FFCP PHASE1:Mm9::chr3:95021663..95021687,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=213054|HGNC=|MCL_coexpression_id=973|UniProt=Q8C2T8|association_with_transcript=0bp_to_ENSMUST00000107204_5end|description=CAGE_peak_3_at_Gabpb2_5end|id=chr3:95021663..95021687,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.14e-11!130;UBERON:0000925!3.14e-11!130;UBERON:0006595!3.14e-11!130;UBERON:0004921!7.23e-11!126;UBERON:0004185!7.23e-11!126;UBERON:0001007!2.25e-10!128;UBERON:0001555!2.25e-10!128;UBERON:0007026!2.25e-10!128;UBERON:0000077!2.29e-09!97;UBERON:0001048!3.32e-09!147;UBERON:0001041!5.07e-09!92;UBERON:0000926!1.29e-08!193;UBERON:0004120!1.29e-08!193;UBERON:0006603!1.29e-08!193;UBERON:0004177!1.16e-07!29;UBERON:0003104!8.88e-07!131;UBERON:0009142!8.88e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.81e-11,118;UBERON:0000925,3.81e-11,118;UBERON:0006595,3.81e-11,118;UBERON:0004921,7.54e-11,114;UBERON:0001007,2.79e-10,116;UBERON:0001555,2.79e-10,116;UBERON:0007026,2.79e-10,116;UBERON:0001041,3.29e-09,80;UBERON:0001048,1.43e-08,134;UBERON:0004177,4.51e-08,29;UBERON:0005057,4.51e-08,29;UBERON:0000077,2.58e-07,35|phase1_expression=0.640595388419176,1.39590163055744,0.454999239389536,1.81478526784098,2.50447864973174,1.84667199103079,3.03696432774183,3.22808308603941,1.12630977721333,1.40438715793196,2.22583358693156,4.14815226775749,4.10881751834894,3.67165690159789,2.99798785634096,5.4668322195253,5.59649502502517,3.15462165358238,3.29074640653773,2.54633791078818,2.63634199468316,5.36171136484781,3.91799683708403,2.07990149631429,0.68822784320151,1.72269589234506,1.7230479846363,1.939241094173,3.23039813075836,3.78045194639896,2.66076612786366,5.71527606113668,6.1506478758457,0,2.59966457776147,2.1610503896604,1.63335485009895,4.18531630736908,2.3440060335714,5.23523743973798,0.588231488031014,1.36609096991689,1.45653105909346,0.377690453926732,1.52065396829272,2.0190142737785,0,0.436050312760893,0.219686182734472,0,0.55994568650145,0,2.34895648480831,2.17608642603403,2.35265659399725,0.771778308107841,1.14613375975503,1.54701627683233,0.404632921719196,0,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0,1.65903379693564,0.810035629990144,0.630974884054146,0.856952953211411,0.883474163806454,0.122490799214954,0.958454710182364,0,1.10115880999389,0.766124028511126,0.307213066512487,0.395658863190582,1.00636407962651,0.52091337055676,0.837548997004143,1.68828783009504,0.916789486660861,0.589257170947335,0.142371680799103,0.745597783301202,1.36307147999731,1.36028808192214,0.869593466105033,0,0,0.539703191637817,1.29955283489534,1.34408066129201,1.68533304158102,2.38602451609281,1.03914401841148,2.82671659608272,1.12674735821344,0,0,0,1.73192832808971,1.52015919285059,3.0331466700887,2.05530983494308,9.32176381129818,0.593768556259299,1.73485326766136,2.43572382649713,1.15307748628029,0.60289056221049,2.82212897125692,1.38233250462643,4.20231445148436,2.02439099687876,2.65383165584962,4.20593809863264,7.95029466457417,7.27312879702833,9.31958806090611,2.34224637609238,3.14170060220183,2.81002760729451,3.35482348616577,2.99951365496704,2.66847476853436,0.149790639404823,0.915001205637253,0.502617408451458,0.695297280769106,0.767146371990992,0.83115217823824,0.973447578406546,4.88828946481518,6.09594155989456,2.0217820674694,3.36706969418358,3.513251959993,1.83921683546778,1.80062129805349,1.9591626318643,2.38127747029647,3.20284300712124,2.52994656311268,1.81092359517311,4.74249584452253,4.72765200419548,4.39877810409872,1.31517439456545,3.33656699070717,2.43776516565517,3.70407845534298,3.98068533636986,2.80885274925294,2.83082697826187,4.54661599032948,3.10688658803253,2.34526059981096,1.44049649168812,2.60419209143731,1.57411385397923,2.1597395804233,2.79040733700489,1.3413670069981,1.86824547787471,1.48103864922132,1.31333971263276,1.05389452409612,1.31579988682799,0.878200461164203,0.671032093801859,1.26173969138476,0.514523061896422,1.98251269790279,2.64450566663544,4.47905326123991,3.94802342162745,5.15469845288373,3.63030344322017,4.00280478920767,2.66315876557583,3.32170343081158,2.14108641141214,2.76468729680296,2.58643413653496,2.14460495831032,4.49409704327111,4.10662294761919,2.38969527905241,1.51734320762465,3.88444942873078,1.1270773567308,4.07302655690629,3.49114476901726,2.52488951605147,1.64414996523069,1.47610147979602,1.255989822731,0.987177311374404,0.592905254174298,6.34011401721157,5.50365186316968,9.44420872016386,6.28866376304359,9.40590923034426,4.07401362850272,3.16465751195892,4.05338066937588,4.11842119782122,12.9391385874619,4.83783231969054,4.05648975048929,1.51547326768267,1.61457672169721,0.482443521363367,4.24932337383191,3.60033682363921,4.72598431681875,5.26209765903083,3.98973422090454,5.3602002381381,3.09456733151818,3.12213836572478,2.67979744980525,3.98636441367795,2.07291199254733,2.13022309130459,1.89953480052485,1.44649058581512,0,1.08781136763742,3.44234991113325,5.794671672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| ||
|EntrezGene=213054 | |||
|HGNC= | |||
|MCL_coexpression_id=973 | |||
|UniProt=Q8C2T8 | |||
|association_with_transcript=0bp_to_ENSMUST00000107204_5end | |||
|description=CAGE_peak_3_at_Gabpb2_5end | |||
|id=chr3:95021663..95021687,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.14e-11!130;UBERON:0000925!3.14e-11!130;UBERON:0006595!3.14e-11!130;UBERON:0004921!7.23e-11!126;UBERON:0004185!7.23e-11!126;UBERON:0001007!2.25e-10!128;UBERON:0001555!2.25e-10!128;UBERON:0007026!2.25e-10!128;UBERON:0000077!2.29e-09!97;UBERON:0001048!3.32e-09!147;UBERON:0001041!5.07e-09!92;UBERON:0000926!1.29e-08!193;UBERON:0004120!1.29e-08!193;UBERON:0006603!1.29e-08!193;UBERON:0004177!1.16e-07!29;UBERON:0003104!8.88e-07!131;UBERON:0009142!8.88e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.81e-11,118;UBERON:0000925,3.81e-11,118;UBERON:0006595,3.81e-11,118;UBERON:0004921,7.54e-11,114;UBERON:0001007,2.79e-10,116;UBERON:0001555,2.79e-10,116;UBERON:0007026,2.79e-10,116;UBERON:0001041,3.29e-09,80;UBERON:0001048,1.43e-08,134;UBERON:0004177,4.51e-08,29;UBERON:0005057,4.51e-08,29;UBERON:0000077,2.58e-07,35 | |||
|phase1_expression=0.640595388419176,1.39590163055744,0.454999239389536,1.81478526784098,2.50447864973174,1.84667199103079,3.03696432774183,3.22808308603941,1.12630977721333,1.40438715793196,2.22583358693156,4.14815226775749,4.10881751834894,3.67165690159789,2.99798785634096,5.4668322195253,5.59649502502517,3.15462165358238,3.29074640653773,2.54633791078818,2.63634199468316,5.36171136484781,3.91799683708403,2.07990149631429,0.68822784320151,1.72269589234506,1.7230479846363,1.939241094173,3.23039813075836,3.78045194639896,2.66076612786366,5.71527606113668,6.1506478758457,0,2.59966457776147,2.1610503896604,1.63335485009895,4.18531630736908,2.3440060335714,5.23523743973798,0.588231488031014,1.36609096991689,1.45653105909346,0.377690453926732,1.52065396829272,2.0190142737785,0,0.436050312760893,0.219686182734472,0,0.55994568650145,0,2.34895648480831,2.17608642603403,2.35265659399725,0.771778308107841,1.14613375975503,1.54701627683233,0.404632921719196,0,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0,1.65903379693564,0.810035629990144,0.630974884054146,0.856952953211411,0.883474163806454,0.122490799214954,0.958454710182364,0,1.10115880999389,0.766124028511126,0.307213066512487,0.395658863190582,1.00636407962651,0.52091337055676,0.837548997004143,1.68828783009504,0.916789486660861,0.589257170947335,0.142371680799103,0.745597783301202,1.36307147999731,1.36028808192214,0.869593466105033,0,0,0.539703191637817,1.29955283489534,1.34408066129201,1.68533304158102,2.38602451609281,1.03914401841148,2.82671659608272,1.12674735821344,0,0,0,1.73192832808971,1.52015919285059,3.0331466700887,2.05530983494308,9.32176381129818,0.593768556259299,1.73485326766136,2.43572382649713,1.15307748628029,0.60289056221049,2.82212897125692,1.38233250462643,4.20231445148436,2.02439099687876,2.65383165584962,4.20593809863264,7.95029466457417,7.27312879702833,9.31958806090611,2.34224637609238,3.14170060220183,2.81002760729451,3.35482348616577,2.99951365496704,2.66847476853436,0.149790639404823,0.915001205637253,0.502617408451458,0.695297280769106,0.767146371990992,0.83115217823824,0.973447578406546,4.88828946481518,6.09594155989456,2.0217820674694,3.36706969418358,3.513251959993,1.83921683546778,1.80062129805349,1.9591626318643,2.38127747029647,3.20284300712124,2.52994656311268,1.81092359517311,4.74249584452253,4.72765200419548,4.39877810409872,1.31517439456545,3.33656699070717,2.43776516565517,3.70407845534298,3.98068533636986,2.80885274925294,2.83082697826187,4.54661599032948,3.10688658803253,2.34526059981096,1.44049649168812,2.60419209143731,1.57411385397923,2.1597395804233,2.79040733700489,1.3413670069981,1.86824547787471,1.48103864922132,1.31333971263276,1.05389452409612,1.31579988682799,0.878200461164203,0.671032093801859,1.26173969138476,0.514523061896422,1.98251269790279,2.64450566663544,4.47905326123991,3.94802342162745,5.15469845288373,3.63030344322017,4.00280478920767,2.66315876557583,3.32170343081158,2.14108641141214,2.76468729680296,2.58643413653496,2.14460495831032,4.49409704327111,4.10662294761919,2.38969527905241,1.51734320762465,3.88444942873078,1.1270773567308,4.07302655690629,3.49114476901726,2.52488951605147,1.64414996523069,1.47610147979602,1.255989822731,0.987177311374404,0.592905254174298,6.34011401721157,5.50365186316968,9.44420872016386,6.28866376304359,9.40590923034426,4.07401362850272,3.16465751195892,4.05338066937588,4.11842119782122,12.9391385874619,4.83783231969054,4.05648975048929,1.51547326768267,1.61457672169721,0.482443521363367,4.24932337383191,3.60033682363921,4.72598431681875,5.26209765903083,3.98973422090454,5.3602002381381,3.09456733151818,3.12213836572478,2.67979744980525,3.98636441367795,2.07291199254733,2.13022309130459,1.89953480052485,1.44649058581512,0,1.08781136763742,3.44234991113325,5.79467167239938,0.481651769963376,0.586058432961016,3.11476396215683,1.26235463602186,1.26203287766503,1.56175497718655,1.50796378412959,0.955875191810208,1.78238939265915,1.41538265394416,0.809621403349789,0.876767573733936,0.790575555893047,1.60660658210904,1.70328102249922,2.13678724400706,3.58351310577867,2.3095817216155,1.32745138339963,2.18502572539483,3.32555912661226,3.39489143560617,2.36241514304618,3.68922177532713,3.35956781118687,2.90826983582004,3.20847640546249,3.16036757935816,2.10837217149998,0,1.36175842301515,3.42116078659489,1.03486947026204,2.14337035031592,3.54680467284547,1.60531935841864,1.31639216481697,0.304464949114599,7.97883807416615,6.14313005505079,1.54369878638473,3.46261131177108,4.52100394748536,4.76472106932431,5.96861720015682,4.10352249362653,3.49777003955821,1.11255181206306,7.00570611271196,3.714963623338,7.59297562215818,8.85331747922048,13.3960343166605,8.46479240864134,2.71965487990169,2.23922323717853,2.07299960706636,0.954670618015114,3.47969592939249,4.67634774391752,2.70013352054503,3.13632444021703,4.14888871117737,4.31565908431426,2.89287095038676,3.66458318777641,2.85152941241944,1.24267862617385,1.69107881605257,5.68162874967119,4.798296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| |||
|short_description=p3@Gabpb2 | |||
}} |
Revision as of 03:03, 14 September 2013
Short description: | p3@Gabpb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gabpb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:973 |
Association with transcript: | 0bp_to_ENSMUST00000107204_5end |
EntrezGene: | Gabpb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.81e-11 | 118 |
endoderm | 3.81e-11 | 118 |
presumptive endoderm | 3.81e-11 | 118 |
subdivision of digestive tract | 7.54e-11 | 114 |
digestive system | 2.79e-10 | 116 |
digestive tract | 2.79e-10 | 116 |
primitive gut | 2.79e-10 | 116 |
foregut | 3.29e-09 | 80 |
primordium | 1.43e-08 | 134 |
hemopoietic organ | 4.51e-08 | 29 |
immune organ | 4.51e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 2.58e-07 | 35 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.