FFCP PHASE1:Mm9::chr3:95462552..95462582,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:95462552..95462582,-|id=chr3:95462552..95462582,-|ontology_enrichment_celltype=CL:0000144!3.18e-12!121;CL:0000012!3.18e-12!121;CL:0002371!8.00e-11!118;CL:0000063!1.33e-10!66;CL:0000034!1.45e-10!97;CL:0000988!1.62e-10!32;CL:0002032!1.62e-10!32;CL:0000037!1.62e-10!32;CL:0000566!1.62e-10!32;CL:0000837!1.62e-10!32;CL:0000548!2.07e-09!115;CL:0000004!2.07e-09!115;CL:0000255!2.07e-09!115;CL:0000723!2.25e-09!91;CL:0000048!2.25e-09!91;CL:0000738!1.78e-07!17;CL:0002087!1.78e-07!17;CL:0002320!1.91e-07!46;CL:0000134!1.91e-07!46;CL:0002031!3.21e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,2.31e-11,32;CL:0002032,2.31e-11,32;CL:0000037,2.31e-11,32;CL:0000837,2.31e-11,32;CL:0000034,1.33e-10,97;CL:0000723,2.08e-09,91;CL:0000048,2.08e-09,91;CL:0002320,2.03e-08,46;CL:0000134,2.03e-08,46;CL:0000738,4.45e-08,17;CL:0002087,4.45e-08,17;CL:0002031,9.65e-08,25;CL:0000219,3.48e-07,54;CL:0000542,6.89e-07,13;CL:0000051,6.89e-07,13;CL:0000838,8.87e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.91e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.03e-08,46|phase1_expression=3.68342348341026,4.18770489167233,2.72999543633722,7.86406949397758,9.01612313903425,1.00727563147134,3.03696432774183,5.16493293766305,7.32101355188667,9.12851652655775,3.4243593645101,3.11111420081812,3.42401459862411,2.36035086531293,0.999329285446988,1.01237633694913,1.39912375625629,2.68142840554502,2.4680598049033,1.27316895539409,0.935476191661768,1.68794617041505,1.82839852397255,1.11994695955385,4.12936705920906,5.16808767703518,0.430761996159075,3.01659725760245,1.90023419456374,2.52030129759931,3.10422714917427,6.98533740805594,3.69038872550742,0,1.73310971850765,1.99481574430191,1.63335485009895,15.0671387065287,21.8773896466664,14.1351410872926,69.9995470756907,25.9557284284209,16.5073520030592,1.1330713617802,0.912392380975631,1.65192076945513,1.56478268869608,1.09012578190223,0.219686182734472,1.36100929351998,0.55994568650145,1.43752564364972,2.18117387875057,4.35217285206807,2.68875039313971,0.257259436035947,0.286533439938757,1.54701627683233,1.01158230429799,1.05798195854407,2.53532561402472,0.677689064138264,0,2.6996991518442,2.96659908770092,2.1314403448383,1.79760066311043,1.15265491596466,0.933206510776299,1.4850653216486,1.05162480675691,0.571301968807607,0.883474163806454,1.10241719293459,1.24599112323707,2.75765635983006,1.10115880999389,0.766124028511126,0.921639199537461,0.791317726381163,1.28082701043374,3.12548022334056,0.837548997004143,2.25105044012672,1.37518422999129,0,0.711858403995515,1.4911955666024,0.605809546665472,1.13357340160178,13.3337664802772,0,2.03991400112325,0.539703191637817,0,0.896053774194671,0.702222100658759,0.852151612890289,1.55871602761721,0.35333957451034,1.97180787687353,0,0,7.11066703153331,0.865964164044856,3.54703811665138,3.0331466700887,0.68510327831436,2.33044095282455,1.03909497345377,1.38788261412909,2.13125834818499,1.15307748628029,1.65794904607885,0,0.628332956648377,1.73036477414062,0.433798070759735,2.65383165584962,0.647067399789637,1.32504911076236,2.42437626567611,0,2.04946557908083,1.04723353406728,0.255457055208591,6.58983184782562,8.39863823390771,7.24300294316469,0.898743836428936,0,1.63350657746724,0.869121600961382,0.511430914660661,0.62336413367868,0.648965052271031,1.2220723662038,1.49288364732112,0.505445516867349,0.631325567659422,1.56144531555244,1.37941262660084,1.44049703844279,2.26057226753573,1.2246569847239,1.0249097622788,1.49922759295566,1.29351685369508,2.80238390812695,1.51284864134255,1.75951124163949,1.09597866213787,0.556094498451196,1.0447564995665,0.61734640922383,1.79130840136644,3.51106593656617,3.60287069960601,4.83077948972507,0.621377317606506,0.469052119962192,0.540186184383045,0.23674473558521,0.787056926989615,0.462801338662135,0.930135779001631,0,0.934122738937356,0.658239399653922,0.32833492815819,0.324275238183423,0,0.658650345873152,0.536825675041487,1.05144974282064,1.74937841044784,2.31293148088659,0,1.70630600428187,0.696710015581316,0.902072229254653,0.80673409849337,0.667134131534611,0.380451252225118,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.58489226135736,0,0.648414149624083,1.7922714592893,1.13800740571849,0.456994050438915,0,1.01825663922657,0.969762435838129,0.561086559122548,0.758838445491087,0.442830443938806,0.941992367048249,0.616985819609003,1.48226313543574,1.50160595144485,0.982794975566015,1.34917267430912,1.82574109249653,2.17059443777175,1.52775511068852,1.72617682470486,0.648540907100142,1.37280706594041,2.87536413054709,0,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,2.58654466233247,2.4633883530163,0.814824882210129,1.52770577197669,0.938760993154008,1.67506257441816,1.90434912708811,1.17080188714679,0.788175720530955,1.10732344824387,0.318909537314974,1.3109065177259,1.38147985492716,1.73578870297814,6.03165135757089,8.70249094109935,0.491764273019036,1.37968373152366,0.642202359951168,0.820481806145422,0.327869890753351,0.504941854408746,3.47059041357882,2.34263246577983,2.36965737506079,0.955875191810208,2.67358408898873,3.11384183867716,4.45291771842384,1.16902343164525,1.18586333383957,0.963963949265421,0.709700426041343,1.06839362200353,0.488660878060728,0.329940245945071,1.32745138339963,0.971122544619926,0.302323556964751,1.32023555829129,1.47650946440386,0.922305443831782,1.03371317267288,1.45413491791002,0,0.316036757935816,0,1.03135543248187,2.38307724027652,2.16073312837572,2.58717367565509,1.92903331528433,1.24138163549592,1.60531935841864,1.81003922662333,3.04464949114599,0.469343416127421,3.38931313382112,0.441056796109924,3.46261131177108,1.13025098687134,0.663442174209714,0.358117032009409,0.164140899745061,0.874442509889552,0.18542530201051,2.22132145037209,0.619160603889667,2.40752885580625,1.13021074202815,1.6403307326523,2.97411625168479,8.15896463970505,5.318155188299,6.90999869022119,0,1.58167996790568,1.62655573701479,0.648032044930808,0,1.31017538247707,0.809186078308924,0.495920734352016,1.04702376793612,1.94422459937689,0,0.56369293868419,1.19613236835183,0.992750942742586,0.388902376688095,0.774958940866387,0.675824501963113,1.05621514781179,1.3020438484395,1.15345278868282,3.38217769156408,3.74439008135225,1.26404448251271,1.01362607645082,0.513554785824136,0.389762468933385,0.895133478337407,1.39076948346885,0.841368146639782,1.03382669022204,0.807731599585181,0.838274873204998,1.31074040677893,1.36441033035653,1.25075394132428,2.45441494581295,0.226730383615211,0.665957860122194,1.16628013592318,1.51096154727671,0.965947970160952,0.375364950902364,1.64836461840539,0.643105137237198,0,0,0.460325236507177,0,1.71853182343688,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,1.86817225651518,1.99512436700516,1.19513524027894,0.243106717068294,1.25767897576789,1.10306105070008,1.11123363900808,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,1.50901073108861,0.561849044819294,0.576226371643824,0.689225627467359,0.476293691283074,0.463537303779422,1.54327376370964,1.23625770240992,0.735994600671987,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.676916863133412,0.914639864363863,0.526139422875686,0.679020569229309,0,0.711810108745045,0.886540341380071,0.818462086339379,1.08455788830176,0.578719832943424,1.49886346762768,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.927471342481686|short_description=p@chr3:95462552..95462582,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:95462552..95462582,- | |||
|id=chr3:95462552..95462582,- | |||
|ontology_enrichment_celltype=CL:0000144!3.18e-12!121;CL:0000012!3.18e-12!121;CL:0002371!8.00e-11!118;CL:0000063!1.33e-10!66;CL:0000034!1.45e-10!97;CL:0000988!1.62e-10!32;CL:0002032!1.62e-10!32;CL:0000037!1.62e-10!32;CL:0000566!1.62e-10!32;CL:0000837!1.62e-10!32;CL:0000548!2.07e-09!115;CL:0000004!2.07e-09!115;CL:0000255!2.07e-09!115;CL:0000723!2.25e-09!91;CL:0000048!2.25e-09!91;CL:0000738!1.78e-07!17;CL:0002087!1.78e-07!17;CL:0002320!1.91e-07!46;CL:0000134!1.91e-07!46;CL:0002031!3.21e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.31e-11,32;CL:0002032,2.31e-11,32;CL:0000037,2.31e-11,32;CL:0000837,2.31e-11,32;CL:0000034,1.33e-10,97;CL:0000723,2.08e-09,91;CL:0000048,2.08e-09,91;CL:0002320,2.03e-08,46;CL:0000134,2.03e-08,46;CL:0000738,4.45e-08,17;CL:0002087,4.45e-08,17;CL:0002031,9.65e-08,25;CL:0000219,3.48e-07,54;CL:0000542,6.89e-07,13;CL:0000051,6.89e-07,13;CL:0000838,8.87e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.91e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.03e-08,46 | |||
|phase1_expression=3.68342348341026,4.18770489167233,2.72999543633722,7.86406949397758,9.01612313903425,1.00727563147134,3.03696432774183,5.16493293766305,7.32101355188667,9.12851652655775,3.4243593645101,3.11111420081812,3.42401459862411,2.36035086531293,0.999329285446988,1.01237633694913,1.39912375625629,2.68142840554502,2.4680598049033,1.27316895539409,0.935476191661768,1.68794617041505,1.82839852397255,1.11994695955385,4.12936705920906,5.16808767703518,0.430761996159075,3.01659725760245,1.90023419456374,2.52030129759931,3.10422714917427,6.98533740805594,3.69038872550742,0,1.73310971850765,1.99481574430191,1.63335485009895,15.0671387065287,21.8773896466664,14.1351410872926,69.9995470756907,25.9557284284209,16.5073520030592,1.1330713617802,0.912392380975631,1.65192076945513,1.56478268869608,1.09012578190223,0.219686182734472,1.36100929351998,0.55994568650145,1.43752564364972,2.18117387875057,4.35217285206807,2.68875039313971,0.257259436035947,0.286533439938757,1.54701627683233,1.01158230429799,1.05798195854407,2.53532561402472,0.677689064138264,0,2.6996991518442,2.96659908770092,2.1314403448383,1.79760066311043,1.15265491596466,0.933206510776299,1.4850653216486,1.05162480675691,0.571301968807607,0.883474163806454,1.10241719293459,1.24599112323707,2.75765635983006,1.10115880999389,0.766124028511126,0.921639199537461,0.791317726381163,1.28082701043374,3.12548022334056,0.837548997004143,2.25105044012672,1.37518422999129,0,0.711858403995515,1.4911955666024,0.605809546665472,1.13357340160178,13.3337664802772,0,2.03991400112325,0.539703191637817,0,0.896053774194671,0.702222100658759,0.852151612890289,1.55871602761721,0.35333957451034,1.97180787687353,0,0,7.11066703153331,0.865964164044856,3.54703811665138,3.0331466700887,0.68510327831436,2.33044095282455,1.03909497345377,1.38788261412909,2.13125834818499,1.15307748628029,1.65794904607885,0,0.628332956648377,1.73036477414062,0.433798070759735,2.65383165584962,0.647067399789637,1.32504911076236,2.42437626567611,0,2.04946557908083,1.04723353406728,0.255457055208591,6.58983184782562,8.39863823390771,7.24300294316469,0.898743836428936,0,1.63350657746724,0.869121600961382,0.511430914660661,0.62336413367868,0.648965052271031,1.2220723662038,1.49288364732112,0.505445516867349,0.631325567659422,1.56144531555244,1.37941262660084,1.44049703844279,2.26057226753573,1.2246569847239,1.0249097622788,1.49922759295566,1.29351685369508,2.80238390812695,1.51284864134255,1.75951124163949,1.09597866213787,0.556094498451196,1.0447564995665,0.61734640922383,1.79130840136644,3.51106593656617,3.60287069960601,4.83077948972507,0.621377317606506,0.469052119962192,0.540186184383045,0.23674473558521,0.787056926989615,0.462801338662135,0.930135779001631,0,0.934122738937356,0.658239399653922,0.32833492815819,0.324275238183423,0,0.658650345873152,0.536825675041487,1.05144974282064,1.74937841044784,2.31293148088659,0,1.70630600428187,0.696710015581316,0.902072229254653,0.80673409849337,0.667134131534611,0.380451252225118,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.58489226135736,0,0.648414149624083,1.7922714592893,1.13800740571849,0.456994050438915,0,1.01825663922657,0.969762435838129,0.561086559122548,0.758838445491087,0.442830443938806,0.941992367048249,0.616985819609003,1.48226313543574,1.50160595144485,0.982794975566015,1.34917267430912,1.82574109249653,2.17059443777175,1.52775511068852,1.72617682470486,0.648540907100142,1.37280706594041,2.87536413054709,0,0.312037673114561,0.757736633841335,0.538192240565737,0.964887042726734,2.58654466233247,2.4633883530163,0.814824882210129,1.52770577197669,0.938760993154008,1.67506257441816,1.90434912708811,1.17080188714679,0.788175720530955,1.10732344824387,0.318909537314974,1.3109065177259,1.38147985492716,1.73578870297814,6.03165135757089,8.70249094109935,0.491764273019036,1.37968373152366,0.642202359951168,0.820481806145422,0.327869890753351,0.504941854408746,3.47059041357882,2.34263246577983,2.36965737506079,0.955875191810208,2.67358408898873,3.11384183867716,4.45291771842384,1.16902343164525,1.18586333383957,0.963963949265421,0.709700426041343,1.06839362200353,0.488660878060728,0.329940245945071,1.32745138339963,0.971122544619926,0.302323556964751,1.32023555829129,1.47650946440386,0.922305443831782,1.03371317267288,1.45413491791002,0,0.316036757935816,0,1.03135543248187,2.38307724027652,2.16073312837572,2.58717367565509,1.92903331528433,1.24138163549592,1.60531935841864,1.81003922662333,3.04464949114599,0.469343416127421,3.38931313382112,0.441056796109924,3.46261131177108,1.13025098687134,0.663442174209714,0.358117032009409,0.164140899745061,0.874442509889552,0.18542530201051,2.22132145037209,0.619160603889667,2.40752885580625,1.13021074202815,1.6403307326523,2.97411625168479,8.15896463970505,5.318155188299,6.90999869022119,0,1.58167996790568,1.62655573701479,0.648032044930808,0,1.31017538247707,0.809186078308924,0.495920734352016,1.04702376793612,1.94422459937689,0,0.56369293868419,1.19613236835183,0.992750942742586,0.388902376688095,0.774958940866387,0.675824501963113,1.05621514781179,1.3020438484395,1.15345278868282,3.38217769156408,3.74439008135225,1.26404448251271,1.01362607645082,0.513554785824136,0.389762468933385,0.895133478337407,1.39076948346885,0.841368146639782,1.03382669022204,0.807731599585181,0.838274873204998,1.31074040677893,1.36441033035653,1.25075394132428,2.45441494581295,0.226730383615211,0.665957860122194,1.16628013592318,1.51096154727671,0.965947970160952,0.375364950902364,1.64836461840539,0.643105137237198,0,0,0.460325236507177,0,1.71853182343688,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,1.86817225651518,1.99512436700516,1.19513524027894,0.243106717068294,1.25767897576789,1.10306105070008,1.11123363900808,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,1.50901073108861,0.561849044819294,0.576226371643824,0.689225627467359,0.476293691283074,0.463537303779422,1.54327376370964,1.23625770240992,0.735994600671987,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.376437521661322,0.676916863133412,0.914639864363863,0.526139422875686,0.679020569229309,0,0.711810108745045,0.886540341380071,0.818462086339379,1.08455788830176,0.578719832943424,1.49886346762768,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.927471342481686 | |||
|short_description=p@chr3:95462552..95462582,- | |||
}} |
Revision as of 03:05, 14 September 2013
Short description: | p@chr3:95462552..95462582, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95462552..95462582, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.31e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.31e-11 | 32 |
hematopoietic stem cell | 2.31e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.31e-11 | 32 |
stem cell | 1.33e-10 | 97 |
somatic stem cell | 2.08e-09 | 91 |
multi fate stem cell | 2.08e-09 | 91 |
connective tissue cell | 2.03e-08 | 46 |
mesenchymal cell | 2.03e-08 | 46 |
leukocyte | 4.45e-08 | 17 |
nongranular leukocyte | 4.45e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 9.65e-08 | 25 |
motile cell | 3.48e-07 | 54 |
lymphocyte | 6.89e-07 | 13 |
common lymphoid progenitor | 6.89e-07 | 13 |
lymphoid lineage restricted progenitor cell | 8.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.03e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.