FFCP PHASE1:Mm9::chr3:19880589..19880598,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12870|HGNC=|MCL_coexpression_id=5|UniProt=G3UZ53|association_with_transcript=-29bp_to_ENSMUST00000172605_5end|description=CAGE_peak_22_at_Cp_5end|id=chr3:19880589..19880598,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-18,5;CL:0002610,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!8.27e-15!25;UBERON:0002330!8.27e-15!25;UBERON:0002107!2.04e-14!22;UBERON:0007499!2.04e-14!22;UBERON:0006925!2.04e-14!22;UBERON:0009497!2.04e-14!22;UBERON:0000015!2.04e-14!22;UBERON:0002423!2.04e-14!22;UBERON:0006235!2.04e-14!22;UBERON:0008835!2.04e-14!22;UBERON:0003894!2.04e-14!22;UBERON:0004161!2.04e-14!22;UBERON:0008836!2.04e-14!22;UBERON:0009854!1.09e-13!23;UBERON:0009856!1.09e-13!23;UBERON:0003914!9.52e-11!47;UBERON:0005256!9.52e-11!47;UBERON:0009569!6.14e-09!66;UBERON:0000466!6.85e-09!79;UBERON:0005172!2.18e-07!49;UBERON:0005173!2.18e-07!49;UBERON:0002417!2.18e-07!49;UBERON:0000916!2.18e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.78e-10,22;UBERON:0007499,7.78e-10,22;UBERON:0006925,7.78e-10,22;UBERON:0009497,7.78e-10,22;UBERON:0000015,7.78e-10,22;UBERON:0002423,7.78e-10,22;UBERON:0006235,7.78e-10,22;UBERON:0008835,7.78e-10,22;UBERON:0003894,7.78e-10,22;UBERON:0004161,7.78e-10,22;UBERON:0008836,7.78e-10,22;UBERON:0009854,1.91e-09,23;UBERON:0009856,1.91e-09,23;UBERON:0002365,9.29e-09,25;UBERON:0002330,9.29e-09,25;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,1.29955283489534,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.486405680325106,0.549122826376163,30.1913233707445,0.744281895337007,0.624075346229121,0.757736633841335,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p22@Cp}} | ||
|EntrezGene=12870 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|UniProt=G3UZ53 | |||
|association_with_transcript=-29bp_to_ENSMUST00000172605_5end | |||
|description=CAGE_peak_22_at_Cp_5end | |||
|id=chr3:19880589..19880598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-18,5;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!8.27e-15!25;UBERON:0002330!8.27e-15!25;UBERON:0002107!2.04e-14!22;UBERON:0007499!2.04e-14!22;UBERON:0006925!2.04e-14!22;UBERON:0009497!2.04e-14!22;UBERON:0000015!2.04e-14!22;UBERON:0002423!2.04e-14!22;UBERON:0006235!2.04e-14!22;UBERON:0008835!2.04e-14!22;UBERON:0003894!2.04e-14!22;UBERON:0004161!2.04e-14!22;UBERON:0008836!2.04e-14!22;UBERON:0009854!1.09e-13!23;UBERON:0009856!1.09e-13!23;UBERON:0003914!9.52e-11!47;UBERON:0005256!9.52e-11!47;UBERON:0009569!6.14e-09!66;UBERON:0000466!6.85e-09!79;UBERON:0005172!2.18e-07!49;UBERON:0005173!2.18e-07!49;UBERON:0002417!2.18e-07!49;UBERON:0000916!2.18e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.78e-10,22;UBERON:0007499,7.78e-10,22;UBERON:0006925,7.78e-10,22;UBERON:0009497,7.78e-10,22;UBERON:0000015,7.78e-10,22;UBERON:0002423,7.78e-10,22;UBERON:0006235,7.78e-10,22;UBERON:0008835,7.78e-10,22;UBERON:0003894,7.78e-10,22;UBERON:0004161,7.78e-10,22;UBERON:0008836,7.78e-10,22;UBERON:0009854,1.91e-09,23;UBERON:0009856,1.91e-09,23;UBERON:0002365,9.29e-09,25;UBERON:0002330,9.29e-09,25;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15881276655127,1.29955283489534,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.486405680325106,0.549122826376163,30.1913233707445,0.744281895337007,0.624075346229121,0.757736633841335,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@Cp | |||
}} |
Revision as of 01:58, 14 September 2013
Short description: | p22@Cp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_Cp_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -29bp_to_ENSMUST00000172605_5end |
EntrezGene: | Cp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.13e-18 | 5 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 7.78e-10 | 22 |
epithelial sac | 7.78e-10 | 22 |
digestive gland | 7.78e-10 | 22 |
epithelium of foregut-midgut junction | 7.78e-10 | 22 |
anatomical boundary | 7.78e-10 | 22 |
hepatobiliary system | 7.78e-10 | 22 |
foregut-midgut junction | 7.78e-10 | 22 |
hepatic diverticulum | 7.78e-10 | 22 |
liver primordium | 7.78e-10 | 22 |
septum transversum | 7.78e-10 | 22 |
liver bud | 7.78e-10 | 22 |
digestive tract diverticulum | 1.91e-09 | 23 |
sac | 1.91e-09 | 23 |
exocrine gland | 9.29e-09 | 25 |
exocrine system | 9.29e-09 | 25 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.