FFCP PHASE1:Mm9::chr3:87587211..87587233,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18211|HGNC=|MCL_coexpression_id=160|UniProt=|association_with_transcript=-160bp_to_uc012crl.1_5end|description=CAGE_peak_3_at_Ntrk1_5end|id=chr3:87587211..87587233,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!7.55e-18!18;UBERON:0005564!7.55e-18!18;UBERON:0004176!2.41e-16!17;UBERON:0009196!2.41e-16!17;UBERON:0009117!2.41e-16!17;UBERON:0000464!5.05e-16!57;UBERON:0002323!6.44e-16!37;UBERON:0004458!6.44e-16!37;UBERON:0003886!2.52e-15!38;UBERON:0002553!9.20e-15!39;UBERON:0003133!6.47e-14!24;UBERON:0000473!7.13e-13!14;UBERON:0005156!1.74e-12!26;UBERON:0000990!1.74e-12!26;UBERON:0003135!8.23e-12!15;UBERON:0003101!6.96e-11!16;UBERON:0000079!6.96e-11!16;UBERON:0000466!4.13e-10!79|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.13e-38,18;UBERON:0005564,1.13e-38,18;UBERON:0000473,3.50e-38,14;UBERON:0003135,1.18e-35,15;UBERON:0003101,1.93e-33,16;UBERON:0000079,1.93e-33,16;UBERON:0004176,1.73e-31,17;UBERON:0009196,1.73e-31,17;UBERON:0009117,1.73e-31,17;UBERON:0003133,4.66e-29,24;UBERON:0005156,7.77e-27,26;UBERON:0000990,7.77e-27,26;UBERON:0002323,6.84e-19,37;UBERON:0004458,6.84e-19,37;UBERON:0003886,2.14e-18,38;UBERON:0002553,6.32e-18,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0.691846491768175,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2220723662038,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,1.39323986772945,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.913988100877831,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,1.19613236835183,1.65458490457098,1.94451188344048,4.00395452780966,2.19642963138012,2.46450201156083,0.39061315453185,0.734015410979976,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0.526139422875686,0,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p3@Ntrk1}} | ||
|EntrezGene=18211 | |||
|HGNC= | |||
|MCL_coexpression_id=160 | |||
|UniProt= | |||
|association_with_transcript=-160bp_to_uc012crl.1_5end | |||
|description=CAGE_peak_3_at_Ntrk1_5end | |||
|id=chr3:87587211..87587233,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!7.55e-18!18;UBERON:0005564!7.55e-18!18;UBERON:0004176!2.41e-16!17;UBERON:0009196!2.41e-16!17;UBERON:0009117!2.41e-16!17;UBERON:0000464!5.05e-16!57;UBERON:0002323!6.44e-16!37;UBERON:0004458!6.44e-16!37;UBERON:0003886!2.52e-15!38;UBERON:0002553!9.20e-15!39;UBERON:0003133!6.47e-14!24;UBERON:0000473!7.13e-13!14;UBERON:0005156!1.74e-12!26;UBERON:0000990!1.74e-12!26;UBERON:0003135!8.23e-12!15;UBERON:0003101!6.96e-11!16;UBERON:0000079!6.96e-11!16;UBERON:0000466!4.13e-10!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.13e-38,18;UBERON:0005564,1.13e-38,18;UBERON:0000473,3.50e-38,14;UBERON:0003135,1.18e-35,15;UBERON:0003101,1.93e-33,16;UBERON:0000079,1.93e-33,16;UBERON:0004176,1.73e-31,17;UBERON:0009196,1.73e-31,17;UBERON:0009117,1.73e-31,17;UBERON:0003133,4.66e-29,24;UBERON:0005156,7.77e-27,26;UBERON:0000990,7.77e-27,26;UBERON:0002323,6.84e-19,37;UBERON:0004458,6.84e-19,37;UBERON:0003886,2.14e-18,38;UBERON:0002553,6.32e-18,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0.691846491768175,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2220723662038,0.124406970610093,0,0,0,0.229902104433473,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,1.39323986772945,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.913988100877831,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,1.19613236835183,1.65458490457098,1.94451188344048,4.00395452780966,2.19642963138012,2.46450201156083,0.39061315453185,0.734015410979976,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0.526139422875686,0,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p3@Ntrk1 | |||
}} |
Revision as of 02:43, 14 September 2013
Short description: | p3@Ntrk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ntrk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:160 |
Association with transcript: | -160bp_to_uc012crl.1_5end |
EntrezGene: | Ntrk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 1.13e-38 | 18 |
gonad primordium | 1.13e-38 | 18 |
testis | 3.50e-38 | 14 |
male reproductive organ | 1.18e-35 | 15 |
male organism | 1.93e-33 | 16 |
male reproductive system | 1.93e-33 | 16 |
external genitalia | 1.73e-31 | 17 |
indifferent external genitalia | 1.73e-31 | 17 |
indifferent gonad | 1.73e-31 | 17 |
reproductive organ | 4.66e-29 | 24 |
reproductive structure | 7.77e-27 | 26 |
reproductive system | 7.77e-27 | 26 |
body cavity | 6.84e-19 | 37 |
body cavity or lining | 6.84e-19 | 37 |
body cavity precursor | 2.14e-18 | 38 |
anatomical cavity | 6.32e-18 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.