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FFCP PHASE1:Mm9::chr3:75360711..75360793,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=56426|HGNC=|MCL_coexpression_id=895|UniProt=F8WI55,Q8VE70|association_with_transcript=0bp_to_ENSMUST00000029424,ENSMUST00000159217,ENSMUST00000161137,NM_019745,uc008pnc.1_5end|description=CAGE_peak_1_at_Pdcd10_5end|id=chr3:75360711..75360793,-|ontology_enrichment_celltype=CL:0000838!1.50e-07!12;CL:0000988!5.53e-07!32;CL:0002032!5.53e-07!32;CL:0000037!5.53e-07!32;CL:0000566!5.53e-07!32;CL:0000837!5.53e-07!32;CL:0000084!6.65e-07!11;CL:0000827!6.65e-07!11|ontology_enrichment_celltype_v019_2=CL:0000838,1.50e-07,12;CL:0000988,5.53e-07,32;CL:0002032,5.53e-07,32;CL:0000037,5.53e-07,32;CL:0000837,5.53e-07,32;CL:0000084,6.65e-07,11;CL:0000827,6.65e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.92e-10!130;UBERON:0000925!8.92e-10!130;UBERON:0006595!8.92e-10!130;UBERON:0001007!2.06e-09!128;UBERON:0001555!2.06e-09!128;UBERON:0007026!2.06e-09!128;UBERON:0004921!8.77e-09!126;UBERON:0004185!8.77e-09!126;UBERON:0002193!1.19e-08!48;UBERON:0001004!1.35e-07!42;UBERON:0000065!1.42e-07!41;UBERON:0002390!1.87e-07!45;UBERON:0003061!1.87e-07!45;UBERON:0002405!1.88e-07!70;UBERON:0003104!3.35e-07!131;UBERON:0009142!3.35e-07!131;UBERON:0004177!7.06e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.69e-13,118;UBERON:0000925,7.69e-13,118;UBERON:0006595,7.69e-13,118;UBERON:0001007,1.95e-12,116;UBERON:0001555,1.95e-12,116;UBERON:0007026,1.95e-12,116;UBERON:0004921,1.05e-11,114;UBERON:0002193,1.19e-08,48;UBERON:0002405,1.19e-08,48;UBERON:0001041,6.08e-08,80;UBERON:0001004,1.35e-07,42;UBERON:0000065,1.42e-07,41;UBERON:0002390,1.87e-07,45;UBERON:0003061,1.87e-07,45;UBERON:0000077,2.23e-07,35;UBERON:0004177,7.06e-07,29;UBERON:0005057,7.06e-07,29|phase1_expression=20.4990524294136,59.3258192986914,53.6899102479653,22.9872800593191,25.0447864973174,25.3497700586954,28.0335168714631,70.8887045694254,86.16269795682,75.6028420020039,58.5565451331227,53.2080300498894,84.2307591261532,76.0557501045277,27.6481102307,56.0856490669818,44.7719602002014,87.0675576388736,85.559406569981,72.9950201092612,32.8267099983129,50.5390941612506,39.7023679491182,47.6777419924352,47.9465397430385,47.0870210574317,63.322013435384,74.9839889746894,68.0283841653819,62.2514420507029,65.8539616646255,4.44521471421742,9.22597181376855,0,21.6638714813456,27.4287164841512,18.9877501324003,143.137817712022,137.515020636189,167.527598071615,139.999094151381,122.265141807562,162.645968265436,23.4168081434574,24.026332699025,25.1459050461504,5.47673941043627,14.3896603211095,13.6205433295373,23.5260177879883,15.1185335355392,11.5002051491977,92.6159985438705,64.5572306390096,64.5300094353531,34.9872833008888,28.3668105539369,30.9403255366465,11.9366711907163,13.7537654610729,5.07065122804943,9.82649143000483,5.33576877666684,19.7977937801908,21.7550599764734,19.1829631035447,9.58720353658895,8.4528027170742,16.4866483570479,15.1206650931494,17.0363218694619,17.1390590642282,22.9703282589678,16.5362578940188,18.0189485514284,19.3035945188104,11.0115880999389,18.1316020080967,20.2760623898241,12.7929699098288,19.4868680873133,11.4600941522487,19.2636269310953,28.138130501584,18.3357897332172,13.5529149317887,29.3285662446152,15.0983551118493,61.2624904065459,37.8613516134995,46.0884537035668,24.9522924324602,38.078394687634,12.9528765993076,23.3919510281161,19.7131830322828,30.0551059081949,29.654876128582,31.9536785661529,20.8470348961101,29.1545878937729,3.84979432242953,2.54805239706646,7.11066703153331,39.1848784230298,42.8178172652917,35.8922355960496,35.1686349534705,103.834091342516,27.6102378660574,23.5940044401945,23.748307308347,32.2861696158482,33.6111488432348,40.3329265475467,31.1653146497595,32.382540773203,39.7648231529757,55.7304647728421,25.3973954417432,31.8011786582967,33.9412677194656,44.7340226923493,23.1296829639122,21.3635640949724,49.0477546000495,65.4190579802325,62.3898840233144,61.6290601304364,25.1648274200102,24.2475319493872,32.6701315493447,28.8548371519179,37.0787413128979,30.3370545056958,29.6901511413996,30.5518091550949,35.0827657120462,36.1393544560155,25.0425808504904,20.9493913169953,18.8519725635448,22.8678904852794,24.866294942893,24.8333221902347,25.1102891758306,20.5206776785806,24.3181168494675,16.1675994699632,21.5580931391314,22.8736461413134,24.5499220318884,23.9120634334014,27.5119211552512,30.0441919155597,20.1024609486678,58.2836945469985,51.7269293300578,45.4661599032948,16.3629360303046,22.045449638223,24.668502420159,20.8335367314985,17.5120166255189,24.6827380619805,20.6955210827863,20.9253253091703,24.0536605276369,21.5573403386659,25.2817894681807,23.1856795301147,22.8071980383518,30.7370161407471,24.8281874706688,29.6508827475419,34.2672359223017,89.5434901886093,44.692145766139,22.3952663061996,22.9914305141834,22.5518057313663,22.1851877085677,32.4671944013511,32.5285820652476,44.1312027236396,36.7278669034544,39.7109629904426,44.1683367931355,42.1122428177299,46.7386092500195,53.8183744187989,53.7681437786791,24.2774913219945,2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|EntrezGene=56426
|HGNC=
|MCL_coexpression_id=895
|UniProt=F8WI55,Q8VE70
|association_with_transcript=0bp_to_ENSMUST00000029424,ENSMUST00000159217,ENSMUST00000161137,NM_019745,uc008pnc.1_5end
|description=CAGE_peak_1_at_Pdcd10_5end
|id=chr3:75360711..75360793,-
|ontology_enrichment_celltype=CL:0000838!1.50e-07!12;CL:0000988!5.53e-07!32;CL:0002032!5.53e-07!32;CL:0000037!5.53e-07!32;CL:0000566!5.53e-07!32;CL:0000837!5.53e-07!32;CL:0000084!6.65e-07!11;CL:0000827!6.65e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000838,1.50e-07,12;CL:0000988,5.53e-07,32;CL:0002032,5.53e-07,32;CL:0000037,5.53e-07,32;CL:0000837,5.53e-07,32;CL:0000084,6.65e-07,11;CL:0000827,6.65e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.92e-10!130;UBERON:0000925!8.92e-10!130;UBERON:0006595!8.92e-10!130;UBERON:0001007!2.06e-09!128;UBERON:0001555!2.06e-09!128;UBERON:0007026!2.06e-09!128;UBERON:0004921!8.77e-09!126;UBERON:0004185!8.77e-09!126;UBERON:0002193!1.19e-08!48;UBERON:0001004!1.35e-07!42;UBERON:0000065!1.42e-07!41;UBERON:0002390!1.87e-07!45;UBERON:0003061!1.87e-07!45;UBERON:0002405!1.88e-07!70;UBERON:0003104!3.35e-07!131;UBERON:0009142!3.35e-07!131;UBERON:0004177!7.06e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.69e-13,118;UBERON:0000925,7.69e-13,118;UBERON:0006595,7.69e-13,118;UBERON:0001007,1.95e-12,116;UBERON:0001555,1.95e-12,116;UBERON:0007026,1.95e-12,116;UBERON:0004921,1.05e-11,114;UBERON:0002193,1.19e-08,48;UBERON:0002405,1.19e-08,48;UBERON:0001041,6.08e-08,80;UBERON:0001004,1.35e-07,42;UBERON:0000065,1.42e-07,41;UBERON:0002390,1.87e-07,45;UBERON:0003061,1.87e-07,45;UBERON:0000077,2.23e-07,35;UBERON:0004177,7.06e-07,29;UBERON:0005057,7.06e-07,29
|phase1_expression=20.4990524294136,59.3258192986914,53.6899102479653,22.9872800593191,25.0447864973174,25.3497700586954,28.0335168714631,70.8887045694254,86.16269795682,75.6028420020039,58.5565451331227,53.2080300498894,84.2307591261532,76.0557501045277,27.6481102307,56.0856490669818,44.7719602002014,87.0675576388736,85.559406569981,72.9950201092612,32.8267099983129,50.5390941612506,39.7023679491182,47.6777419924352,47.9465397430385,47.0870210574317,63.322013435384,74.9839889746894,68.0283841653819,62.2514420507029,65.8539616646255,4.44521471421742,9.22597181376855,0,21.6638714813456,27.4287164841512,18.9877501324003,143.137817712022,137.515020636189,167.527598071615,139.999094151381,122.265141807562,162.645968265436,23.4168081434574,24.026332699025,25.1459050461504,5.47673941043627,14.3896603211095,13.6205433295373,23.5260177879883,15.1185335355392,11.5002051491977,92.6159985438705,64.5572306390096,64.5300094353531,34.9872833008888,28.3668105539369,30.9403255366465,11.9366711907163,13.7537654610729,5.07065122804943,9.82649143000483,5.33576877666684,19.7977937801908,21.7550599764734,19.1829631035447,9.58720353658895,8.4528027170742,16.4866483570479,15.1206650931494,17.0363218694619,17.1390590642282,22.9703282589678,16.5362578940188,18.0189485514284,19.3035945188104,11.0115880999389,18.1316020080967,20.2760623898241,12.7929699098288,19.4868680873133,11.4600941522487,19.2636269310953,28.138130501584,18.3357897332172,13.5529149317887,29.3285662446152,15.0983551118493,61.2624904065459,37.8613516134995,46.0884537035668,24.9522924324602,38.078394687634,12.9528765993076,23.3919510281161,19.7131830322828,30.0551059081949,29.654876128582,31.9536785661529,20.8470348961101,29.1545878937729,3.84979432242953,2.54805239706646,7.11066703153331,39.1848784230298,42.8178172652917,35.8922355960496,35.1686349534705,103.834091342516,27.6102378660574,23.5940044401945,23.748307308347,32.2861696158482,33.6111488432348,40.3329265475467,31.1653146497595,32.382540773203,39.7648231529757,55.7304647728421,25.3973954417432,31.8011786582967,33.9412677194656,44.7340226923493,23.1296829639122,21.3635640949724,49.0477546000495,65.4190579802325,62.3898840233144,61.6290601304364,25.1648274200102,24.2475319493872,32.6701315493447,28.8548371519179,37.0787413128979,30.3370545056958,29.6901511413996,30.5518091550949,35.0827657120462,36.1393544560155,25.0425808504904,20.9493913169953,18.8519725635448,22.8678904852794,24.866294942893,24.8333221902347,25.1102891758306,20.5206776785806,24.3181168494675,16.1675994699632,21.5580931391314,22.8736461413134,24.5499220318884,23.9120634334014,27.5119211552512,30.0441919155597,20.1024609486678,58.2836945469985,51.7269293300578,45.4661599032948,16.3629360303046,22.045449638223,24.668502420159,20.8335367314985,17.5120166255189,24.6827380619805,20.6955210827863,20.9253253091703,24.0536605276369,21.5573403386659,25.2817894681807,23.1856795301147,22.8071980383518,30.7370161407471,24.8281874706688,29.6508827475419,34.2672359223017,89.5434901886093,44.692145766139,22.3952663061996,22.9914305141834,22.5518057313663,22.1851877085677,32.4671944013511,32.5285820652476,44.1312027236396,36.7278669034544,39.7109629904426,44.1683367931355,42.1122428177299,46.7386092500195,53.8183744187989,53.7681437786791,24.2774913219945,24.5634302110917,31.5581659884625,24.641810669283,27.9291581521381,30.4389458323983,31.4917954878801,30.9981310757165,33.2837303023715,33.5640285867297,26.0878311836691,35.0374722003798,32.0391162034521,39.1260075549646,33.471920029103,28.7000820105376,29.0273471030819,32.7973596693924,35.1833442101827,26.907018492432,21.5652309791032,35.7255309761763,27.7713529071959,24.752730038817,24.577445652502,32.806159452709,46.3730507318178,22.3599865889172,27.0521860893763,24.9525276089527,25.5812370634467,32.4962139437123,38.8011134644202,39.2218632194176,42.2462186204592,40.0851088264283,34.7611395673322,42.2767351966604,40.7536557203514,44.5519100431056,46.7452980211744,49.4954172275026,25.0799779239708,33.1124095565679,30.5046120976805,39.7347617547569,23.7705670796179,18.935319540328,28.0802315280468,30.0637833108412,22.1886099664783,22.4630670075399,20.4974780155803,18.6830510320629,27.9319384155677,27.179794785752,26.4842811224171,28.5975971615408,24.2717545706139,11.5742642383716,25.8990265372186,25.2404288147979,21.2392221343941,23.5497217070332,25.3951787850391,27.3477365646052,9.7449624650655,23.9799415396263,31.2698234733548,18.9037539328303,21.3898427030833,21.1744627816997,27.4088382294997,15.470331487228,25.1925308257803,28.0895306688844,10.3486947026204,22.2910516432856,31.5665615883247,19.4422011186257,17.9358432456312,13.0919928119278,38.0168167063211,33.6812992673474,28.8892201452,33.8016818530034,39.0743912604091,38.9621495035887,32.9467669448657,40.0503795377949,44.0136063311075,33.3765543618917,43.7429454842503,26.2111322313293,39.4464343297486,45.9619035091446,45.5191778311014,46.6707473341306,77.6801425071919,67.3166485676795,77.1155853828685,41.0508365746499,18.8219916180776,25.4149333908561,28.0813886136683,29.2723614420256,25.3300573945566,34.5252726745141,33.0613822901344,41.3574388334767,43.809860972626,31.0669656543463,80.044397293155,23.0255480907727,20.8477697975943,21.1951795295012,22.3446494616475,22.4711646902735,31.9211689116451,24.4784243506626,34.6035836604846,43.4851417486811,43.2045009386798,65.4143019700329,24.5297510501099,30.5051542779537,38.0668011324939,44.7566739168704,42.5178099231907,48.9195479546273,50.8051973480546,63.4069305674367,57.0026913779399,58.3783611942307,60.1315124164272,60.9020957583285,67.4379725587653,37.4105132965099,16.8709324564289,13.0982230649835,20.3140385800535,29.9443870749895,33.4074806303104,30.403169628366,31.2977833455436,29.0911820340511,23.7195773899168,24.3972375348804,28.0718801585304,25.7779773515531,15.7568979547248,29.4603619981983,24.300810008345,19.3638117386415,24.469690085147,17.6038505995619,19.9271707361619,21.9463680370567,23.9027048055788,25.2830985751026,21.1709294254262,13.9721066422011,26.4473606083922,25.7543821548618,20.859748623468,22.9954462705056,22.0526990904509,22.4465346249431,22.3803202853019,22.2167278844896,26.9372349401826,24.2909782554368,21.5544846257431,22.7632880147172,25.549325849805,21.6382412597564,20.2292858907395,25.5565160869446,25.0357999444687,19.7671126619967,22.209813778018,20.8998081492441,22.500140663351,21.5717163379031,24.7163487199468,20.7622640513363,21.2356682442272,21.2769681931217,20.0523211153148,28.1985050958458,20.8339139859633,10.4920442733937,22.4574344107592,30.0819475667618,29.8409798027396,30.2210244193736,33.6208361649611
|short_description=p1@Pdcd10
}}

Revision as of 02:32, 14 September 2013

Short description:p1@Pdcd10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdcd10_5end
Coexpression cluster:MCL_coexpression_mm9:895
Association with transcript: 0bp_to_ENSMUST00000029424, ENSMUST00000159217, ENSMUST00000161137, NM_019745, uc008pnc.1_5end
EntrezGene:Pdcd10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdcd10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I559.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I653.69
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.99
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E970.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E786.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F275.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E658.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F153.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E484.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E876.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A356.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.77
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A287.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A485.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A673.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H250.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I939.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D147.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D247.95
GP2+ M cell, pool1.CNhs13228.11845-124H947.09
GP2+ M cell, pool2.CNhs13231.11846-124I163.32
GP2+ M cell, pool3.CNhs13240.11847-124I274.98
Ileum epithelium, pool1.CNhs13199.10252-104B968.03
Ileum epithelium, pool2.CNhs13232.10253-104C162.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C865.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.66
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.43
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8143.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1137.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3167.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9140.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2122.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4162.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.62
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A292.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I964.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A164.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C134.99
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.94
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.12
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.54
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.10
Mouse Schwann, donor1.CNhs12507.11728-123D961.26
Mouse Schwann, donor2.CNhs12573.11746-123F937.86
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G346.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C438.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I729.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E331.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G629.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G139.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G242.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.17
accessory axillary lymph node, adult.CNhs10475.1063-29H9103.83
adrenal gland, adult.CNhs10508.49-24D727.61
adrenal gland, embryo E14.CNhs11038.406-44C523.59
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I132.29
adrenal gland, embryo E18.CNhs11026.1262-18F533.61
adrenal gland, neonate N00.CNhs11191.1311-23C140.33
adrenal gland, neonate N25.CNhs11223.1377-27I331.17
amnion, adult pregnant day17.5.CNhs10488.583-22A832.38
aorta, adult.CNhs10498.46-23H139.76
bone (os femoris), adult.CNhs10483.56-12G255.73
bone (os femoris), neonate N02.CNhs11227.1985-43F525.40
bone (os femoris), neonate N16.CNhs11225.1525-43A631.80
bone (os femoris), neonate N20.CNhs11195.1350-25C333.94
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B223.13
cerebellum, neonate N30.CNhs11135.1395-42I221.36
colon, adult.CNhs10468.36-18H749.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C765.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D162.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D461.63
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F132.67
cortex, adult.CNhs10473.12-14D528.85
cortex, neonate N30.CNhs11107.1392-42F237.08
diencephalon, adult.CNhs10482.20-12F230.34
diencephalon, neonate N30.CNhs11201.1388-42B229.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B130.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A235.08
epididymis, adult.CNhs10490.58-23B236.14
eyeball, adult.CNhs10484.31-12G425.04
eyeball, embryo E12.CNhs11016.345-16C620.95
eyeball, embryo E14.CNhs10521.399-16E218.85
eyeball, embryo E15.CNhs10593.426-16C922.87
eyeball, embryo E17.CNhs11023.1261-18D424.87
eyeball, neonate N00.CNhs11207.633-15C624.83
eyeball, neonate N01.CNhs11140.1532-43E725.11
eyeball, neonate N02.CNhs11205.1551-44G820.52
eyeball, neonate N16.CNhs11188.777-19A224.32
forelimb, embryo E11.CNhs10596.335-25E216.17
forelimb, embryo E12.CNhs10600.359-14H221.56
forelimb, embryo E13.CNhs10589.384-1E222.87
forelimb, embryo E14.CNhs10577.413-26A824.55
forelimb, embryo E15.CNhs11007.437-20E723.91
forelimb, embryo E17.CNhs10598.1517-43C427.51
forelimb, embryo E18.CNhs11008.1520-43B530.04
gonad, embryo E13.CNhs11044.1564-45I620.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C858.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D251.73
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D545.47
heart, embryo E11.CNhs10586.331-24E916.36
heart, embryo E12.CNhs11015.353-12F522.05
heart, embryo E13.CNhs11013.376-3I924.67
heart, embryo E14.CNhs10597.403-26D420.83
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C624.68
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G320.93
heart, neonate N00.CNhs11213.639-21E324.05
heart, neonate N03.CNhs11221.1349-25I221.56
heart, neonate N10.CNhs11118.749-24G125.28
heart, neonate N16.CNhs11209.782-15G123.19
heart, neonate N20.CNhs11127.821-26I622.81
heart, neonate N25.CNhs11196.1351-25D330.74
heart, neonate N30.CNhs11202.1390-42D224.83
hippocampus, adult.CNhs10478.13-16E829.65
hippocampus, neonate N00.CNhs11228.627-43G134.27
intestinal mucosa, adult.CNhs10506.860-29I389.54
intestine, adult.CNhs10496.178-9A344.69
intestine, embryo E12.CNhs11019.1251-16I522.40
intestine, embryo E13.CNhs11010.381-16D522.99
intestine, embryo E15.CNhs10602.976-16D822.55
intestine, embryo E16.CNhs10585.463-22H422.19
intestine, embryo E17.CNhs10582.482-18D332.47
intestine, embryo E18.CNhs10526.1289-20F732.53
intestine, neonate N00.CNhs11126.644-26D144.13
intestine, neonate N01.CNhs11192.1322-23E936.73
intestine, neonate N06.CNhs11102.688-20B839.71
intestine, neonate N07.CNhs11095.720-20F244.17
intestine, neonate N10.CNhs11098.755-23A542.11
intestine, neonate N20.CNhs11187.827-18D146.74
intestine, neonate N25.CNhs11121.1352-25E353.82
intestine, neonate N30.CNhs11131.1384-42G153.77
kidney, embryo E14.CNhs10606.411-4I924.28
kidney, embryo E15.CNhs10997.434-16F824.56
kidney, embryo E16.CNhs10584.464-22A531.56
kidney, embryo E17.CNhs11028.483-18I224.64
kidney, embryo E18.CNhs11001.1288-20C727.93
kidney, neonate N00.CNhs11214.646-21G730.44
kidney, neonate N10.CNhs11206.758-6D531.49
kidney, neonate N20.CNhs11113.832-19I131.00
kidney, neonate N25.CNhs11122.1353-25F333.28
kidney, neonate N30.CNhs11203.1385-42H133.56
liver, adult pregnant day01.CNhs10466.508-5B226.09
liver, embryo E12.CNhs10601.355-15F835.04
liver, embryo E13.CNhs10524.378-3H632.04
liver, embryo E14.CNhs10594.409-16E139.13
liver, embryo E15.CNhs10520.433-16D733.47
liver, embryo E16.CNhs10523.462-17F528.70
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G432.80
liver, neonate N00.CNhs11117.641-24F435.18
liver, neonate N03.CNhs11123.1345-25G226.91
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H235.73
liver, neonate N10.CNhs11115.751-24B927.77
liver, neonate N20.CNhs11220.823-25A324.75
liver, neonate N25.CNhs11198.1368-26H124.58
liver, neonate N30.CNhs11106.1382-42D132.81
lung, adult.CNhs10474.28-22B146.37
lung, embryo E12.CNhs10522.354-16G222.36
lung, embryo E14.CNhs10604.404-26F827.05
lung, embryo E15.CNhs11020.432-17C524.95
lung, embryo E16.CNhs10998.458-17B625.58
lung, embryo E17.CNhs10605.480-44A632.50
lung, embryo E18.CNhs10583.1287-20I638.80
lung, neonate N00.CNhs11224.640-42C639.22
lung, neonate N06.CNhs11212.683-20E542.25
lung, neonate N07.CNhs11111.715-19A340.09
lung, neonate N10.CNhs11219.750-23E634.76
lung, neonate N20.CNhs11109.822-18A442.28
lung, neonate N25.CNhs11119.1359-25C740.75
lung, neonate N30.CNhs11133.1394-42H244.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A149.50
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H233.11
medulla oblongata, adult.CNhs10477.17-12C230.50
medulla oblongata, neonate N30.CNhs11200.1396-42A339.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.94
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.08
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I724.27
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I425.90
oviduct, adult pregnant day01.CNhs10500.988-6G625.24
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F423.55
pancreas, embryo E15.CNhs11042.1556-45F225.40
pancreas, embryo E16.CNhs11003.460-26E527.35
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I723.98
pancreas, neonate N00.CNhs11105.645-26G931.27
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D821.39
pancreas, neonate N16.CNhs11136.787-43B621.17
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G825.19
pituitary gland, embryo E12.CNhs11018.346-16E628.09
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A522.29
pituitary gland, embryo E15.CNhs10592.427-16B931.57
pituitary gland, embryo E16.CNhs11036.449-43F619.44
pituitary gland, embryo E17.CNhs11039.1265-44F517.94
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I738.02
placenta, adult pregnant day17.CNhs10464.577-18G333.68
prostate, adult.CNhs10470.859-1F828.89
skin, adult.CNhs10492.30-1C333.80
skin, neonate N00.CNhs11124.650-25G439.07
skin, neonate N03.CNhs11215.662-22H338.96
skin, neonate N06.CNhs11097.693-20I532.95
skin, neonate N10.CNhs11108.762-6C440.05
small intestine, neonate N16.CNhs11114.790-21I144.01
spinal cord, adult.CNhs10505.24-13C933.38
spleen, adult.CNhs10465.25-2G243.74
spleen, embryo E16.CNhs11035.461-43C126.21
spleen, embryo E18.CNhs11011.1271-21F239.45
spleen, neonate N10.CNhs11116.752-24D145.96
spleen, neonate N20.CNhs11112.824-19H145.52
spleen, neonate N25.CNhs11099.1354-25G346.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C677.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C967.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D377.12
stomach, adult.CNhs10503.33-1H641.05
stomach, embryo E12.CNhs10588.356-43E318.82
stomach, embryo E15.CNhs10603.1252-16G825.41
stomach, embryo E16.CNhs11022.459-17D428.08
stomach, embryo E17.CNhs11006.1035-18D529.27
stomach, embryo E18.CNhs10999.1286-20C625.33
stomach, neonate N03.CNhs11193.1340-24B834.53
stomach, neonate N07.CNhs11210.718-18A933.06
stomach, neonate N25.CNhs11104.1355-25E441.36
stomach, neonate N30.CNhs11134.1386-42I143.81
submandibular gland, adult.CNhs10469.59-29C131.07
testis, adult.CNhs10504.57-7G580.04
testis, embryo E13.CNhs11031.389-23F523.03
testis, embryo E15.CNhs11034.443-27C520.85
testis, embryo E16.CNhs11033.470-26G521.20
testis, embryo E17.CNhs11029.486-18I522.34
testis, embryo E18.CNhs11027.503-18G522.47
testis, neonate N00.CNhs11189.1300-22B731.92
testis, neonate N07.CNhs11222.726-26I424.48
testis, neonate N10.CNhs11204.763-44D934.60
testis, neonate N20.CNhs11110.839-18H343.49
testis, neonate N30.CNhs11130.1391-42E243.20
thymus, adult.CNhs10471.38-12B565.41
thymus, embryo E14.CNhs11041.402-44I424.53
thymus, embryo E15.CNhs11005.430-45I230.51
thymus, embryo E16.CNhs11002.456-26C538.07
thymus, embryo E17.CNhs10581.478-18C144.76
thymus, embryo E18.CNhs10595.1273-19G442.52
thymus, neonate N02.CNhs11181.1541-43F848.92
thymus, neonate N03.CNhs11137.2104-43C750.81
thymus, neonate N06.CNhs11197.681-26C463.41
thymus, neonate N07.CNhs11211.713-19D357.00
thymus, neonate N10.CNhs11194.748-24E458.38
thymus, neonate N20.CNhs11186.820-7A260.13
thymus, neonate N25.CNhs11125.1362-25G760.90
thymus, neonate N30.CNhs11132.1393-42G267.44
tongue, adult.CNhs10499.32-1B437.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.31
urinary bladder, adult.CNhs10481.879-12E429.94
uterus, adult pregnant day19.CNhs10497.590-15F533.41
uterus, adult.CNhs10509.92-27E530.40
vagina, adult.CNhs10502.89-27D531.30
vesicular gland, adult.CNhs10491.51-27F829.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I819.93
whole body, embryo E12.CNhs10587.857-27C921.95
whole body, embryo E13.CNhs10512.372-23H223.90
whole body, embryo E14.5.CNhs10578.420-27D225.28
whole body, embryo E14.CNhs10519.395-14B121.17
whole body, embryo E16.CNhs10514.453-14F213.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.76
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.64
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.56
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.20
whole body, embryo E17.5.CNhs10513.490-9F920.83
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B322.46
whole body, neonate N00.CNhs10525.657-19C230.08
whole body, neonate N01.CNhs10576.659-23C629.84
whole body, neonate N06.CNhs10515.692-21D130.22
whole body, neonate N10.CNhs10518.761-6B433.62





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure7.69e-13118
endoderm7.69e-13118
presumptive endoderm7.69e-13118
digestive system1.95e-12116
digestive tract1.95e-12116
primitive gut1.95e-12116
subdivision of digestive tract1.05e-11114
hemolymphoid system1.19e-0848
immune system1.19e-0848
foregut6.08e-0880
respiratory system1.35e-0742
respiratory tract1.42e-0741
hematopoietic system1.87e-0745
blood island1.87e-0745
mixed endoderm/mesoderm-derived structure2.23e-0735
hemopoietic organ7.06e-0729
immune organ7.06e-0729







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