FFCP PHASE1:Mm9::chr3:79690034..79690043,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68659|HGNC=|UniProt=Q3UPI1|association_with_transcript=182bp_to_ENSMUST00000029567,NM_133187,uc008pny.2_5end|description=CAGE_peak_14_at_Fam198b_5end|id=chr3:79690034..79690043,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,1.59e-17,3;CL:0000737,1.59e-17,3;CL:0000746,1.59e-17,3;CL:0000513,1.59e-17,3;CL:0000680,2.87e-09,6;CL:0000187,2.87e-09,6;CL:0000056,2.87e-09,6;CL:0000222,4.45e-08,7;CL:0000217,9.82e-08,2;CL:0000328,9.82e-08,2;CL:0002573,9.82e-08,2;CL:0002376,9.82e-08,2;CL:0000218,9.82e-08,2;CL:0000692,9.82e-08,2;CL:0002377,9.82e-08,2;CL:0002375,9.82e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.41e-17!23;UBERON:0001009!6.41e-17!23;UBERON:0007100!2.23e-14!18;UBERON:0000948!2.23e-14!18;UBERON:0005498!2.23e-14!18;UBERON:0004140!2.23e-14!18;UBERON:0009881!2.23e-14!18;UBERON:0004141!2.23e-14!18;UBERON:0003084!2.23e-14!18;UBERON:0007005!2.23e-14!18;UBERON:0004139!2.23e-14!18;UBERON:0004291!2.23e-14!18;UBERON:0004872!3.65e-13!33;UBERON:0003103!1.77e-09!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.63e-17,18;UBERON:0000948,1.63e-17,18;UBERON:0005498,1.63e-17,18;UBERON:0004140,1.63e-17,18;UBERON:0009881,1.63e-17,18;UBERON:0004141,1.63e-17,18;UBERON:0003084,1.63e-17,18;UBERON:0007005,1.63e-17,18;UBERON:0004139,1.63e-17,18;UBERON:0004291,1.63e-17,18;UBERON:0004535,8.60e-14,23;UBERON:0001009,8.60e-14,23;UBERON:0004872,1.04e-09,33;UBERON:0003103,1.65e-07,43;UBERON:0003914,6.90e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,0.734187008646726,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,1.80081605225163,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.530083353332288,2.26714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0.258937883647172,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.808834249737046,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0,0,0.272145996605311,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,1.24275463521301,0.938104239924385,0.900310307305074,0.946978942340841,1.18058539048442,0.925602677324269,1.16266972375204,0.804820204198858,0.934122738937356,0.493679549740441,0.656669856316381,0.243206428637567,0.146199987425332,0.878200461164203,0.402619256281115,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.169745085775188,0,0.167506257441816,0.714130922658041,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0.655739781506702,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0,0,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,0,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.747582730219894,0.992750942742586,0,0.387479470433193,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0.588795680537589,0,0,0.476872379894642,0,0.282328141245992,0.338458431566706,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,1.32354851471709,0.231867835620421|short_description=p14@Fam198b}} | ||
|EntrezGene=68659 | |||
|HGNC= | |||
|UniProt=Q3UPI1 | |||
|association_with_transcript=182bp_to_ENSMUST00000029567,NM_133187,uc008pny.2_5end | |||
|description=CAGE_peak_14_at_Fam198b_5end | |||
|id=chr3:79690034..79690043,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.59e-17,3;CL:0000737,1.59e-17,3;CL:0000746,1.59e-17,3;CL:0000513,1.59e-17,3;CL:0000680,2.87e-09,6;CL:0000187,2.87e-09,6;CL:0000056,2.87e-09,6;CL:0000222,4.45e-08,7;CL:0000217,9.82e-08,2;CL:0000328,9.82e-08,2;CL:0002573,9.82e-08,2;CL:0002376,9.82e-08,2;CL:0000218,9.82e-08,2;CL:0000692,9.82e-08,2;CL:0002377,9.82e-08,2;CL:0002375,9.82e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.41e-17!23;UBERON:0001009!6.41e-17!23;UBERON:0007100!2.23e-14!18;UBERON:0000948!2.23e-14!18;UBERON:0005498!2.23e-14!18;UBERON:0004140!2.23e-14!18;UBERON:0009881!2.23e-14!18;UBERON:0004141!2.23e-14!18;UBERON:0003084!2.23e-14!18;UBERON:0007005!2.23e-14!18;UBERON:0004139!2.23e-14!18;UBERON:0004291!2.23e-14!18;UBERON:0004872!3.65e-13!33;UBERON:0003103!1.77e-09!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.63e-17,18;UBERON:0000948,1.63e-17,18;UBERON:0005498,1.63e-17,18;UBERON:0004140,1.63e-17,18;UBERON:0009881,1.63e-17,18;UBERON:0004141,1.63e-17,18;UBERON:0003084,1.63e-17,18;UBERON:0007005,1.63e-17,18;UBERON:0004139,1.63e-17,18;UBERON:0004291,1.63e-17,18;UBERON:0004535,8.60e-14,23;UBERON:0001009,8.60e-14,23;UBERON:0004872,1.04e-09,33;UBERON:0003103,1.65e-07,43;UBERON:0003914,6.90e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,0.734187008646726,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,1.80081605225163,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.530083353332288,2.26714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0,0.258937883647172,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.808834249737046,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0.260240885925407,0,0,0,0.272145996605311,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0,0,1.24275463521301,0.938104239924385,0.900310307305074,0.946978942340841,1.18058539048442,0.925602677324269,1.16266972375204,0.804820204198858,0.934122738937356,0.493679549740441,0.656669856316381,0.243206428637567,0.146199987425332,0.878200461164203,0.402619256281115,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.169745085775188,0,0.167506257441816,0.714130922658041,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0,0,0,0,0.655739781506702,0.252470927204373,0,0,0.430846795465598,0.477937595905104,0,0,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0.258717367565509,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,0,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.632671987162271,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0,0,0,0.747582730219894,0.992750942742586,0,0.387479470433193,0.337912250981556,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.38581844092741,0,0.588795680537589,0,0,0.476872379894642,0,0.282328141245992,0.338458431566706,0,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0.382576664137687,1.32354851471709,0.231867835620421 | |||
|short_description=p14@Fam198b | |||
}} |
Revision as of 02:34, 14 September 2013
Short description: | p14@Fam198b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Fam198b_5end |
Coexpression cluster: | NA |
Association with transcript: | 182bp_to_ENSMUST00000029567, NM_133187, uc008pny.2_5end |
EntrezGene: | Fam198b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.59e-17 | 3 |
striated muscle cell | 1.59e-17 | 3 |
cardiac muscle cell | 1.59e-17 | 3 |
cardiac muscle myoblast | 1.59e-17 | 3 |
muscle precursor cell | 2.87e-09 | 6 |
muscle cell | 2.87e-09 | 6 |
myoblast | 2.87e-09 | 6 |
mesodermal cell | 4.45e-08 | 7 |
insulating cell | 9.82e-08 | 2 |
myelin accumulating cell | 9.82e-08 | 2 |
Schwann cell | 9.82e-08 | 2 |
non-myelinating Schwann cell | 9.82e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 9.82e-08 | 2 |
terminal Schwann cell | 9.82e-08 | 2 |
immature Schwann cell | 9.82e-08 | 2 |
Schwann cell precursor | 9.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.63e-17 | 18 |
heart | 1.63e-17 | 18 |
primitive heart tube | 1.63e-17 | 18 |
primary heart field | 1.63e-17 | 18 |
anterior lateral plate mesoderm | 1.63e-17 | 18 |
heart tube | 1.63e-17 | 18 |
heart primordium | 1.63e-17 | 18 |
cardiac mesoderm | 1.63e-17 | 18 |
cardiogenic plate | 1.63e-17 | 18 |
heart rudiment | 1.63e-17 | 18 |
cardiovascular system | 8.60e-14 | 23 |
circulatory system | 8.60e-14 | 23 |
splanchnic layer of lateral plate mesoderm | 1.04e-09 | 33 |
compound organ | 1.65e-07 | 43 |
epithelial tube | 6.90e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.