FFCP PHASE1:Hg19::chr7:29519331..29519340,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1124|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1944|TSSclassifier=S|UniProt=|association_with_transcript=3bp_to_ENST00000412711_5end|coexpression_cluster_id=C24|description=CAGE_peak_17_at_CHN2_5end|id=chr7:29519331..29519340,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;2.71e-19;1!UBERON:0003056;3.06e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.47e-35!57;UBERON:0005068!1.47e-35!57;UBERON:0006241!1.47e-35!57;UBERON:0007135!1.47e-35!57;UBERON:0002616!3.43e-34!59;UBERON:0000955!7.42e-34!69;UBERON:0006238!7.42e-34!69;UBERON:0003075!1.67e-31!86;UBERON:0007284!1.67e-31!86;UBERON:0005743!2.97e-31!86;UBERON:0002780!6.04e-31!41;UBERON:0001890!6.04e-31!41;UBERON:0006240!6.04e-31!41;UBERON:0001017!2.68e-30!82;UBERON:0003080!3.98e-30!42;UBERON:0002346!7.69e-30!90;UBERON:0007023!2.17e-28!115;UBERON:0000073!9.13e-28!94;UBERON:0001016!9.13e-28!94;UBERON:0003056!2.03e-27!61;UBERON:0001893!3.58e-22!34;UBERON:0002020!3.65e-22!34;UBERON:0003528!3.65e-22!34;UBERON:0000033!8.13e-22!123;UBERON:0002619!1.09e-21!22;UBERON:0000153!1.61e-20!129;UBERON:0007811!1.61e-20!129;UBERON:0001869!3.02e-20!32;UBERON:0002791!1.07e-19!33;UBERON:0000956!6.28e-19!25;UBERON:0000203!6.28e-19!25;UBERON:0001950!6.21e-16!20;UBERON:0004121!3.84e-14!169;UBERON:0000924!1.12e-13!173;UBERON:0006601!1.12e-13!173;UBERON:0002298!1.51e-13!8;UBERON:0001894!4.79e-11!7;UBERON:0006222!4.79e-11!7;UBERON:0001905!6.22e-11!2;UBERON:0002757!6.22e-11!2;UBERON:0010134!6.22e-11!2;UBERON:0002784!6.22e-11!2;UBERON:0005408!6.22e-11!2;UBERON:0001899!6.22e-11!2;UBERON:0001954!3.36e-10!2;UBERON:0003022!3.36e-10!2;UBERON:0002421!3.36e-10!2;UBERON:0002600!3.36e-10!2;UBERON:0001872!8.10e-09!5;UBERON:0004733!9.24e-09!12;UBERON:0002028!9.24e-09!12;UBERON:0007277!9.24e-09!12;UBERON:0000349!1.14e-08!5;UBERON:0000025!1.27e-08!194;UBERON:0004732!4.56e-08!13;UBERON:0000064!8.56e-08!219;UBERON:0000200!4.19e-07!6;UBERON:0006331!5.82e-07!3;UBERON:0003076!5.86e-07!15;UBERON:0003057!5.86e-07!15;UBERON:0000481!8.03e-07!347;UBERON:0001896!9.92e-07!3;UBERON:0005290!9.92e-07!3;UBERON:0010096!9.92e-07!3|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0002108;2.17e-15;4!UBERON:0001894;1.68e-11;7!UBERON:0001954;3.13e-10;2!UBERON:0003022;3.13e-10;2!UBERON:0002421;3.13e-10;2!UBERON:0002600;3.13e-10;2!UBERON:0000160;1.14e-09;17!UBERON:0005409;1.08e-07;22!UBERON:0002114;3.06e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0002108,2.34e-15,4;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0001954,2.72e-10,2;UBERON:0003022,2.72e-10,2;UBERON:0002421,2.72e-10,2;UBERON:0002600,2.72e-10,2;UBERON:0000160,1.17e-09,17;UBERON:0002114,3.35e-07,2;UBERON:0005409,7.41e-07,25|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57282656371037,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,3.18201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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENST00000412711_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_17_at_CHN2_5end | |||
|id=chr7:29519331..29519340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.71e-19;1!UBERON:0003056;3.06e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.47e-35!57;UBERON:0005068!1.47e-35!57;UBERON:0006241!1.47e-35!57;UBERON:0007135!1.47e-35!57;UBERON:0002616!3.43e-34!59;UBERON:0000955!7.42e-34!69;UBERON:0006238!7.42e-34!69;UBERON:0003075!1.67e-31!86;UBERON:0007284!1.67e-31!86;UBERON:0005743!2.97e-31!86;UBERON:0002780!6.04e-31!41;UBERON:0001890!6.04e-31!41;UBERON:0006240!6.04e-31!41;UBERON:0001017!2.68e-30!82;UBERON:0003080!3.98e-30!42;UBERON:0002346!7.69e-30!90;UBERON:0007023!2.17e-28!115;UBERON:0000073!9.13e-28!94;UBERON:0001016!9.13e-28!94;UBERON:0003056!2.03e-27!61;UBERON:0001893!3.58e-22!34;UBERON:0002020!3.65e-22!34;UBERON:0003528!3.65e-22!34;UBERON:0000033!8.13e-22!123;UBERON:0002619!1.09e-21!22;UBERON:0000153!1.61e-20!129;UBERON:0007811!1.61e-20!129;UBERON:0001869!3.02e-20!32;UBERON:0002791!1.07e-19!33;UBERON:0000956!6.28e-19!25;UBERON:0000203!6.28e-19!25;UBERON:0001950!6.21e-16!20;UBERON:0004121!3.84e-14!169;UBERON:0000924!1.12e-13!173;UBERON:0006601!1.12e-13!173;UBERON:0002298!1.51e-13!8;UBERON:0001894!4.79e-11!7;UBERON:0006222!4.79e-11!7;UBERON:0001905!6.22e-11!2;UBERON:0002757!6.22e-11!2;UBERON:0010134!6.22e-11!2;UBERON:0002784!6.22e-11!2;UBERON:0005408!6.22e-11!2;UBERON:0001899!6.22e-11!2;UBERON:0001954!3.36e-10!2;UBERON:0003022!3.36e-10!2;UBERON:0002421!3.36e-10!2;UBERON:0002600!3.36e-10!2;UBERON:0001872!8.10e-09!5;UBERON:0004733!9.24e-09!12;UBERON:0002028!9.24e-09!12;UBERON:0007277!9.24e-09!12;UBERON:0000349!1.14e-08!5;UBERON:0000025!1.27e-08!194;UBERON:0004732!4.56e-08!13;UBERON:0000064!8.56e-08!219;UBERON:0000200!4.19e-07!6;UBERON:0006331!5.82e-07!3;UBERON:0003076!5.86e-07!15;UBERON:0003057!5.86e-07!15;UBERON:0000481!8.03e-07!347;UBERON:0001896!9.92e-07!3;UBERON:0005290!9.92e-07!3;UBERON:0010096!9.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.30e-37;2!UBERON:0002757;1.30e-37;2!UBERON:0010134;1.30e-37;2!UBERON:0005408;1.30e-37;2!UBERON:0001899;1.30e-37;2!UBERON:0003296;2.26e-19;4!UBERON:0010133;2.26e-19;4!UBERON:0002784;2.26e-19;4!UBERON:0002108;2.17e-15;4!UBERON:0001894;1.68e-11;7!UBERON:0001954;3.13e-10;2!UBERON:0003022;3.13e-10;2!UBERON:0002421;3.13e-10;2!UBERON:0002600;3.13e-10;2!UBERON:0000160;1.14e-09;17!UBERON:0005409;1.08e-07;22!UBERON:0002114;3.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.30e-37,2;UBERON:0002757,1.30e-37,2;UBERON:0010134,1.30e-37,2;UBERON:0005408,1.30e-37,2;UBERON:0001899,1.30e-37,2;UBERON:0003296,2.26e-19,4;UBERON:0010133,2.26e-19,4;UBERON:0002784,2.26e-19,4;UBERON:0002108,2.34e-15,4;UBERON:0001894,1.68e-11,7;UBERON:0006222,1.68e-11,7;UBERON:0001954,2.72e-10,2;UBERON:0003022,2.72e-10,2;UBERON:0002421,2.72e-10,2;UBERON:0002600,2.72e-10,2;UBERON:0000160,1.17e-09,17;UBERON:0002114,3.35e-07,2;UBERON:0005409,7.41e-07,25 | |||
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|short_description=p17@CHN2 | |||
}} |
Revision as of 00:50, 14 September 2013
Short description: | p17@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_CHN2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 3bp_to_ENST00000412711_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
gland of diencephalon | 2.26e-19 | 4 |
neuroendocrine gland | 2.26e-19 | 4 |
regional part of diencephalon | 2.26e-19 | 4 |
small intestine | 2.34e-15 | 4 |
diencephalon | 1.68e-11 | 7 |
future diencephalon | 1.68e-11 | 7 |
Ammon's horn | 2.72e-10 | 2 |
lobe parts of cerebral cortex | 2.72e-10 | 2 |
hippocampal formation | 2.72e-10 | 2 |
limbic lobe | 2.72e-10 | 2 |
intestine | 1.17e-09 | 17 |
duodenum | 3.35e-07 | 2 |
gastrointestinal system | 7.41e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.