FFCP PHASE1:Mm9::chr3:89763068..89763078,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=77|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:89763068..89763078,-|id=chr3:89763068..89763078,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.47e-25!18;UBERON:0005564!1.47e-25!18;UBERON:0000473!1.49e-23!14;UBERON:0004176!7.62e-23!17;UBERON:0009196!7.62e-23!17;UBERON:0009117!7.62e-23!17;UBERON:0003135!7.41e-22!15;UBERON:0003101!2.26e-20!16;UBERON:0000079!2.26e-20!16;UBERON:0003133!1.46e-18!24;UBERON:0005156!6.01e-17!26;UBERON:0000990!6.01e-17!26;UBERON:0002323!3.20e-13!37;UBERON:0004458!3.20e-13!37;UBERON:0003886!8.38e-13!38;UBERON:0002553!2.09e-12!39;UBERON:0000464!1.17e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.89e-56,14;UBERON:0003135,5.06e-52,15;UBERON:0003101,8.92e-49,16;UBERON:0000079,8.92e-49,16;UBERON:0004176,6.54e-46,17;UBERON:0009196,6.54e-46,17;UBERON:0009117,6.54e-46,17;UBERON:0000991,2.31e-43,18;UBERON:0005564,2.31e-43,18;UBERON:0003133,1.59e-32,24;UBERON:0005156,5.08e-30,26;UBERON:0000990,5.08e-30,26;UBERON:0002323,4.54e-21,37;UBERON:0004458,4.54e-21,37;UBERON:0003886,1.64e-20,38;UBERON:0002553,5.55e-20,39|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897099276263873,1.65458490457098,1.55560950675238,1.29159823477731,1.35164900392623,1.29092962510329,1.95306577265925,5.66240459898839,1.44950472495604,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr3:89763068..89763078,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:89763068..89763078,- | |||
|id=chr3:89763068..89763078,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.47e-25!18;UBERON:0005564!1.47e-25!18;UBERON:0000473!1.49e-23!14;UBERON:0004176!7.62e-23!17;UBERON:0009196!7.62e-23!17;UBERON:0009117!7.62e-23!17;UBERON:0003135!7.41e-22!15;UBERON:0003101!2.26e-20!16;UBERON:0000079!2.26e-20!16;UBERON:0003133!1.46e-18!24;UBERON:0005156!6.01e-17!26;UBERON:0000990!6.01e-17!26;UBERON:0002323!3.20e-13!37;UBERON:0004458!3.20e-13!37;UBERON:0003886!8.38e-13!38;UBERON:0002553!2.09e-12!39;UBERON:0000464!1.17e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.89e-56,14;UBERON:0003135,5.06e-52,15;UBERON:0003101,8.92e-49,16;UBERON:0000079,8.92e-49,16;UBERON:0004176,6.54e-46,17;UBERON:0009196,6.54e-46,17;UBERON:0009117,6.54e-46,17;UBERON:0000991,2.31e-43,18;UBERON:0005564,2.31e-43,18;UBERON:0003133,1.59e-32,24;UBERON:0005156,5.08e-30,26;UBERON:0000990,5.08e-30,26;UBERON:0002323,4.54e-21,37;UBERON:0004458,4.54e-21,37;UBERON:0003886,1.64e-20,38;UBERON:0002553,5.55e-20,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897099276263873,1.65458490457098,1.55560950675238,1.29159823477731,1.35164900392623,1.29092962510329,1.95306577265925,5.66240459898839,1.44950472495604,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr3:89763068..89763078,- | |||
}} |
Revision as of 02:53, 14 September 2013
Short description: | p@chr3:89763068..89763078, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:89763068..89763078, - |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 9.89e-56 | 14 |
male reproductive organ | 5.06e-52 | 15 |
male organism | 8.92e-49 | 16 |
male reproductive system | 8.92e-49 | 16 |
external genitalia | 6.54e-46 | 17 |
indifferent external genitalia | 6.54e-46 | 17 |
indifferent gonad | 6.54e-46 | 17 |
gonad | 2.31e-43 | 18 |
gonad primordium | 2.31e-43 | 18 |
reproductive organ | 1.59e-32 | 24 |
reproductive structure | 5.08e-30 | 26 |
reproductive system | 5.08e-30 | 26 |
body cavity | 4.54e-21 | 37 |
body cavity or lining | 4.54e-21 | 37 |
body cavity precursor | 1.64e-20 | 38 |
anatomical cavity | 5.55e-20 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.