,1.97643888973262,2.57057053137446,0.99358059645788,2.13678724400706,1.46598263418218,2.3095817216155,22.5666735177937,1.21390318077491,1.209294227859,4.33791683438566,5.31543407185391,6.7635732547664,5.68542244970086,3.63533729477506,5.34746067577082,5.37262488490887,11.5960469432499,21.6584640821192,0.340439605753788,1.26042765821917,0.776152102696527,1.71469628025274,0.709360934569094,0.535106452806212,0.822745103010605,1.8267896946876,1.64270195644597,1.69465656691056,1.10264199027481,12.696241476494,7.26589920131575,8.14224486530104,7.63983001620073,4.26766339337159,4.08073171281791,3.70850604021019,0.341741761595705,1.23832120777933,1.48155621895769,0.376736914009382,0.136694227721025,0.228778173206523,1.18984900995699,1.11961161858926,0.552799895217695,4.77335309007557,1.89801596148681,3.04979200690273,1.83609079397062,3.13632444021703,4.80397640241591,4.18079473792944,4.29797969771747,4.4498510137285,5.05498395837992,0,0,2.39226473670366,2.31641886639937,1.55560950675238,1.42075805825504,1.520605129417,1.64300134104056,0.911430693907651,0.419437377702843,0.966336483304024,0.576060012515731,0.316011120628178,0.810900861160657,0.102710957164827,0.389762468933385,0.716106782669926,0,0.240390899039938,0.590758108698309,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.233753804363138,7.70883304291719,0.221985953374065,0.179427713218951,0.503653849092235,5.9888774149979,2.25218970541418,0,2.78678892802786,1.00314420807073,1.6942555278512,1.38097570952153,0.572895513439397,0.859265911718438,0.685082519770642,1.5107877947794,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0,0,1.36586884603307,0.972426868273176,0.419226325255965,0.919217542250071,1.55572709461131,1.03017528619447,1.60459604795908,1.01078884705519,1.2673964994512,0.943131706930381,1.87283014939765,1.79270426733634,1.43588672389033,0.952587382566147,1.85414921511769,1.73618298417335,1.23625770240992,1.91358596174717,3.08582327146874,2.8396128985494,2.62279808942053,1.74415699958794,1.03520318456864,1.86152137361688,1.64635175585495,1.8414879800649,1.7654534799962,1.68342681497322,2.01679530811096,1.28055827088233,0.818462086339379,2.16911577660352,1.92906610981141,1.74867404556562,3.27504251823572,3.00819475667618,1.14772999241306,1.54413993383661,0.231867835620421|short_description=p5@Ssfa2}} | ||
|EntrezGene=70599 | |||
|HGNC= | |||
|MCL_coexpression_id=1781 | |||
|UniProt=A2AQD5 | |||
|association_with_transcript=0bp_to_ENSMUST00000111784,ENSMUST00000124938_5end | |||
|description=CAGE_peak_5_at_Ssfa2_5end | |||
|id=chr2:79475601..79475620,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.26e-12!59;UBERON:0000160!3.76e-12!43;UBERON:0002108!4.32e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.71e-09,47;UBERON:0000160,1.50e-08,31 | |||
|phase1_expression=1.12104192973356,5.58360652222978,4.54999239389536,4.53696316960245,5.50985302940982,3.69334398206158,1.40167584357315,0.387369970324729,1.97104211012333,3.5109678948299,0.34243593645101,0.239316476986009,0.342401459862411,0.174840804837995,0.333109761815663,0,0.699561878128147,0.315462165358238,0.137114433605739,0,1.10556277196391,0.0992909512008853,0.522399578277871,1.11994695955385,1.60586496747019,6.89078356938024,4.30761996159075,3.44753972297422,3.42042155021473,3.02436155711917,1.77384408524244,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,0,1.17646297606203,1.36609096991689,0.971020706062307,0.251793635951155,0.202753862439029,0,3.12956537739216,6.32272953503295,4.17403747195497,7.58276606389705,3.77963338388479,1.43752564364972,0.335565212115473,0.725362142011344,1.00828139742739,1.28629718017973,5.73066879877513,4.12537673821954,0,0,0,4.06613438482959,2.66788438833342,0.449949858640699,0.988866362566974,1.4209602298922,1.79760066311043,0.768436610643109,0.829516898467821,0.810035629990144,1.05162480675691,2.57085885963423,1.32521124570968,0.122490799214954,0.479227355091182,0.919218786610021,4.40463523997555,2.55374676170375,2.4577045320999,0.263772575460388,0.457438218012048,0.52091337055676,2.23346399201105,1.68828783009504,1.98637722109853,1.47314292736834,3.55929201997757,0.372798891650601,1.59025005999687,5.2144376473682,2.02905142091174,1.72084775396277,3.39985666853875,0,0.649776417447669,0.448026887097336,1.12355536105401,0,0,0.35333957451034,0.985903938436763,2.56652954828636,7.64415719119937,21.3320010945999,0.865964164044856,1.26679932737549,1.51657333504435,2.62622923353838,0.517875767294343,1.03909497345377,1.38788261412909,0.304465478312141,0.691846491768175,1.65794904607885,1.52865319276416,0.753999547978053,2.22475470960936,6.07317299063629,0.884610551949874,0.808834249737046,0.220841518460394,0,5.59175283654366,0.585561594023094,0.209446706813455,4.34276993854605,0,1.19980546198682,0.381210681219194,2.24685959107234,1.83000241127451,0.502617408451458,1.21677024134594,2.30143911597297,1.66230435647648,1.78465389374533,3.86989582631202,1.11966273549084,0,5.6819301089348,1.17108398666433,0.229902104433473,0.720248519221397,1.35634336052144,1.76894897793452,1.2811372028485,0.655912071918102,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.657587197282725,0.556094498451196,1.74126083261083,5.76189981942242,1.59227413454795,0,0,0.568326998791185,0.414251545071004,0.703578179943289,1.62055855314913,0.710234206755631,0.590292695242212,1.23413690309903,0.232533944750408,0.536546802799238,0.700592054203017,0.987359099480883,2.13417703302824,1.37816976227955,0.730999937126662,0.439100230582101,1.47627060636409,1.47202963994889,1.23485534855141,7.93005079161115,1.85115396664481,4.26576501070468,2.78684006232526,2.83508414908605,3.83198696784351,2.00140239460383,2.28270751335071,5.21981967698963,2.63518327558417,3.2673577144035,2.58643413653496,4.67913809085888,1.79763881730844,3.24207074812041,3.78368419183298,1.13800740571849,2.28497025219458,4.50830942692322,1.83286195060783,1.93952487167626,3.43665517462561,3.66771915320692,3.83786384746966,2.19798218977925,3.20832626196681,1.48226313543574,0.166845105716094,0.196558995113203,0.674586337154561,0,0,1.52775511068852,0.575392274901621,0.486405680325106,0.274561413188081,0,0.744281895337007,0.312037673114561,0.505157755894224,0.717589654087649,0.964887042726734,0.184753190166605,1.32643988239339,0.651859905768103,0.509235257325564,0.469380496577004,0.335012514883631,1.19021820443007,0.975668239288994,0.630540576424764,0.8858587585951,0.318909537314974,0.81931657357869,0.863424909329478,0.578596234326046,3.01582567878545,3.80733978673097,0.983528546038072,0.275936746304732,3.85321415970701,2.81308047821288,0.327869890753351,0.504941854408746,1.57754109708128,5.46614242015294,1.07711698866399,2.15071918157297,2.00518806674155,1.69845918473299,2.83367491172426,2.63030272120181,1.97643888973262,2.57057053137446,0.99358059645788,2.13678724400706,1.46598263418218,2.3095817216155,22.5666735177937,1.21390318077491,1.209294227859,4.33791683438566,5.31543407185391,6.7635732547664,5.68542244970086,3.63533729477506,5.34746067577082,5.37262488490887,11.5960469432499,21.6584640821192,0.340439605753788,1.26042765821917,0.776152102696527,1.71469628025274,0.709360934569094,0.535106452806212,0.822745103010605,1.8267896946876,1.64270195644597,1.69465656691056,1.10264199027481,12.696241476494,7.26589920131575,8.14224486530104,7.63983001620073,4.26766339337159,4.08073171281791,3.70850604021019,0.341741761595705,1.23832120777933,1.48155621895769,0.376736914009382,0.136694227721025,0.228778173206523,1.18984900995699,1.11961161858926,0.552799895217695,4.77335309007557,1.89801596148681,3.04979200690273,1.83609079397062,3.13632444021703,4.80397640241591,4.18079473792944,4.29797969771747,4.4498510137285,5.05498395837992,0,0,2.39226473670366,2.31641886639937,1.55560950675238,1.42075805825504,1.520605129417,1.64300134104056,0.911430693907651,0.419437377702843,0.966336483304024,0.576060012515731,0.316011120628178,0.810900861160657,0.102710957164827,0.389762468933385,0.716106782669926,0,0.240390899039938,0.590758108698309,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.233753804363138,7.70883304291719,0.221985953374065,0.179427713218951,0.503653849092235,5.9888774149979,2.25218970541418,0,2.78678892802786,1.00314420807073,1.6942555278512,1.38097570952153,0.572895513439397,0.859265911718438,0.685082519770642,1.5107877947794,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0,0,1.36586884603307,0.972426868273176,0.419226325255965,0.919217542250071,1.55572709461131,1.03017528619447,1.60459604795908,1.01078884705519,1.2673964994512,0.943131706930381,1.87283014939765,1.79270426733634,1.43588672389033,0.952587382566147,1.85414921511769,1.73618298417335,1.23625770240992,1.91358596174717,3.08582327146874,2.8396128985494,2.62279808942053,1.74415699958794,1.03520318456864,1.86152137361688,1.64635175585495,1.8414879800649,1.7654534799962,1.68342681497322,2.01679530811096,1.28055827088233,0.818462086339379,2.16911577660352,1.92906610981141,1.74867404556562,3.27504251823572,3.00819475667618,1.14772999241306,1.54413993383661,0.231867835620421 | |||
|short_description=p5@Ssfa2 | |||
}} | |||
Revision as of 00:43, 14 September 2013
| Short description: | p5@Ssfa2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Ssfa2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1781 |
| Association with transcript: | 0bp_to_ENSMUST00000111784, ENSMUST00000124938_5end |
| EntrezGene: | Ssfa2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 1.71e-09 | 47 |
| intestine | 1.50e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
