FFCP PHASE1:Mm9::chr3:136565991..136566033,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19055|HGNC=|MCL_coexpression_id=0|UniProt=Q8C649|association_with_transcript=0bp_to_uc008rmi.1_5end|description=CAGE_peak_5_at_Ppp3ca_5end|id=chr3:136565991..136566033,+|ontology_enrichment_celltype=CL:0002614!1.18e-08!3|ontology_enrichment_celltype_v019_2=CL:0002614,4.24e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!8.33e-23!17;UBERON:0009196!8.33e-23!17;UBERON:0009117!8.33e-23!17;UBERON:0003135!1.87e-22!15;UBERON:0000991!2.23e-21!18;UBERON:0005564!2.23e-21!18;UBERON:0003101!6.90e-21!16;UBERON:0000079!6.90e-21!16;UBERON:0000473!1.87e-20!14;UBERON:0003133!8.22e-18!24;UBERON:0005156!3.36e-16!26;UBERON:0000990!3.36e-16!26;UBERON:0002298!7.70e-16!6;UBERON:0002950!3.91e-11!4;UBERON:0001891!3.91e-11!4;UBERON:0009616!3.91e-11!4;UBERON:0003886!4.11e-10!38;UBERON:0002553!8.92e-10!39;UBERON:0002323!5.97e-09!37;UBERON:0004458!5.97e-09!37;UBERON:0002038!1.18e-08!3;UBERON:0002308!1.18e-08!3;UBERON:0009663!1.18e-08!3;UBERON:0009661!1.18e-08!3;UBERON:0006331!1.18e-08!3;UBERON:0000125!1.18e-08!3;UBERON:0001301!7.83e-08!3;UBERON:0006555!7.83e-08!3;UBERON:0005103!7.83e-08!3;UBERON:0000083!7.83e-08!3;UBERON:0009201!7.83e-08!3;UBERON:0004819!7.83e-08!3;UBERON:0006553!7.83e-08!3;UBERON:0003074!7.83e-08!3;UBERON:0003060!7.83e-08!3;UBERON:0000464!9.82e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.68e-14,4;UBERON:0001891,1.68e-14,4;UBERON:0009616,1.68e-14,4;UBERON:0010286,1.68e-14,4;UBERON:0000473,1.70e-11,14;UBERON:0003135,1.00e-10,15;UBERON:0003101,4.73e-10,16;UBERON:0000079,4.73e-10,16;UBERON:0004176,1.87e-09,17;UBERON:0009196,1.87e-09,17;UBERON:0009117,1.87e-09,17;UBERON:0002038,4.24e-09,3;UBERON:0009663,4.24e-09,3;UBERON:0009661,4.24e-09,3;UBERON:0000125,4.24e-09,3;UBERON:0002308,4.24e-09,3;UBERON:0000991,6.33e-09,18;UBERON:0005564,6.33e-09,18;UBERON:0002259,1.33e-07,1;UBERON:0002314,1.33e-07,1;UBERON:0004061,1.33e-07,1;UBERON:0006777,1.33e-07,1;UBERON:0005882,1.33e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.1785065520309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.921639199537461,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,4.0728881838208,0,0,0,0,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.49790639404823,0,0,0,0,1.0389402227978,0,0.305518091550949,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.317838813675,0,0,0.583353565032143,0.129159823477731,0.168956125490778,0.352071715937262,1.0416350787516,1.46803082195995,131.904929970999,168.785583667109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p5@Ppp3ca}} | ||
|EntrezGene=19055 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q8C649 | |||
|association_with_transcript=0bp_to_uc008rmi.1_5end | |||
|description=CAGE_peak_5_at_Ppp3ca_5end | |||
|id=chr3:136565991..136566033,+ | |||
|ontology_enrichment_celltype=CL:0002614!1.18e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,4.24e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!8.33e-23!17;UBERON:0009196!8.33e-23!17;UBERON:0009117!8.33e-23!17;UBERON:0003135!1.87e-22!15;UBERON:0000991!2.23e-21!18;UBERON:0005564!2.23e-21!18;UBERON:0003101!6.90e-21!16;UBERON:0000079!6.90e-21!16;UBERON:0000473!1.87e-20!14;UBERON:0003133!8.22e-18!24;UBERON:0005156!3.36e-16!26;UBERON:0000990!3.36e-16!26;UBERON:0002298!7.70e-16!6;UBERON:0002950!3.91e-11!4;UBERON:0001891!3.91e-11!4;UBERON:0009616!3.91e-11!4;UBERON:0003886!4.11e-10!38;UBERON:0002553!8.92e-10!39;UBERON:0002323!5.97e-09!37;UBERON:0004458!5.97e-09!37;UBERON:0002038!1.18e-08!3;UBERON:0002308!1.18e-08!3;UBERON:0009663!1.18e-08!3;UBERON:0009661!1.18e-08!3;UBERON:0006331!1.18e-08!3;UBERON:0000125!1.18e-08!3;UBERON:0001301!7.83e-08!3;UBERON:0006555!7.83e-08!3;UBERON:0005103!7.83e-08!3;UBERON:0000083!7.83e-08!3;UBERON:0009201!7.83e-08!3;UBERON:0004819!7.83e-08!3;UBERON:0006553!7.83e-08!3;UBERON:0003074!7.83e-08!3;UBERON:0003060!7.83e-08!3;UBERON:0000464!9.82e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.68e-14,4;UBERON:0001891,1.68e-14,4;UBERON:0009616,1.68e-14,4;UBERON:0010286,1.68e-14,4;UBERON:0000473,1.70e-11,14;UBERON:0003135,1.00e-10,15;UBERON:0003101,4.73e-10,16;UBERON:0000079,4.73e-10,16;UBERON:0004176,1.87e-09,17;UBERON:0009196,1.87e-09,17;UBERON:0009117,1.87e-09,17;UBERON:0002038,4.24e-09,3;UBERON:0009663,4.24e-09,3;UBERON:0009661,4.24e-09,3;UBERON:0000125,4.24e-09,3;UBERON:0002308,4.24e-09,3;UBERON:0000991,6.33e-09,18;UBERON:0005564,6.33e-09,18;UBERON:0002259,1.33e-07,1;UBERON:0002314,1.33e-07,1;UBERON:0004061,1.33e-07,1;UBERON:0006777,1.33e-07,1;UBERON:0005882,1.33e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.1785065520309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.766124028511126,0.921639199537461,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,4.0728881838208,0,0,0,0,0,0,0,0,0,0,5.93756174539112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.49790639404823,0,0,0,0,1.0389402227978,0,0.305518091550949,0.373220911830279,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,268.317838813675,0,0,0.583353565032143,0.129159823477731,0.168956125490778,0.352071715937262,1.0416350787516,1.46803082195995,131.904929970999,168.785583667109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p5@Ppp3ca | |||
}} |
Revision as of 01:38, 14 September 2013
Short description: | p5@Ppp3ca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ppp3ca_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_uc008rmi.1_5end |
EntrezGene: | Ppp3ca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 4.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 1.68e-14 | 4 |
midbrain | 1.68e-14 | 4 |
presumptive midbrain | 1.68e-14 | 4 |
midbrain neural tube | 1.68e-14 | 4 |
testis | 1.70e-11 | 14 |
male reproductive organ | 1.00e-10 | 15 |
male organism | 4.73e-10 | 16 |
male reproductive system | 4.73e-10 | 16 |
external genitalia | 1.87e-09 | 17 |
indifferent external genitalia | 1.87e-09 | 17 |
indifferent gonad | 1.87e-09 | 17 |
substantia nigra | 4.24e-09 | 3 |
telencephalic nucleus | 4.24e-09 | 3 |
midbrain nucleus | 4.24e-09 | 3 |
neural nucleus | 4.24e-09 | 3 |
nucleus of brain | 4.24e-09 | 3 |
gonad | 6.33e-09 | 18 |
gonad primordium | 6.33e-09 | 18 |
corpora quadrigemina | 1.33e-07 | 1 |
midbrain tectum | 1.33e-07 | 1 |
neural tube mantle layer | 1.33e-07 | 1 |
tectal plate | 1.33e-07 | 1 |
neural tube alar plate | 1.33e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.